BBa_R0078
1
cinR
Promoter (cinR and HSL regulated)
2004-01-29T12:00:00Z
2015-05-08T01:14:15Z
Rhizobium leguminosarum
Released HQ 2013
false
false
_1_
0
24
7
In stock
false
true
Drew Endy
annotation318234
1
unidentified/uncharacterized CinR dependent
range318234
1
1
220
annotation318250
1
stem_loop
range318250
1
91
136
annotation318244
1
stem_loop
range318244
1
35
74
BBa_I761001
1
OmpR_BS
OmpR binding site
2007-09-15T11:00:00Z
2015-08-31T04:08:08Z
BBa_R0082
OmpR binding site. When position behind a promotor, it will turns that promotor into a OmpR controlled promotor. OmpR will function as an inhibitor of that promotor.
false
false
_140_
0
2031
9
Not in stock
false
This part was derived from BBa_R0082 by PCR.
false
2007 NYMU_Taiwan iGEM Team
annotation1944249
1
C2 OmpR
range1944249
1
22
40
annotation1944250
1
C3 OmpR
range1944250
1
43
60
annotation1944248
1
C1 OmpR
range1944248
1
2
19
BBa_I761011
1
BBa_I761011
CinR, CinL and glucose controlled promotor
2007-10-18T11:00:00Z
2015-08-31T04:08:08Z
*BBa_R0078
*BBa_I761001
This promotor is controlled by cinr, cinl and extrcellular glucose concentration. High extracellular glucose concentration will inhibit this promotor through the action of phosphorylated OmpR. Phosphorylated OmpR will bind the OmpR binding site of the promotor and block the movement of RNA polymerase. In contrast, the combined action of CinR and CinL will turn on the promotor. But only when the extracellular glucose level is low so OmpR dephosphorylate and dissociate from its binding site will this promotor become active. In essence, this promotor function as an AND gate, it will turn on if and only if the extracellular glucose level is low and there are some functional CinR and CinL protein inside the cell.
false
false
_140_
0
2031
9
It's complicated
false
The key to the function of the promotor is the inhibitory ability of OmpR binding site. To ensure maximum affinity with phosphorylated OmpR, we use all three OmpR binding site.s.
false
2007 NYMU_Taiwan iGEM Team
component1950118
1
BBa_R0078
component1950122
1
BBa_I761001
annotation1950118
1
BBa_R0078
range1950118
1
1
225
annotation1950122
1
BBa_I761001
range1950122
1
234
295
BBa_R0078_sequence
1
ccctttgtgcgtccaaacggacgcacggcgctctaaagcgggtcgcgatctttcagattcgctcctcgcgctttcagtctttgttttggcgcatgtcgttatcgcaaaaccgctgcacacttttgcgcgacatgctctgatccccctcatctgggggggcctatctgagggaatttccgatccggctcgcctgaaccattctgctttccacgaacttgaaaacgc
BBa_I761001_sequence
1
tacattttgaaacatctatagcgataaatgaaacatcttaaaagttttagtatcatattcgt
BBa_I761011_sequence
1
ccctttgtgcgtccaaacggacgcacggcgctctaaagcgggtcgcgatctttcagattcgctcctcgcgctttcagtctttgttttggcgcatgtcgttatcgcaaaaccgctgcacacttttgcgcgacatgctctgatccccctcatctgggggggcctatctgagggaatttccgatccggctcgcctgaaccattctgctttccacgaacttgaaaacgctactagagtacattttgaaacatctatagcgataaatgaaacatcttaaaagttttagtatcatattcgt
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z