BBa_J120025 1 BBa_J120025 TACE(Tumor necrosis factor-&#945;-converting enzyme) aka ADAM17 endopepsidase (H. sapiens) 2012-04-02T11:00:00Z 2015-08-31T04:08:29Z it is a genomic sequence. ADAM17, also known as tumor necrosis factor &#8706; converting enzyme (TACE) is activated by several tyrosine kinase receptors, and is known to be over expressed in cancerous cells. It is an integral transmembrane metalloprotease that produces TNF-&#8706; and participates in ectodomain shedding of other transmembrane proteins. This part has to be linked with promoter in order to be expressed in yeast. false false _617_ 0 12909 9 Not in stock false atgcgccagagcctgctgtttctgaccagcgtggtgccgtttgtgctggcgccgcgcccg ccggatgatccgggctttggcccgcatcagcgcctggaaaaactggatagcctgctgagc gattatgatattctgagcctgagcaacattcagcagcatagcgtgcgcaaacgcgatctg cagaccagcacccatgtggaaaccctgctgacctttagcgcgctgaaacgccattttaaa ctgtatctgaccagcagcaccgaacgctttagccagaactttaaagtggtggtggtggat ggcaaaaacgaaagcgaatataccgtgaaatggcaggatttttttaccggccatgtggtg ggcgaaccggatagccgcgtgctggcgcatattcgcgatgatgatgtgattattcgcatt aacaccgatggcgcggaatataacattgaaccgctgtggcgctttgtgaacgataccaaa gataaacgcatgctggtgtataaaagcgaagatattaaaaacgtgagccgcctgcagagc ccgaaagtgtgcggctatctgaaagtggataacgaagaactgctgccgaaaggcctggtg gatcgcgaaccgccggaagaactggtgcatcgcgtgaaacgccgcgcggatccggatccg atgaaaaacacctgcaaactgctggtggtggcggatcatcgcttttatcgctatatgggc cgcggcgaagaaagcaccaccaccaactatctgattgaactgattgatcgcgtggatgat atttatcgcaacaccagctgggataacgcgggctttaaaggctatggcattcagattgaa cagattcgcattctgaaaagcccgcaggaagtgaaaccgggcgaaaaacattataacatg gcgaaaagctatccgaacgaagaaaaagatgcgtgggatgtgaaaatgctgctggaacag tttagctttgatattgcggaagaagcgagcaaagtgtgcctggcgcatctgtttacctat caggattttgatatgggcaccctgggcctggcgtatgtgggcagcccgcgcgcgaacagc catggcggcgtgtgcccgaaagcgtattatagcccggtgggcaaaaaaaacatttatctg aacagcggcctgaccagcaccaaaaactatggcaaaaccattctgaccaaagaagcggat ctggtgaccacccatgaactgggccataactttggcgcggaacatgatccggatggcctg gcggaatgcgcgccgaacgaagatcagggcggcaaatatgtgatgtatccgattgcggtg agcggcgatcatgaaaacaacaaaatgtttagcaactgcagcaaacagagcatttataaa accattgaaagcaaagcgcaggaatgctttcaggaacgcagcaacaaagtgtgcggcaac agccgcgtggatgaaggcgaagaatgcgatccgggcattatgtatctgaacaacgatacc tgctgcaacagcgattgcaccctgaaagaaggcgtgcagtgcagcgatcgcaacagcccg tgctgcaaaaactgccagtttgaaaccgcgcagaaaaaatgccaggaagcgattaacgcg acctgcaaaggcgtgagctattgcaccggcaacagcagcgaatgcccgccgccgggcaac gcggaagatgataccgtgtgcctggatctgggcaaatgcaaagatggcaaatgcattccg ttttgcgaacgcgaacagcagctggaaagctgcgcgtgcaacgaaaccgataacagctgc aaagtgtgctgccgcgatctgagcggccgctgcgtgccgtatgtggatgcggaacagaaa aacctgtttctgcgcaaaggcaaaccgtgcaccgtgggcttttgcgatatgaacggcaaa tgcgaaaaacgcgtgcaggatgtgattgaacgcttttgggattttattgatcagctgagc attaacacctttggcaaatttctggcggataacattgtgggcagcgtgctggtgtttagc ctgattttttggattccgtttagcattctggtgcattgcgtggataaaaaactggataaa cagtatgaaagcctgagcctgtttcatccgagcaacgtggaaatgctgagcagcatggat agcgcgagcgtgcgcattattaaaccgtttccggcgccgcagaccccgggccgcctgcag ccggcgccggtgattccgagcgcgccggcggcgccgaaactggatcatcagcgcatggat accattcaggaagatccgagcaccgatagccatatggatgaagatggctttgaaaaagat ccgtttccgaacagcagcaccgcggcgaaaagctttgaagatctgaccgatcatccggtg acccgcagcgaaaaagcggcgagctttaaactgcagcgccagaaccgcgtggatagcaaa gaaaccgaatgc false Sanjana Gurrala, Xiaoyang Feng, Stephen Cain, Orijit Kar, Sahil Sharma BBa_B0011 1 BBa_B0011 LuxICDABEG (+/-) 2003-01-31T12:00:00Z 2015-08-31T04:07:20Z Derived from luxICDABEG operon terminator of Vibrio fischeri <genbank>AF170104</genbank>. Released HQ 2013 Bidirectional transcriptional terminator consisting of a 22 bp stem-loop.</p> false false _1_ 0 24 7 In stock false <P> <P>In the naturally-occuring sequence there is a mismatch in the stem of the stem loop. This can be corrected via an A-&gt;G mutation (at position 40 -- sequence coordinate/not MFOLD coordinate). The above sequence does not reflect this mutation (but the MFOLD image does). This terminator's location cannot be found using some inverted repeat detectors like PALINDROME because it is too short and contains a mismatch. This one was found with the help of Tom Knight. It lies between two coding regions that point towards eachother.<P> true Reshma Shetty annotation7019 1 BBa_B0011 range7019 1 1 46 annotation1683 1 stem_loop range1683 1 13 35 BBa_J63006 1 GAL1 yeast GAL1 promoter 2006-10-10T11:00:00Z 2015-08-31T01:56:26Z genomic GAL1 locus Released HQ 2013 GAL1 promoter from S. cerevisiae false true _97_ 0 545 97 In stock false unchanged from genomic sequence true Caroline Ajo-Franklin BBa_J120026 1 BBa_J120026 Composite part containing Yeast promoter along with ADAM17. 2012-04-03T11:00:00Z 2015-08-31T04:08:29Z Later The composite part consist of Yeast promoter BBa_J63006 along with the ADAM17. This will be tested in a Yeast cell for the expression of ADAM17. false false _617_ 0 12298 9 Not in stock false There are no designs considerations. false Xiaoyang Feng, Orijit Kar, Stephen Cain, Sanjana Gurrala, Sahil Sharma component2172142 1 BBa_J63006 component2172143 1 BBa_J120025 component2172144 1 BBa_B0011 annotation2172144 1 BBa_B0011 range2172144 1 3025 3070 annotation2172142 1 BBa_J63006 range2172142 1 1 549 annotation2172143 1 BBa_J120025 range2172143 1 550 3024 BBa_J63006_sequence 1 ccccattatcttagcctaaaaaaaccttctctttggaactttcagtaatacgcttaactgctcattgctatattgaagtacggattagaagccgccgagcgggtgacagccctccgaaggaagactctcctccgtgcgtcctcgtcttcaccggtcgcgttcctgaaacgcagatgtgcctcgcgccgcactgctccgaacaataaagattctacaatactagcttttatggttatgaagaggaaaaattggcagtaacctggccccacaaaccttcaaatgaacgaatcaaattaacaaccataggatgataatgcgattagttttttagccttatttctggggtaattaatcagcgaagcgatgatttttgatctattaacagatatataaatgcaaaaactgcataaccactttaactaatactttcaacattttcggtttgtattacttcttattcaaatgtaataaaagtatcaacaaaaaattgttaatatacctctatactttaacgtcaaggaggaaactagacccgccgccaccatggag BBa_J120025_sequence 1 atgaggcagtctctcctattcctgaccagcgtggttcctttcgtgctggcgccgcgacctccggatgacccgggcttcggcccccaccagagactcgagaagcttgattctttgctctcagactacgatattctctctttatctaatatccagcagcattcggtaagaaaaagagatctacagacttcaacacatgtagaaacactactaactttttcagctttgaaaaggcattttaaattatacctgacatcaagtactgaacgtttttcacaaaatttcaaggtcgtggtggtggatggtaaaaacgaaagcgagtacactgtaaaatggcaggacttcttcactggacacgtggttggtgagcctgactctagggttctagcccacataagagatgatgatgttataatcagaatcaacacagatggggccgaatataacatagagccactttggagatttgttaatgataccaaagacaaaagaatgttagtttataaatctgaagatatcaagaatgtttcacgtttgcagtctccaaaagtgtgtggttatttaaaagtggataatgaagagttgctcccaaaagggttagtagacagagaaccacctgaagagcttgttcatcgagtgaaaagaagagctgacccagatcccatgaagaacacgtgtaaattattggtggtagcagatcatcgcttctacagatacatgggcagaggggaagagagtacaactacaaattacttaatagagctaattgacagagttgatgacatctatcggaacacttcatgggataatgcaggttttaaaggctatggaatacagatagagcagattcgcattctcaagtctccacaagaggtaaaacctggtgaaaagcactacaacatggcaaaaagttacccaaatgaagaaaaggatgcttgggatgtgaagatgttgctagagcaatttagctttgatatagctgaggaagcatctaaagtttgcttggcacaccttttcacataccaagattttgatatgggaactcttggattagcttatgttggctctcccagagcaaacagccatggaggtgtttgtccaaaggcttattatagcccagttgggaagaaaaatatctatttgaatagtggtttgacgagcacaaagaattatggtaaaaccatccttacaaaggaagctgacctggttacaactcatgaattgggacataattttggagcagaacatgatccggatggtctagcagaatgtgccccgaatgaggaccagggagggaaatatgtcatgtatcccatagctgtgagtggcgatcacgagaacaataagatgttttcaaattgcagtaaacaatcaatctataagaccattgaaagtaaggcccaggagtgttttcaagaacgcagcaataaagtttgtgggaactcgagggtggatgaaggagaagagtgtgatcctggcatcatgtatctgaacaacgacacctgctgcaacagcgactgcacgttgaaggaaggtgtccagtgcagtgacaggaacagtccttgctgtaaaaactgtcagtttgagactgcccagaagaagtgccaggaggcgattaatgctacttgcaaaggcgtgtcctactgcacaggtaatagcagtgagtgcccgcctccaggaaatgctgaagatgacactgtttgcttggatcttggcaagtgtaaggatgggaaatgcatccctttctgcgagagggaacagcagctggagtcctgtgcatgtaatgaaactgacaactcctgcaaggtgtgttgcagggacctttctggccgctgtgtgccctatgtcgatgctgaacaaaagaacttatttttgaggaaaggaaagccctgtacagtaggattttgtgacatgaatggcaaatgtgagaaacgagtacaggatgtaattgaacgattttgggatttcattgaccagctgagcatcaatacttttggaaagtttttagcagacaacatcgttgggtctgtcctggttttctccttgatattttggattcctttcagcattcttgtccattgtgtggataagaaattggataaacagtatgaatctctgtctctgtttcaccccagtaacgtcgaaatgctgagcagcatggattctgcatcggttcgcattatcaaaccctttcctgcgccccagactccaggccgcctgcaacctgcccctgtgatcccttcggcgccagcagctccaaaactggaccaccagagaatggacaccatccaggaagaccccagcacagactcacatatggacgaggatgggtttgagaaggaccccttcccaaatagcagcacagctgccaagtcatttgaggatctcacggaccatccggtcaccagaagtgaaaaggctgcctcctttaaactgcaacgtcagaatcgtgttgacagcaaagaaacagagtgctaa BBa_J120026_sequence 1 ccccattatcttagcctaaaaaaaccttctctttggaactttcagtaatacgcttaactgctcattgctatattgaagtacggattagaagccgccgagcgggtgacagccctccgaaggaagactctcctccgtgcgtcctcgtcttcaccggtcgcgttcctgaaacgcagatgtgcctcgcgccgcactgctccgaacaataaagattctacaatactagcttttatggttatgaagaggaaaaattggcagtaacctggccccacaaaccttcaaatgaacgaatcaaattaacaaccataggatgataatgcgattagttttttagccttatttctggggtaattaatcagcgaagcgatgatttttgatctattaacagatatataaatgcaaaaactgcataaccactttaactaatactttcaacattttcggtttgtattacttcttattcaaatgtaataaaagtatcaacaaaaaattgttaatatacctctatactttaacgtcaaggaggaaactagacccgccgccaccatggagatgaggcagtctctcctattcctgaccagcgtggttcctttcgtgctggcgccgcgacctccggatgacccgggcttcggcccccaccagagactcgagaagcttgattctttgctctcagactacgatattctctctttatctaatatccagcagcattcggtaagaaaaagagatctacagacttcaacacatgtagaaacactactaactttttcagctttgaaaaggcattttaaattatacctgacatcaagtactgaacgtttttcacaaaatttcaaggtcgtggtggtggatggtaaaaacgaaagcgagtacactgtaaaatggcaggacttcttcactggacacgtggttggtgagcctgactctagggttctagcccacataagagatgatgatgttataatcagaatcaacacagatggggccgaatataacatagagccactttggagatttgttaatgataccaaagacaaaagaatgttagtttataaatctgaagatatcaagaatgtttcacgtttgcagtctccaaaagtgtgtggttatttaaaagtggataatgaagagttgctcccaaaagggttagtagacagagaaccacctgaagagcttgttcatcgagtgaaaagaagagctgacccagatcccatgaagaacacgtgtaaattattggtggtagcagatcatcgcttctacagatacatgggcagaggggaagagagtacaactacaaattacttaatagagctaattgacagagttgatgacatctatcggaacacttcatgggataatgcaggttttaaaggctatggaatacagatagagcagattcgcattctcaagtctccacaagaggtaaaacctggtgaaaagcactacaacatggcaaaaagttacccaaatgaagaaaaggatgcttgggatgtgaagatgttgctagagcaatttagctttgatatagctgaggaagcatctaaagtttgcttggcacaccttttcacataccaagattttgatatgggaactcttggattagcttatgttggctctcccagagcaaacagccatggaggtgtttgtccaaaggcttattatagcccagttgggaagaaaaatatctatttgaatagtggtttgacgagcacaaagaattatggtaaaaccatccttacaaaggaagctgacctggttacaactcatgaattgggacataattttggagcagaacatgatccggatggtctagcagaatgtgccccgaatgaggaccagggagggaaatatgtcatgtatcccatagctgtgagtggcgatcacgagaacaataagatgttttcaaattgcagtaaacaatcaatctataagaccattgaaagtaaggcccaggagtgttttcaagaacgcagcaataaagtttgtgggaactcgagggtggatgaaggagaagagtgtgatcctggcatcatgtatctgaacaacgacacctgctgcaacagcgactgcacgttgaaggaaggtgtccagtgcagtgacaggaacagtccttgctgtaaaaactgtcagtttgagactgcccagaagaagtgccaggaggcgattaatgctacttgcaaaggcgtgtcctactgcacaggtaatagcagtgagtgcccgcctccaggaaatgctgaagatgacactgtttgcttggatcttggcaagtgtaaggatgggaaatgcatccctttctgcgagagggaacagcagctggagtcctgtgcatgtaatgaaactgacaactcctgcaaggtgtgttgcagggacctttctggccgctgtgtgccctatgtcgatgctgaacaaaagaacttatttttgaggaaaggaaagccctgtacagtaggattttgtgacatgaatggcaaatgtgagaaacgagtacaggatgtaattgaacgattttgggatttcattgaccagctgagcatcaatacttttggaaagtttttagcagacaacatcgttgggtctgtcctggttttctccttgatattttggattcctttcagcattcttgtccattgtgtggataagaaattggataaacagtatgaatctctgtctctgtttcaccccagtaacgtcgaaatgctgagcagcatggattctgcatcggttcgcattatcaaaccctttcctgcgccccagactccaggccgcctgcaacctgcccctgtgatcccttcggcgccagcagctccaaaactggaccaccagagaatggacaccatccaggaagaccccagcacagactcacatatggacgaggatgggtttgagaaggaccccttcccaaatagcagcacagctgccaagtcatttgaggatctcacggaccatccggtcaccagaagtgaaaaggctgcctcctttaaactgcaacgtcagaatcgtgttgacagcaaagaaacagagtgctaaagagaatataaaaagccagattattaatccggcttttttattattt BBa_B0011_sequence 1 agagaatataaaaagccagattattaatccggcttttttattattt igem2sbol 1 iGEM to SBOL conversion Conversion of the iGEM parts registry to SBOL2.1 Chris J. Myers James Alastair McLaughlin 2017-03-06T15:00:00.000Z