GenBank_CP047908_Region_1244167_1244926
1
APP1
Organism: Cryptococcus neoformans var. grubii H99 (Cryptococcus neoformans serotype A)
2022-06-18T01:05:23
GenBank: <a href="https://www.ncbi.nlm.nih.gov/nucleotide/CP047908.1?report=genbank&log$=nuclalign&blast_rank=2&RID=S042TX5R016&from=1244167&to=1244926"> CP047908 Region: 1244167..1244926</a>
This is the promoter of antiphagocytic protein.
In this article they renamed the previously isolated IP1 to antiphagocytic protein 1 (App1). The chromosome sequence (CP047908) has some SNP's and gaps compared to the article sequence (AF180108). We used the chromosome sequence.
14523045
GenBank_CPSequence
1
ctttgggagatggcggctcactttgtaagaaaattcatgtaggtacaatacgcataccattgcttatttttggttgcatattgtcgtgctgttttcaatgttaaattacttttgcgaagagcagcgatatcttgcatcgtgtgagccgtgcgaggatcgagagtgtcagcaggttggaatgggtcaagccccttagtgcgtctggtagctggcattttgcaaggtgggggcagtcaaaaaaagttgaacgatggatatgagcaatgttgttcttagaacggaagtaccatggatgaggttgctgcaacgaatgacattttatgtgtggagctgacgccgagactaatgaggcggcatttccattacgaaagatactaacccgggacaggttgagcaaagcttcagtaaactgtagtttactggaactgatgtaacaggcaacaggtcgtgtaaattctagtttactggaacgctaccttgggacatttgaaaaaatcggcgacccccactatggggacatgtccccgcggctcgccttgtcccgggtccctggttccagagaacacctgcttgctgacttgctgctcttcttacagcgattactatgtagtcacctgtcatgacgtcaaaagtcgtactttctaatcgcgcgcgccatctggcatcttgtctcatgacctgttccagatataaaagcatcttttcccaggcattacattcttccgttgagttatctgtaagccaacccaacaaataatac
GenBank_CP047908_Region_1244167_1244926_SBOLDesignerActivity
1
Sophia Garcia de Resende
2021-11-01T18:51:50.155Z
Association
1
SBOLDesigner
3.1
SBOLDesigner CAD Tool
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Samuel Bridge
Chris Myers
Michal Galdzicki
Michael Zhang
John Gennari
Sean Sleight
Bryan Bartley
Evren Sirin