BBa_J07076 1 Toxr-PhoA promotor, rbs, toxr'-phoa, terminator 2005-08-26T11:00:00Z 2015-08-31T04:08:20Z promotor, rbs, toxr'-phoa, terminator false false _21_ 0 363 21 Not in stock false false Will Bosworth component1672919 1 BBa_J07005 component1672897 1 BBa_B0034 component1672914 1 BBa_J07009 component1672889 1 BBa_R0040 component1672924 1 BBa_B0010 component1672934 1 BBa_B0012 annotation1672924 1 BBa_B0010 range1672924 1 2141 2220 annotation1672889 1 BBa_R0040 range1672889 1 1 54 annotation1672914 1 BBa_J07009 range1672914 1 81 710 annotation1672919 1 BBa_J07005 range1672919 1 717 2132 annotation1672934 1 BBa_B0012 range1672934 1 2229 2269 annotation1672897 1 BBa_B0034 range1672897 1 63 74 BBa_J07005 1 BBa_J07005 PhoA (E.coli JM83 alkaline phosphatase gene) 2005-07-04T11:00:00Z 2015-08-31T04:08:19Z http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&qty=1&c_start=1&list_uids=42385&dopt=fasta&sendto=on&from=begin&to=end&extrafeatpresent=1&ef_MGC=16 phoA can substituted for the periplasmic region of ToxR transmembrane dimerizing protein. igemmit2005 will be using this as a positive control in tests related to ToxR pathway. false false _21_ 0 363 21 It's complicated false false igem_mit_2005 annotation1571543 1 PhoA range1571543 1 1 1416 BBa_B0012 1 BBa_B0012 TE from coliphageT7 2003-01-31T12:00:00Z 2015-08-31T04:07:20Z Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>. Released HQ 2013 Transcription terminator for the <i>E.coli</i> RNA polymerase. false false _1_ 0 24 7 In stock false <P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator. false Reshma Shetty annotation1690 1 polya range1690 1 28 41 annotation1686 1 T7 TE range1686 1 8 27 annotation1687 1 stop range1687 1 34 34 annotation7020 1 BBa_B0012 range7020 1 1 41 BBa_B0010 1 BBa_B0010 T1 from E. coli rrnB 2003-11-19T12:00:00Z 2015-08-31T04:07:20Z Transcriptional terminator consisting of a 64 bp stem-loop. false false _1_ 0 24 7 In stock false true Randy Rettberg annotation4184 1 stem_loop range4184 1 12 55 annotation7018 1 BBa_B0010 range7018 1 1 80 BBa_B0034 1 BBa_B0034 RBS (Elowitz 1999) -- defines RBS efficiency 2003-01-31T12:00:00Z 2015-08-31T04:07:20Z Released HQ 2013 RBS based on Elowitz repressilator. false true _1_ 0 24 7 In stock false Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS. Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a> true Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003. annotation23325 1 conserved range23325 1 5 8 BBa_J07009 1 BBa_J07009 toxicity-gene activator from Vibrio cholerae 2005-07-06T11:00:00Z 2015-08-31T04:08:19Z shortened BBa_J07008. Typical ToxR-periplasm-region subsitutions are done @ aa 211. explanation of ToxR domains @ http://model.mit.edu/igem/images/d/d7/Kolmar95.pdf ELIMINATE XbaI SITE PLZZZZZ false false _21_ 0 363 21 In stock true true mit_igem_2005 annotation1668506 1 Cytoplasmic Region range1668506 1 1 546 annotation1668507 1 Coding Sequence for ToxR' range1668507 1 1 630 annotation1668510 1 Periplasmic Region range1668510 1 595 630 annotation1668508 1 Start Codon range1668508 1 6 8 annotation1668509 1 Transmembrane Region range1668509 1 547 594 BBa_R0040 1 p(tetR) TetR repressible promoter 2003-01-31T12:00:00Z 2015-05-08T01:14:14Z Lutz, R., Bujard, H., <em>Nucleic Acids Research</em> (1997) 25, 1203-1210. Released HQ 2013 Sequence for pTet inverting regulator driven by the TetR protein.</P> false true _1_ 0 24 7 In stock false <P> <P>BBa_R0040 TetR-Regulated Promoter is based on a cI promoter. It has been modified to include two TetR binding sites and the BioBrick standard assembly head and tail restriction sites.<P> true June Rhee, Connie Tao, Ty Thomson, Louis Waldman annotation1986787 1 -10 range1986787 1 43 48 annotation1986783 1 TetR 1 range1986783 1 1 19 annotation1986784 1 BBa_R0040 range1986784 1 1 54 annotation1986786 1 TetR 2 range1986786 1 26 44 annotation1986785 1 -35 range1986785 1 20 25 BBa_J07009_sequence 1 atgttcggattaggacacaactcaaaagagatatcgatgagtcatattggtactaaattcattcttgctgaaaaatttaccttcgatcccctaagcaatactctgattgacaaagaagatagtgaagagatcattcgattaggcagcaacgaaagccgaatcctttggctgctggcccaacgtccaaacgaggtaatttctcgcaatgatttgcatgactttgtttggcgagagcaaggttttgaagtcgatgattccagcttaacccaagccatttcgactctgcgcaaaatgctcaaagattcgacaaagtccccacaatacgtcaaaacggttccgaagcgcggttaccaattgatcgcccgagtggaaacggttgaagaagagatggctcgcgaaaacgaagctgctcatgacatctctcagccagaatctgtcaatgaatacgcagaatcaagcagtgtgccttcatcagccactgtagtgaacacaccgcagccagccaatgtcgtggcgaataaatcggctccaaacttggggaatcgactgtttattctgatagcggtcttacttcccctcgcagtattactgctcactaacccaagccaatccagctttaaacccctaacg BBa_B0010_sequence 1 ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc BBa_J07005_sequence 1 atgaaacagagcaccattgcgctggcgctgctgccgctgctgtttaccccggtgaccaaagcgcgcaccccggaaatgccggtgctggaaaaccgcgcggcgcagggcgatattaccgcgccgggcggcgcgcgccgcctgaccggcgatcagaccgcggcgctgcgcgatagcctgagcgataaaccggcgaaaaacattattctgctgattggcgatggcatgggcgatagcgaaattaccgcggcgcgcaactatgcggaaggcgcgggcggcttttttaaaggcattgatgcgctgccgctgaccggccagtatacccattatgcgctgaacaaaaaaaccggcaaaccggattatgtgaccgatagcgcggcgagcgcgaccgcgtggagcaccggcgtgaaaacctataacggcgcgctgggcgtggatattcatgaaaaagatcatccgaccattctggaaatggcgaaagcggcgggcctggcgaccggcaacgtgagcaccgcggaactgcaagatgcgaccccggcggcgctggtggcgcatgtgaccagccgcaaatgctatggcccgagcgcgaccagcgaaaaatgcccgggcaacgcgctggaaaaaggcggcaaaggcagcattaccgaacagctgctgaacgcgcgcgcggatgtgaccctgggcggcggcgcgaaaacctttgcggaaaccgcgaccgcgggcgaatggcagggcaaaaccctgcgcgaacaggcgcaggcgcgcggctatcagctggtgagcgatgcggcgagcctgaacagcgtgaccgaagcgaaccagcagaaaccgctgctgggcctgtttgcggatggcaacatgccggtgcgctggctgggcccgaaagcgacctatcatggcaacattgataaaccggcggtgacctgcaccccgaacccgcagcgcaacgatagcgtgccgaccctggcgcagatgaccgataaagcgattgaactgctgagcaaaaacgaaaaaggcttttttctgcaagtggaaggcgcgagcattgataaacaggatcatgcggcgaacccgtgcggccagattggcgaaaccgtggatctggatgaagcggtgcagcgcgcgctggaatttgcgaaaaaagaaggcaacaccctggtgattgtgaccgcggatcatgcgcatgcgagccagattgtggcgccggataccaaagcgccgggcctgacccaggcgctgaacaccaaagatggcgcggtgatggtgatgagctatggcaacagcgaagaagatagccaggaacataccggcagccagctgcgcattgcggcgtatggcccgcatgcggcgaacgtggtgggcctgaccgatcagaccgatctgttttataccatgaaagcggcgctgggcctgaaataa BBa_B0034_sequence 1 aaagaggagaaa BBa_R0040_sequence 1 tccctatcagtgatagagattgacatccctatcagtgatagagatactgagcac BBa_J07076_sequence 1 tccctatcagtgatagagattgacatccctatcagtgatagagatactgagcactactagagaaagaggagaaatactagatgttcggattaggacacaactcaaaagagatatcgatgagtcatattggtactaaattcattcttgctgaaaaatttaccttcgatcccctaagcaatactctgattgacaaagaagatagtgaagagatcattcgattaggcagcaacgaaagccgaatcctttggctgctggcccaacgtccaaacgaggtaatttctcgcaatgatttgcatgactttgtttggcgagagcaaggttttgaagtcgatgattccagcttaacccaagccatttcgactctgcgcaaaatgctcaaagattcgacaaagtccccacaatacgtcaaaacggttccgaagcgcggttaccaattgatcgcccgagtggaaacggttgaagaagagatggctcgcgaaaacgaagctgctcatgacatctctcagccagaatctgtcaatgaatacgcagaatcaagcagtgtgccttcatcagccactgtagtgaacacaccgcagccagccaatgtcgtggcgaataaatcggctccaaacttggggaatcgactgtttattctgatagcggtcttacttcccctcgcagtattactgctcactaacccaagccaatccagctttaaacccctaacgtactagatgaaacagagcaccattgcgctggcgctgctgccgctgctgtttaccccggtgaccaaagcgcgcaccccggaaatgccggtgctggaaaaccgcgcggcgcagggcgatattaccgcgccgggcggcgcgcgccgcctgaccggcgatcagaccgcggcgctgcgcgatagcctgagcgataaaccggcgaaaaacattattctgctgattggcgatggcatgggcgatagcgaaattaccgcggcgcgcaactatgcggaaggcgcgggcggcttttttaaaggcattgatgcgctgccgctgaccggccagtatacccattatgcgctgaacaaaaaaaccggcaaaccggattatgtgaccgatagcgcggcgagcgcgaccgcgtggagcaccggcgtgaaaacctataacggcgcgctgggcgtggatattcatgaaaaagatcatccgaccattctggaaatggcgaaagcggcgggcctggcgaccggcaacgtgagcaccgcggaactgcaagatgcgaccccggcggcgctggtggcgcatgtgaccagccgcaaatgctatggcccgagcgcgaccagcgaaaaatgcccgggcaacgcgctggaaaaaggcggcaaaggcagcattaccgaacagctgctgaacgcgcgcgcggatgtgaccctgggcggcggcgcgaaaacctttgcggaaaccgcgaccgcgggcgaatggcagggcaaaaccctgcgcgaacaggcgcaggcgcgcggctatcagctggtgagcgatgcggcgagcctgaacagcgtgaccgaagcgaaccagcagaaaccgctgctgggcctgtttgcggatggcaacatgccggtgcgctggctgggcccgaaagcgacctatcatggcaacattgataaaccggcggtgacctgcaccccgaacccgcagcgcaacgatagcgtgccgaccctggcgcagatgaccgataaagcgattgaactgctgagcaaaaacgaaaaaggcttttttctgcaagtggaaggcgcgagcattgataaacaggatcatgcggcgaacccgtgcggccagattggcgaaaccgtggatctggatgaagcggtgcagcgcgcgctggaatttgcgaaaaaagaaggcaacaccctggtgattgtgaccgcggatcatgcgcatgcgagccagattgtggcgccggataccaaagcgccgggcctgacccaggcgctgaacaccaaagatggcgcggtgatggtgatgagctatggcaacagcgaagaagatagccaggaacataccggcagccagctgcgcattgcggcgtatggcccgcatgcggcgaacgtggtgggcctgaccgatcagaccgatctgttttataccatgaaagcggcgctgggcctgaaataatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata BBa_B0012_sequence 1 tcacactggctcaccttcgggtgggcctttctgcgtttata igem2sbol 1 iGEM to SBOL conversion Conversion of the iGEM parts registry to SBOL2.1 James Alastair McLaughlin Chris J. Myers 2017-03-06T15:00:00.000Z