BBa_J100028
1
BBa_J100028
placeholder insert for BsaI Golden Gate Assembly of promoter
2011-08-29T11:00:00Z
2015-08-31T04:08:22Z
Synthesized de novo using DNA sequences from parts in the registry. Typical scars are absent from this DNA.
This insert can be placed in any vector that does not contain a BsaI site. BsaI is a type IIs restriction enzyme use in Golden Gate Assembly of multiple inserts. Most versions of ampicillin resistance in plasmids contain a BsaI site. We are putting this insert into a modified pSB1A2 that has its vector BsaI site mutated (see part number ##). This insert can be digested with BsaI and mixed with ligase to make room for a promoter of your choice that has appropriate sticky ends. We are using this insert in combination with new promoters assembled from oligonucleotides (oligos). When assembled, the new promoter would have a four base overhang of 5' GCTG 3' on the left side of the top strand and a four base overhang of 3' CGCC 5' on the right side of the bottom strand:
5' CGACNNN...NNN 3'
3' NNN...NNNCGCC 5'
This insert contains BBa biobrick prefix, BbsI site, 4 base overhang followed by BsaI site cutting to the left, transcriptional terminator B0014, BsaI site that cuts to the right, 4 base overhang, BbsI site, RBS B0034, mRFP part number ##) and ending in BBa biobrick suffix.
false
false
_578_
0
201
61
Not in stock
false
Had to avoid BsaI sites and BbsI sites as well as all biobrick restriction sites.
false
Malcolm Campbell
annotation2125666
1
BsaI cuts left
range2125666
1
34
39
annotation2125664
1
start
range2125664
1
176
178
annotation2125662
1
B0034
range2125662
1
158
169
annotation2125667
1
misc
range2125667
1
29
32
annotation2125660
1
prefix
range2125660
1
1
21
annotation2125663
1
BbsI cuts left
range2125663
1
23
28
annotation2125661
1
suffix
range2125661
1
858
877
annotation2125671
1
mRFP E1010
range2125671
1
176
856
annotation2125665
1
double stop
range2125665
1
851
856
annotation2125668
1
BsaI cuts right
range2125668
1
135
140
annotation2125669
1
misc
range2125669
1
142
145
annotation2125670
1
BbsI cuts right
range2125670
1
146
151
BBa_J100028_sequence
1
gaattcgcggccgcttctagaggtcttccgactgagacctcacactggctcaccttcgggtgggcctttctgcgtttatatactagagagagaatataaaaagccagattattaatccggcttttttattatttggtctcagcgggaagacaactagaaagaggagaaatactagatggcttcctccgaagatgttatcaaagagttcatgcgtttcaaagttcgtatggaaggttccgttaacggtcacgagttcgaaatcgaaggtgaaggtgaaggtcgtccgtacgaaggtacccagaccgctaaactgaaagttaccaaaggtggtccgctgccgttcgcttgggacatcctgtccccgcagttccagtacggttccaaagcttacgttaaacacccggctgacatcccggactacctgaaactgtccttcccggaaggtttcaaatgggaacgtgttatgaacttcgaagatggtggtgttgttaccgttacccaggactcctccctgcaagacggtgagttcatctacaaagttaaactgcgtggtaccaacttcccgtccgacggtccggttatgcagaaaaaaaccatgggttgggaagcttccaccgaacgtatgtacccggaagatggtgctctgaaaggtgaaatcaaaatgcgtctgaaactgaaagacggtggtcactacgacgctgaagttaaaaccacctacatggctaaaaaaccggttcagctgccgggtgcttacaaaaccgacatcaaactggacatcacctcccacaacgaagattacaccatcgttgaacagtacgaacgtgctgaaggtcgtcactccaccggtgcttaataatactagtagcggccgctgcag
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z