BBa_J64804
1
BBa_J64804
The promoter region (inclusive of regulator binding sites) of the B. subtilis RocDEF operon
2007-03-19T12:00:00Z
2015-05-08T01:08:17Z
Information was obtained from: http://dbtbs.hgc.jp/COG/prom/rocDEF.html.
This is the reported promoter region from the Bacillus subtilis RocDEF operon as taken from the DBTBS website (http://dbtbs.hgc.jp/). Base 1 to base 21 contains the binding site for the binding factor, RocR. The sequence, TATGCAAAAGAATTTTGCACT, reportedly contains the consensus sequence for binding of this factor. Base 42 to base 62 contains another binding site for the RocR binding factor, with ATATCAGAATGTTTTTGCACC as the binding consensus for this sequence. Bases 113-135 outline the binding site of the binding factor AhrC (CTTGCATTTATATAAAGGGAAAG). Bases 96 to 135 outline the promoter region for this operon (CTTGATTTGGCACAGAACTTGCATTTATATAAAGGGAAAG).
false
false
_98_
0
1428
98
Not in stock
false
This sequence only outlines the reported promoter region as ascertained from the online resource described above, and may lack nucleotides not described by the operon analysis used.
false
Sai Duriseti
annotation1920952
1
RocR Binding Site
range1920952
1
42
62
annotation1920953
1
Promoter
range1920953
1
96
135
annotation1920951
1
RocR Binding Site
range1920951
1
1
21
annotation1920955
1
AhrC
range1920955
1
113
131
BBa_J64804_sequence
1
tatgcaaaagaattttgcacttgctgaaattttcgctcgaaatatcagaatgtttttgcaccttgtcctcgaaaattgtagaaaacacacgaattcttgatttggcacagaacttgcatttatataaagggaaag
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z