BBa_K1112002 1 BBa_K1112002 Cluster PHA 2013-09-09T11:00:00Z 2015-05-08T01:09:11Z It is a naturally present sequence in Pseudomonas. Allows bioplastic (PHA) synthesis. PHA, or polyhydroxyaalkanoates, is a bioplastic produced in nature by bacterial fermentation of sugar or lipids. In our case it is produced by the fermentation of octanoic acid. Cluster of pha production in P. putida consists of 4 ORFs that are transcribed in the same direction: phaC1 and phaC2 genes, codify for two PHA sintases; phaZ gene, codifies for a despolimerase; and phaD gene, that codifies for a protein of the TetR family. In the opposite direction two genes that codify for fasinas (phaF and phaI) and structural proteins are found. false false _1423_ 0 12039 9 It's complicated false PHA, or polyhydroxyaalkanoates, is a bioplastic produced in nature by bacterial fermentation of sugar or lipids. In our case it is produced by the fermentation of octanoic acid. false Alba Iglesias Vilches annotation2366932 1 phaZ gene range2366932 1 2151 3008 annotation2366934 1 phaC2 gene range2366934 1 3027 4709 annotation2366930 1 phaC1 gene range2366930 1 409 2088 annotation2366929 1 PHA promoter range2366929 1 1 408 annotation2366935 1 PHA synthase 2 range2366935 1 3027 4709 annotation2366933 1 PHA depolymerase range2366933 1 2151 3008 annotation2366931 1 PHA synthase 1 range2366931 1 409 2088 BBa_K1112002_sequence 1 acagcggcctgttcacctgggaataccttgagcaactgtgcctgcgccaggaacaactgtgggcagaatacctcgatgagttgcaaaaggccggcaaatcccgcgacccagccgaatctgtggtcaagctcatgctctagcgcaaggcctgcggggtttagagcgcattttctaaattcatctgtttgaatgacttgcagacagcccagtgaagggctgtcttgcgcattacacgaaagtcgggtaaccaatgggtgtggcaagttccctgcatgactttgcaggtcggcagaacccacgcagcaccgctgttccttatcactggtcacccgagtagcagtaccgggctcagggctgtgcacccgccacagcaaccggtactcgtctcaggacaacggagcgtcgtatatgagtaacaagaacaacgatgagctacagcggcaggcctcggaaaacaccatggggctgaacccggtcatcggcatccgccgcaaggacctgttgagctcggcacgcaccgtgctgcgccaggccgtgcgccaaccgctgcacagcgccaagcatgtggctcactttggcctggagctgaagaacgtgttgctgggcaaatccagcctggccccggacagcgacgaccgtcgcttcaatgacccggcctggagcaacaacccgctgtaccgccgctacctgcaaacctacctggcctggcgcaaggagctgcaggactgggtgagcagcagcgacctgtccccccaggacatcagccgcggccagttcgtcatcaacctgatgaccgaggccatggcgccgaccaataccctgtccaacccggctgcggtcaaacgcttcttcgaaaccggcggcaagagcctgctcgatggcctgtccaacctggccaaggacatggtcaacaacggcggcatgcccagccaggtgaacatggatgccttcgaagtgggcaagaacctgggcaccagcgaaggcgcggtggtgtaccgcaacgatgtgctggaactgatccagtacagccccatcaccgagcaggtgcatgcccgtccgctgctggtggtgccaccgcagatcaacaagttctacgtgttcgacctcagcccggaaaagagcctggcgcgcttctgcctgcgctcgcagcagcagaccttcatcatcagctggcgcaacccgaccaaggcccagcgtgaatggggcctgtccacctacatcgatgcgctgaaagaagccgtcgacgcggtgctgtcgattaccggcagcaaggacctgaacatgctcggcgcctgctccggtggcatcacttgtaccgcactggtcgggcactatgccgcattgggcgagaacaaggtcaacgccctgaccgtgctggtcagcgtgctggacaccaccatggacaaccaggttgctttgtttgtcgacgagcagaccttggaggccgccaagcgccactcctatcaggcgggcgtgctggaaggcagcgaaatggccaaggtgttcgcctggatgcgccccaacgacctgatctggaactactgggtaaacaactacctgctcggcaatgagccccccgtgttcgacatcctgttctggaacaacgacaccacgcgcctgccggccgccttccacggcgacctgatcgaaatgttcaagagcaacccgctgacccgccccgacgccctgaaagtgtgcggcaccgcgatcgacctgaaacaggtcaaatgcgacatctacagcctcgccggcaccaacgaccacatcaccccctggccgtcatgctaccgctcggcacatctgttcggcggcaagatcgaattcgtactgtccaacagcgggcatatccagagcatcctcaacccgccgggcaacccgaaggcacgtttcatgaccggtgccgatcgcccgggtgacccggtggcctggcaggaaaatgccatcaagcatgcagactcctggtggctgcactggcagagttggctgggcgagcgtgccggcgcgctgaaaaaggcaccgacccgcctgggcaaccgtacctatgccgccggcgaagcctccccaggcacctacgttcacgagcgttgagttacagcgccgtggcggcctgcacggcgccacggtgtttacttcacccaagagtcacgtgcatgccgcaaccctatattttcaggaccgtcgagctggacaaccagtccatccgcaccgctgttcgccccggcaagccgcacctgacgccgttgctgatctttaacggcatcggcgccaacctcgagctggtgttcccgttcatcgatgcacttgacccggacctggaagtcatcgcctttgatgtgcccggggtcggcggctcgtctacgccacgcaacccgtaccgcttccctgggctggccaagctgaccgcgcggatgctcgaaaacctcgactacggccaggtcaacgtcatcggcgtgtcctggggcggcgccctggcccagcagtttgctcacgattaccccgagcgctgcaagaagctggtgctggccgccaccgctgccggtgcggtaatggtgccaggcaagcccaaggtgctgtggatgatggccagcccccggcgttacgtgcagccatcgcatgtcatccgcattgcgccgatgatctatggcggcggcttccgacgtgaccccgacctggccatgcaccatgccgccaaggtgcgctccggcggcaagctgggctactactggcagctgttcgcagggctcggctggaccagcatccactggctgcacaagatccggcagcccaccctggtactggctggcgacgacgacccgttgatcccgctgatcaacatgcgcctgctggcctggcggattcccaatgcccagctacacattatcgacgacggccatctgttcctgatcaccagtgccgaagccgtcgccccgatcatcatgaagttcctgcaggaagaacgtcagcgtgcggtcatgcatccccgtccggcctcggtagagcagcgctgaagacgagggagtgttgccatgacagacaaaccggccaaaggatcgacaacgctccccgccacccgcatgaacgtgcagaacgccatcctcggcctgcgcggccgcgacctgctttccacgctgcgcaacgtcggccgccacggcctgcgccacccgctgcataccgcgcatcatctgctggcgcttggcgggcagttggggcgggtgatgctgggggacacgccctaccagccgaacccgcgtgacgcacgcttcagtgacccgacctggagccagaacccgttctaccgccgcggcctgcaagcctatctggcctggcagaagcagacacgccagtggatcgatgaaagccatttgaacgacgatgatcgagcccgcgcccacttcctgttcaacctgatcaacgatgcgctggcgcccagcaactcactgctcaatccgcaggcggtcaaggggctgttcaacaccggcggccagagcctggtgcgcggcgtggctcacctgctcgacgacctgcgtcacaacgatgggctgcctcgtcaggtggacgagcgcgccttcgaagtgggcgttaacctggccgcaacccctggcgcagtggtatttcgcaacgagctgctggagctgatccagtactcgccgatgagcgaaaagcagcacgcacgcccactgctggtcgtgccgcctcagatcaacaggttctacatcttcgacctcagcgcgaccaacagcttcgtccagtacatgctcaaaagcggcttgcaggtgttcatggtcagctggagcaaccccgacccacgccaccgtgaatggggcctttccagctatgtgcaagccctggaggaagcgctcaatgcctgccgcagtatcagcggcaaccgcgaccccaacctgatgggtgcctgtgccggcggcctgaccatggccgcactgcaaggccatctgcaagccaagaagcaattgcgccgggtgcgcagtgccacgtatctggtcagcttgctggacagcaagttcgaaagcccggccagcctgttcgccgatgagcagaccatcgaagcggccaagcgacgctcctatcagcgtggcgtgctggacggtggtgaagtggcgcggatcttcgcctggatgcggcccaacgacctgatctggaactactgggtaaacaactacctgctcggcaagacaccgcctgcgttcgacatcctgtactggaatgccgacagcacgcgcctgcccgccgcgctgcatggcgacctgctggagtttttcaagctcaaccccttgacctacgcgtccgggctggaggtgtgcggtacgccgatcgacctgcagcaggtcaatatcgacagctttaccgtggccggcagcaacgaccacatcacaccatgggatgcggtgtaccgctcggccttgctgctgggtggcgagcggcgcttcgtgctggccaacagcgggcatatccagagcatcatcaacccgccaggcaaccccaaggcctactacctggccaaccccaagctgagcagcgacccacgcgcctggttccacgacgccaagcgcagtgaaggcagctggtggccgttgtggctggagtggatcaccgcacgctccggcctgctcaaggcaccgcgtactgaactgggcaacgccacttacccactgctaggccccgcgccaggcacctacgtgctgacccgatgagctgctgactggatgaaaacccgcgatcgtatccttgaatgcgccctgcagttgttcaaccagcagggcgaacccaacgtatccaccctggaaattgccaacgaactcggcatcagcccaggcaacctgtactaccacttccatggcaaggagcccttggttctgggcttgttcgagcgttttgaagaagcgttgatgccgttgctggacccaccgctggaggtgcggctggacgcagaggattactggctgttcctgcacctgatcgt igem2sbol 1 iGEM to SBOL conversion Conversion of the iGEM parts registry to SBOL2.1 James Alastair McLaughlin Chris J. Myers 2017-03-06T15:00:00.000Z