BBa_J100223 1 BBa_J100223 Caffeine Aptamer with RS3, riboswitch in tCloneRed 2015-07-06T11:00:00Z 2015-08-31T04:08:24Z tCloneRed = BBa_J119361 Riboswitch 3 = J100207; Wachsmuth et al. 2013, available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3575828/ . This part comes from the combination of a caffeine aptamer with part of "Riboswitch 3" from Wachsmuth (the sequence minus its aptamer) to make a new riboswitch. This riboswitch was inserted into tCloneRed, and functions to express the reporter gene, RFP, when in the presence of its ligand, caffeine. false false _578_ 0 23950 9 Not in stock false We had to add the aptamer to a riboswitch so that we could get the selective termination via the stem-loop behavior. We therefore did't know how the total riboswitch would fold or if it would be a successful riboswitch. Aptamer alone = GGAUGUCCAGUCGCUUGCAAUGCCCUUUUAGACCCUGAUGAGGAUCAUCGGACUUUGUCCUGUGGAGUAAGUCGCGAAACGGUGAAAGCCGUAGGUCU false Julia Preziosi annotation2432971 1 BD 18 C dog RBS range2432971 1 182 266 annotation2432977 1 RFP range2432977 1 267 947 annotation2432974 1 Caffeine RIboswitch range2432974 1 41 177 annotation2432965 1 P5 promoter range2432965 1 1 36 BBa_J100223_sequence 1 ttgacaattaatcatccggctcgtaatttatgtggacgacggatgtccagtcgcttgcaatgcccttttagaccctgatgaggatcatcggactttgtcctgtggagtaagtcgcgaaacggtgaaagccgtaggtcttttacatactcggtaaacagacctacggcttttttttttgcgggggcccaagttcacttaaaaaggagatcaacaatgaaagcaattttcgtactgaaacatcttaatcatgcgacggagcgtttctaatggcttcctccgaagatgttatcaaagagttcatgcgtttcaaagttcgtatggaaggttccgttaacggtcacgagttcgaaatcgaaggtgaaggtgaaggtcgtccgtacgaaggtacccagaccgctaaactgaaagttaccaaaggtggtccgctgccgttcgcttgggacatcctgtccccgcagttccagtacggttccaaagcttacgttaaacacccggctgacatcccggactacctgaaactgtccttcccggaaggtttcaaatgggaacgtgttatgaacttcgaagatggtggtgttgttaccgttacccaggactcctccctgcaagacggtgagttcatctacaaagttaaactgcgtggtaccaacttcccgtccgacggtccggttatgcagaaaaaaaccatgggttgggaagcttccaccgaacgtatgtacccggaagatggtgctctgaaaggtgaaatcaaaatgcgtctgaaactgaaagacggtggtcactacgacgctgaagttaaaaccacctacatggctaaaaaaccggttcagctgccgggtgcttacaaaaccgacatcaaactggacatcacctcccacaacgaagattacaccatcgttgaacagtacgaacgtgctgaaggtcgtcactccaccggtgcttaataa igem2sbol 1 iGEM to SBOL conversion Conversion of the iGEM parts registry to SBOL2.1 Chris J. Myers James Alastair McLaughlin 2017-03-06T15:00:00.000Z