GenBank_CM000046_Region_301512_302226
1
URA5
Organism: Cryptococcus neoformans var. neoformans B-3501A
2022-06-18T16:06:43
GenBank: <a href="https://www.ncbi.nlm.nih.gov/nuccore/CM000046?report=genbank&log$=nuclalign&blast_rank=1&RID=V9TM1MJH016&from=301512&to=302226">CM000046 Region: 301512..302226</a>
This is the promoter of the Orotidine Monophosphate Pyrophosphorylase.
We did a BLAST with the article's sequence (M34606) and we found two deletions. Thus, the sequence provided here is the updated one, the genomic sequence (CM000046), which has 2 more bp.
2201894
GenBank_CM000046_Region_301512_302226Sequence
1
gatcttggggatggtattgaagacgatccagaaaaagtctctccatccctcccacgttcgctgttcggtttctttgcaaagagcgaagttgctcgacctttgacagaccctaaaatctggtcgtattttgcgttcaaagatcgcttactgcgaccgcgattttttagaggtggattttttgttgcgagagctagcgcatcggataggcatgggtgatatacgtttgcgttccttatgaggggtatcatcagtggcaaattaccgactagatgaagaagacgacctacaccccgctaaccggtgtccgatcgacatgatccacggtgtccaaagcgaagaaggacatgatgattggagttcgcttacctttggtataaaccagtgttgtttctgaagaggtgaggaagaaaatgatctagggcaataacagaaatcgtttgaagaagaagtaaaagaaaagaacacacgtcagacaagcatcatcatcattcattttgaatactcatcacggcaccttcttccttgcatgcgcattattcatgatgagatgctcgcagccgccggatttcggctgcaatcaagaacgatatcgcgtacggcgatgtccgcctccactccatcttccaacaaccaccacagtgcccgataacactacgacgaaaattgttcttttttggatcttgtcgacaacggcgaccaaaacaagaacttgatc
GenBank_CM000046_Region_301512_302226_SBOLDesignerActivity
1
Sophia Garcia de Resende
2021-12-11T18:59:58.909Z
Association
1
SBOLDesigner
3.1
SBOLDesigner CAD Tool
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Samuel Bridge
Chris Myers
Michal Galdzicki
Michael Zhang
John Gennari
Sean Sleight
Bryan Bartley
Evren Sirin