BBa_J100071
1
BBa_J100071
cadA promoter
2012-07-04T11:00:00Z
2015-08-31T04:08:22Z
Taken from ''E. coli'' genome through PCR.
The promoter for the cadBA operon in ''E. coli''. It is induced by low pH ([http://ecocyc.org/ECOLI/NEW-IMAGE?type=GENE-IN-MAP&object=EG10131 cadA gene]). CadC senses external pH, by low pH preventing the formation of a disulfide bond, activating CadC. When activated, CadC binds to two sites upstream of the cadBA promoter, Cad1 and Cad2. The binding of CadC to these sites activates transcription by releasing the H-NS molecules that are bound to, and repressing, the cadBA operon ([http://ecocyc.org/ECOLI/NEW-IMAGE?type=ENZYME&object=PD00436 CadC function in cadBA operon]).
false
true
_578_
0
13950
9
Not in stock
false
We cloned the promoter region 334 bp upstream of the transcription start site, in which Cad1 and Cad2 are included.
false
Ben Clarkson
annotation2177460
1
H-NS binding site
range2177460
1
153
167
annotation2177458
1
H-NS binding site
range2177458
1
68
82
annotation2177463
1
Cad1 binding site
range2177463
1
188
225
annotation2177461
1
H-NS binding site
range2177461
1
199
213
annotation2177462
1
H-NS binding site
range2177462
1
296
310
annotation2177459
1
H-NS binding site
range2177459
1
149
163
annotation2177457
1
H-NS binding site
range2177457
1
11
25
annotation2177466
1
-10
range2177466
1
320
326
annotation2177467
1
-35
range2177467
1
298
306
annotation2177464
1
Cad2 binding site
range2177464
1
249
279
BBa_J100071_sequence
1
ccttatgttgtaccttatctcgacaaatttcttgcttcagaataagtaactccgggttgatttatgctcggaaatatttgttgttgagtttttgtatgttcctgttggtataatatgttgcggcaatttatttgccgcataatttttattacataaatttaaccagagaatgtcacgcaatccattgtaaacattaaatgtttatcttttcatgatatcaacttgcgatcctgatgtgttaataaaaaacctcaagttctcacttacagaaacttttgtgttatttcacctaatctttaggattaatccttttttcgtgagtaatcttatcgcc
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z