BBa_I1040
1
BBa_I1040
RNA Regulation Target ( Promoter driven by C0010 and cI(2) CDS)
2003-01-31T12:00:00Z
2015-08-31T04:07:29Z
see references
Coding region for the LacO-1 promoter with antisense binding region for <bb_part>BBa_I1041</bb_part> and <bb_part>BBa_I1042</bb_part>, and a codon modified cI(1) protein with an LVA degradation tailCoding region for the LacI protein with an LVA degradation tail and without an RBS. LacI binds to the pLac regulator (<bb_part>BBa_R0010</bb_part>) and hybrid Pl-lac01 regulator as is used in parts <bb_part>BBa_I1020</bb_part>, <bb_part>BBa_I1023</bb_part>, <bb_part>BBa_I1031</bb_part>, <bb_part>BBa_I1032</bb_part>, <bb_part>BBa_I1040</bb_part>, <bb_part>BBa_I1041</bb_part>, <bb_part>BBa_I1042</bb_part>, <bb_part>BBa_I1060</bb_part>, <bb_part>BBa_I1063</bb_part>, <bb_part>BBa_I1020</bb_part>. IPTG (Isopropylthiogalactoside) binds to LacI and inhibits its operation, thus allowing transcription. This is the basis of an "Implies" gate.</P>
false
false
_1_
0
24
7
It's complicated
false
<P> <P> <bb_part>BBa_I1040</bb_part> Custom cI Protein with LacO-1 Promoter is based on BioBricks <bb_part>BBa_C0050</bb_part>. It is designed such that <bb_part>BBa_I1041</bb_part> and <bb_part>BBa_I1042</bb_part> can be used to interfere with the <bb_part>BBa_1040</bb_part> transcript by anti-sense mRNA binding, in the KISS or micRNA method shown below. <bb_part>BBa_I1040</bb_part> and <bb_part>BBa_I1041</bb_part> or <bb_part>BBa_I1042</bb_part> can act indepently of related biobrick parts <bb_part>BBa_I1031</bb_part>, <bb_part>BBa_I1032</bb_part>, <bb_part>BBa_I1020</bb_part>, and <bb_part>BBa_1013</bb_part>. [<A href="http://biobricks.ai.mit.edu/BB_References.htm#KEIL96">KEIL96</A>]<P> Incompatible with systems containing IPTG, lactose, lacI, or cI. <p> May be some cross talk with systems containing <bb_part>BBa_I1020</bb_part> or <bb_part>BBa_I1060</bb_part>. Compatible with all other BBa_line I-line parts. <p> Proper operation requires AMP/CAP complex, which should normally be present in the cell.
false
Grace Kenney, Daniel Shen, Neelaksh Varshney, Samantha Sutton
annotation7055
1
BBa_I1040
range7055
1
1
841
annotation1912
1
SsrA
range1912
1
803
841
annotation1910
1
-35
range1910
1
21
26
annotation1919
1
intentional junk dna
range1919
1
86
89
annotation1908
1
start
range1908
1
92
94
annotation1920
1
antisense RNA pairing
range1920
1
56
163
annotation1917
1
intentional junk dna
range1917
1
56
75
annotation1914
1
LacO-1 region
range1914
1
1
20
annotation1911
1
-10
range1911
1
44
49
annotation1915
1
LacO-1
range1915
1
27
43
annotation1909
1
cI lambda
range1909
1
92
841
annotation1913
1
2
range1913
1
836
841
annotation1918
1
RBS
range1918
1
78
83
annotation1916
1
start
range1916
1
56
56
BBa_I1040_sequence
1
ataaatgtgagcggataacattgacattgtgagcggataacaagatactgagcacctggagcacactactgtcgcacaggaaaccctagcgatgagtactaagaaaaagcctttgactcaggaacaactcgaagatgcccgccgtctcaaggccatctacgagaaaaagaaaaatgaacttggcttatcccaggaatctgtcgcagacaagatggggatggggcagtcaggcgttggtgctttatttaatggcatcaatgcattaaatgcttataacgccgcattgcttgcaaaaattctcaaagttagcgttgaagaatttagcccttcaatcgccagagaaatctacgagatgtatgaagcggttagtatgcagccgtcacttagaagtgagtatgagtaccctgttttttctcatgttcaggcagggatgttctcacctgagcttagaacctttaccaaaggtgatgcggagagatgggtaagcacaaccaaaaaagccagtgattctgcattctggcttgaggttgaaggtaattccatgaccgcaccaacaggctccaagccaagctttcctgacggaatgttaattctcgttgaccctgagcaggctgttgagccaggtgatttctgcatagccagacttgggggtgatgagtttaccttcaagaaactgatcagggatagcggtcaggtgtttttacaaccactaaacccacagtacccaatgatcccatgcaatgagagttgttccgttgtggggaaagttatcgctagtcagtggcctgaagagacgtttggcgctgcaaacgacgaaaactacgctttagtagcttaataa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z