BBa_B0012
1
BBa_B0012
TE from coliphageT7
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>.
Released HQ 2013
Transcription terminator for the <i>E.coli</i> RNA polymerase.
false
false
_1_
0
24
7
In stock
false
<P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator.
false
Reshma Shetty
annotation1687
1
stop
range1687
1
34
34
annotation1690
1
polya
range1690
1
28
41
annotation1686
1
T7 TE
range1686
1
8
27
annotation7020
1
BBa_B0012
range7020
1
1
41
BBa_I719005
1
pT7
T7 Promoter
2007-10-23T11:00:00Z
2015-08-31T04:07:53Z
---
Released HQ 2013
Just a T7 Promoter
false
false
_128_
0
2097
9
In stock
true
None
true
Imperial 2007
BBa_I746906
1
BBa_I746906
P7 GFP driven by T7 promoter
2008-09-29T11:00:00Z
2015-08-31T04:08:05Z
This part was created by standard assembly from construction intermediates: I746911 was put together with I746917:B0015
This is one of the constructs used to characterise a new version of GFP contributed to the registry: P7 GFP (see I746917 part description for source and other information)
false
false
_116_
0
2122
9
It's complicated
false
no special considerations
true
Stefan Milde
component1977573
1
BBa_B0012
component1977570
1
BBa_I746917
component1977566
1
BBa_B0034
component1977571
1
BBa_B0010
component1977564
1
BBa_I719005
annotation1977566
1
BBa_B0034
range1977566
1
32
43
annotation1977573
1
BBa_B0012
range1977573
1
866
906
annotation1977570
1
BBa_I746917
range1977570
1
50
769
annotation1977571
1
BBa_B0010
range1977571
1
778
857
annotation1977564
1
BBa_I719005
range1977564
1
1
23
BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_B0010
1
BBa_B0010
T1 from E. coli rrnB
2003-11-19T12:00:00Z
2015-08-31T04:07:20Z
Transcriptional terminator consisting of a 64 bp stem-loop.
false
false
_1_
0
24
7
In stock
false
true
Randy Rettberg
annotation4184
1
stem_loop
range4184
1
12
55
annotation7018
1
BBa_B0010
range7018
1
1
80
BBa_I746917
1
BBa_I746917
P7 GFP
2008-09-29T11:00:00Z
2015-08-31T04:08:05Z
P7 GFP was created and described by: Fisher et al(2008): "Laboratory evolution of fast-folding green fluorescent protein using secretory pathway quality control", PLoS ONE 3(6)
It was biobricked by PCR and standard assembly from DNA kindly provided by Dr Adam C Fisher, Cornell University, New York.
Coding region of P7 GFP (Fisher et al(2008): "Laboratory evolution of fast-folding green fluorescent protein using secretory pathway quality control", PLoS ONE 3(6))
P7 GFP carries the following amino acid changes as compared to mut3, the "standard" GFP used in the majority of registry constructs:
F64L, G65A, V68L, N105Y, E124V, Y145F
Its in vivo properties are the same as those of mut3 GFP (for improved in vivo properties see superfolder GFP: I746916). However, it is more stable in vitro and resists denaturation better than mut3. Additionally it refolds (after denaturation) at a much faster rate than does mut3 GFP - hence it might be useful for in vitro applications.
It has been used in the following constructs:
Driven by pBAD and T7 promoters: I746904 and I746906 respectively.
A 6-his tagged version for purification exists and is driven by pBAD or T7 as well: I746905 and I746907 are the respective part numbers.
false
false
_116_
0
2122
9
Not in stock
false
PCR was carried out from plasmid DNA followed by standard assembly into several constructs.
false
Stefan Milde
annotation1977537
1
stop
range1977537
1
715
720
annotation1977536
1
start
range1977536
1
1
3
annotation1977538
1
P7 GFP coding sequence
range1977538
1
1
720
BBa_B0010_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc
BBa_I719005_sequence
1
taatacgactcactatagggaga
BBa_I746906_sequence
1
taatacgactcactatagggagatactagagaaagaggagaaatactagatgcgtaaaggagaagaacttttcactggagttgtcccaattcttgttgaattagatggtgacgttaatgggcacaaattttctgtcagtggagagggtgaaggtgatgcaacatacggaaaacttacccttaaatttatttgcactactggaaaactacctgttccatggccaacacttgtcactactctcgcgtatggtcttcaatgctttgcgagatacccagatcatatgaaacagcatgactttttcaagagtgccatgcccgaaggttatgtacaggaaagaactatatttttcaaagatgacgggtactacaagacacgtgctgaagtcaagtttgaaggtgatacccttgttaatagaatcgtgttaaaaggtattgattttaaagaagatggaaacattcttggacacaaattggaatacaactttaactcacacaatgtatacatcatggcagacaaacaaaagaatggaatcaaagttaacttcaaaattagacacaacattgaagatggaagcgttcaactagcagaccattatcaacaaaatactccaattggcgatggccctgtccttttaccagacaaccattacctgtccacacaatctgccctttcgaaagatcccaacgaaaagagagaccacatggtccttcttgagtttgtaacagctgctggaattacacatggcatggatgaactatacaaatgatgatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_B0034_sequence
1
aaagaggagaaa
BBa_B0012_sequence
1
tcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_I746917_sequence
1
atgcgtaaaggagaagaacttttcactggagttgtcccaattcttgttgaattagatggtgacgttaatgggcacaaattttctgtcagtggagagggtgaaggtgatgcaacatacggaaaacttacccttaaatttatttgcactactggaaaactacctgttccatggccaacacttgtcactactctcgcgtatggtcttcaatgctttgcgagatacccagatcatatgaaacagcatgactttttcaagagtgccatgcccgaaggttatgtacaggaaagaactatatttttcaaagatgacgggtactacaagacacgtgctgaagtcaagtttgaaggtgatacccttgttaatagaatcgtgttaaaaggtattgattttaaagaagatggaaacattcttggacacaaattggaatacaactttaactcacacaatgtatacatcatggcagacaaacaaaagaatggaatcaaagttaacttcaaaattagacacaacattgaagatggaagcgttcaactagcagaccattatcaacaaaatactccaattggcgatggccctgtccttttaccagacaaccattacctgtccacacaatctgccctttcgaaagatcccaacgaaaagagagaccacatggtccttcttgagtttgtaacagctgctggaattacacatggcatggatgaactatacaaatgatga
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z