BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_I725025
1
BBa_I725025
RBS + Butanol dehydrogenase
2007-10-22T11:00:00Z
2015-08-31T04:07:54Z
RBS from B0034, Butanol dehydrogenase is E. coli codon optimized from C. acetobutylicum
This is used to construct an operon for the major metabolic enzymes in the Clostridium acetobutylicum butanoate pathway.
false
false
_106_
0
1839
9
It's complicated
false
Because B0034 is too small to cutout from a gel, this part was cloned into the plasmid containing B0034.
false
Wayne Materi
component1953410
1
BBa_I725015
component1953409
1
BBa_B0034
annotation1953410
1
BBa_I725015
range1953410
1
19
1206
annotation1953409
1
BBa_B0034
range1953409
1
1
12
BBa_I725015
1
BBa_I725015
Butanol dehydrogenase
2007-06-17T11:00:00Z
2015-08-31T04:07:54Z
C. acetobutylicum genome CAC_3298
Butanol dehydrogenase from C. acetobutylicum. This catalyzes the fifth step of butanol biosythesis. It has been cloned into e. coli previously and activity has been recovered.
false
false
_106_
0
1824
9
It's complicated
false
This part has been optimized for synthesis in E. Coli and has had its restriction sites removed. It has had its GTG start codon mutated to ATG and its stop codon mutated to TAATAA. It has also had ad C terminal His tag added.
false
Erin Dul
BBa_I725015_sequence
1
atggttgacttcgaatactccatcccgacccgtatcttcttcggtaaagacaaaatcaacgttctgggtcgtgaactgaaaaaatacggttccaaagttctgatcgtttacggtggtggttccatcaaacgtaacggtatctacgacaaagctgtttccatcctggaaaaaaactccatcaaattctacgaactggctggtgttgaaccgaacccgcgtgttaccaccgttgaaaaaggtgttaaaatctgccgtgaaaacggtgttgaagttgttctggctatcggtggtggttccgctatcgactgcgctaaagttatcgctgctgcttgcgaatacgacggtaacccgtgggacatcgttctggacggttccaaaatcaaacgtgttctgccgatcgcttccatcctgaccatcgctgctaccggttccgaaatggacacctgggctgttatcaacaacatggacaccaacgaaaaactgatcgctgctcacccggacatggctccgaaattctccatcctggacccgacctacacctacaccgttccgaccaaccagaccgctgctggtaccgctgacatcatgtcccacatcttcgaagtttacttctccaacaccaaaaccgcttacctgcaagaccgtatggctgaagctctgctgcgtacctgcatcaaatacggtggtatcgctctggaaaaaccggacgactacgaagctcgtgctaacctgatgtgggcttcctccctggctatcaacggtctgctgacctacggtaaagacaccaactggtccgttcacctgatggaacacgaactgtccgcttactacgacatcacccacggtgttggtctggctatcctgaccccgaactggatggaatacatcctgaacaacgacaccgtttacaaattcgttgaatacggtgttaacgtttggggtatcgacaaagaaaaaaaccactacgacatcgctcaccaggctatccagaaaacccgtgactacttcgttaacgttctgggtctgccgtcccgtctgcgtgacgttggtatcgaagaagaaaaactggacatcatggctaaagaatccgttaaactgaccggtggtaccatcggtaacctgcgtccggttaacgcttccgaagttctgcaaatcttcaaaaaatccgttcatcaccatcaccatcac
BBa_I725025_sequence
1
aaagaggagaaatactagatggttgacttcgaatactccatcccgacccgtatcttcttcggtaaagacaaaatcaacgttctgggtcgtgaactgaaaaaatacggttccaaagttctgatcgtttacggtggtggttccatcaaacgtaacggtatctacgacaaagctgtttccatcctggaaaaaaactccatcaaattctacgaactggctggtgttgaaccgaacccgcgtgttaccaccgttgaaaaaggtgttaaaatctgccgtgaaaacggtgttgaagttgttctggctatcggtggtggttccgctatcgactgcgctaaagttatcgctgctgcttgcgaatacgacggtaacccgtgggacatcgttctggacggttccaaaatcaaacgtgttctgccgatcgcttccatcctgaccatcgctgctaccggttccgaaatggacacctgggctgttatcaacaacatggacaccaacgaaaaactgatcgctgctcacccggacatggctccgaaattctccatcctggacccgacctacacctacaccgttccgaccaaccagaccgctgctggtaccgctgacatcatgtcccacatcttcgaagtttacttctccaacaccaaaaccgcttacctgcaagaccgtatggctgaagctctgctgcgtacctgcatcaaatacggtggtatcgctctggaaaaaccggacgactacgaagctcgtgctaacctgatgtgggcttcctccctggctatcaacggtctgctgacctacggtaaagacaccaactggtccgttcacctgatggaacacgaactgtccgcttactacgacatcacccacggtgttggtctggctatcctgaccccgaactggatggaatacatcctgaacaacgacaccgtttacaaattcgttgaatacggtgttaacgtttggggtatcgacaaagaaaaaaaccactacgacatcgctcaccaggctatccagaaaacccgtgactacttcgttaacgttctgggtctgccgtcccgtctgcgtgacgttggtatcgaagaagaaaaactggacatcatggctaaagaatccgttaaactgaccggtggtaccatcggtaacctgcgtccggttaacgcttccgaagttctgcaaatcttcaaaaaatccgttcatcaccatcaccatcac
BBa_B0034_sequence
1
aaagaggagaaa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z