BBa_K173017 1 adhB alcohol dehydrogenase II from Z. mobilis (codon optimized for E. coli) 2009-10-14T11:00:00Z 2015-05-08T01:10:57Z a a false false _281_ 0 2583 9 Not in stock true a false Lorenzo Pasotti, Paolo Magni BBa_B0012 1 BBa_B0012 TE from coliphageT7 2003-01-31T12:00:00Z 2015-08-31T04:07:20Z Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>. Released HQ 2013 Transcription terminator for the <i>E.coli</i> RNA polymerase. false false _1_ 0 24 7 In stock false <P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator. false Reshma Shetty annotation7020 1 BBa_B0012 range7020 1 1 41 annotation1687 1 stop range1687 1 34 34 annotation1686 1 T7 TE range1686 1 8 27 annotation1690 1 polya range1690 1 28 41 BBa_K173016 1 pdc pyruvate decarboxylase from Z. mobilis (codon optimized for E. coli) 2009-10-14T11:00:00Z 2015-05-08T01:10:57Z a a false false _281_ 0 2583 9 Not in stock true a false Lorenzo Pasotti, Paolo Magni BBa_K1122678 1 BBa_K1122678 pSpac - LacZ - pdc- adhB 2013-08-29T11:00:00Z 2015-05-08T01:09:15Z synthetic This translational unit enables expression of pyruvate decarboxylase (pdc) and alcohol dehydrogenase B (adhB) in ''Bacillus subtilis'' using xylose induction. Production of pdc and adhB enzymes allows for conversion of pyruvate to ethanol via an acetaldehyde intermediate. false false _1433_ 0 18014 9 Not in stock false Part was made by conversion of EdiBrick - pdc - adhB translational unit by MABEL using standardised primers. false Aleksandra Lewicka, Jan Lyczakowski component2333655 1 BBa_K173003 component2333640 1 BBa_K1122677 annotation2333640 1 BBa_K1122677 range2333640 1 1 390 annotation2333655 1 BBa_K173003 range2333655 1 399 3450 BBa_B0030 1 BBa_B0030 RBS.1 (strong) -- modified from R. Weiss 2003-01-31T12:00:00Z 2015-08-31T04:07:20Z Released HQ 2013 Strong RBS based on Ron Weiss thesis. Strength is considered relative to <bb_part>BBa_B0031</bb_part>, <bb_part>BBa_B0032</bb_part>, <bb_part>BBa_B0033</bb_part>. false true _44_46_ 0 24 7 In stock false Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix (&quot;orig&quot; in figure 4-14 of Ron Weiss thesis). <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS. Contact info <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a> true Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003. annotation1702 1 RBS range1702 1 8 12 annotation7025 1 BBa_B0030 range7025 1 1 15 annotation1701 1 RBS-1\Strong range1701 1 1 15 BBa_K173003 1 BBa_K173003 pdc and adhB protein generator 2009-10-15T11:00:00Z 2015-05-08T01:10:57Z a a false false _281_ 0 2583 9 It's complicated true a false Lorenzo Pasotti, Giulio Chiesa, Manuel Lupotto, Paolo Magni component2044289 1 BBa_K173016 component2044293 1 BBa_K173017 component2044287 1 BBa_B0030 component2044296 1 BBa_B0012 component2044294 1 BBa_B0010 component2044291 1 BBa_B0030 annotation2044293 1 BBa_K173017 range2044293 1 1761 2915 annotation2044287 1 BBa_B0030 range2044287 1 1 15 annotation2044296 1 BBa_B0012 range2044296 1 3012 3052 annotation2044289 1 BBa_K173016 range2044289 1 22 1731 annotation2044291 1 BBa_B0030 range2044291 1 1740 1754 annotation2044294 1 BBa_B0010 range2044294 1 2924 3003 BBa_B0010 1 BBa_B0010 T1 from E. coli rrnB 2003-11-19T12:00:00Z 2015-08-31T04:07:20Z Transcriptional terminator consisting of a 64 bp stem-loop. false false _1_ 0 24 7 In stock false true Randy Rettberg annotation7018 1 BBa_B0010 range7018 1 1 80 annotation4184 1 stem_loop range4184 1 12 55 BBa_K1122677 1 BBa_K1122677 pSpac - LacZ 2013-08-29T11:00:00Z 2015-05-08T01:09:15Z synthetic This part encodes a pSpac - xylose inducible promoter for ''B. subtilis'' followed by LacZ alpha peptide. false false _1433_ 0 18014 9 Not in stock false The part can be generated from any EdiBrick (J33207) controlled part with a single MABEL process using standardised primers false Aleksandra Lewicka BBa_B0010_sequence 1 ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc BBa_K1122678_sequence 1 ctcatgttatatcccgccgttaaccaccatcaaacaggattttcgcctgctggggcaaaccagcgtggaccgcttgcaaaaagttgttgactttatctacaaggtgtggcataatgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgaccatgattacggattcactggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttgcagcacatccccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcgaatggcgctttgcctggtttccggcaccagaagcggtgccggaaagctggctggagtgatactagagattaaagaggagaaatactagatgtcttataccgtggggacctatctggcagaacgcctggttcaaattgggctgaaacaccacttcgctgttgccggtgattataacctggtgctgctggacaatctgctgctgaataaaaacatggagcaagtctattgctgtaacgaactgaactgtggctttagcgctgaaggctatgcccgtgccaaaggtgccgccgctgctgttgtaacctatagtgtgggtgccctgagtgctttcgatgctattggaggggcttatgctgaaaacctgccggtaatcctgatttctggtgccccgaacaataacgatcatgccgccggtcatgtgctgcatcatgctctgggtaaaaccgactatcattatcagctggaaatggccaaaaacattactgccgctgccgaggcgatttatactccggaagaggctccggccaaaattgatcatgtcatcaaaaccgcactgcgtgagaaaaaaccggtctatctggaaattgcttgtaacattgcctcaatgccgtgtgccgctcctggtccggctagtgccctgtttaacgatgaagcttcggatgaagcaagcctgaatgctgccgttgaagaaacgctgaaattcattgccaaccgtgacaaagtcgctgtactggtgggttctaaactgcgcgctgctggtgctgaggaagccgctgtaaaattcgctgacgccctgggtggagctgtagcaaccatggctgccgccaaatccttctttcctgaggagaatcctcattatatcggcacgagctggggcgaggtttcatatccaggggtggagaaaaccatgaaagaggcagacgccgttatcgctctggctcctgtgttcaatgactattccaccaccgggtggactgatattcctgacccgaaaaaactggtgctggctgaacctcgttctgttgtggtgaatggcatccgttttccgagcgttcacctgaaagactatctgactcgtctggcccaaaaagtgtccaaaaaaactggcgctctggacttctttaaaagtctgaatgccggggaactgaaaaaagctgctccggccgatccttctgctcctctggttaatgccgagattgctcgtcaagttgaagctctgctgactccgaataccaccgttatcgccgaaactggtgattcctggttcaatgcccagcgtatgaaactgccgaatggtgctcgtgttgagtatgagatgcaatggggccatattggttggtctgtgcctgctgcttttggttatgccgttggtgctcctgaacgtcgtaacatcctgatggtaggggatggatcatttcaactgaccgcccaggaagttgctcaaatggttcgtctgaaactgcctgtgatcatctttctgattaacaactatggctatacgatcgaggtcatgattcacgatggtccgtataacaacattaaaaactgggactatgctggtctgatggaggtgttcaatggtaatggcgggtatgattctggagccgggaaaggcctgaaagcgaaaaccgggggtgagctggctgaggctattaaagttgccctggccaatacagatgggcctaccctgatcgaatgctttattgggcgtgaggactgtacagaagaactggtaaaatgggggaaacgtgttgccgctgctaacagccgtaaaccggtgaataaactgctgtaataatactagagattaaagaggagaaatactagatggcatcaagcaccttttatatcccgtttgttaatgaaatgggcgagggttctctggaaaaagcgatcaaagacctgaatggtagtgggttcaaaaatgccctgattgtgtcagacgccttcatgaataaaagtggcgtggtgaaacaggttgctgatctgctgaaagcacagggtatcaatagcgccgtgtatgacggtgttatgccgaatccgaccgttacagccgtactggagggactgaaaatcctgaaagacaacaacagcgacttcgtgatttctctgggtggtggttctccacatgattgtgccaaagccattgccctggtggctacaaatggaggtgaagtgaaagattatgaggggatcgacaaaagcaaaaaaccggcactgcctctgatgagcatcaataccacagcgggtacagcatctgagatgactcgtttctgtattatcaccgacgaggttcgccatgtgaaaatggccatcgtggatcgtcatgttacaccgatggttagcgtgaatgatcctctgctgatggtgggtatgcctaaagggctgactgccgctacaggaatggacgccctgactcatgccttcgaagcctattctagcaccgccgctactcctattaccgacgcttgtgccctgaaagctgcctctatgattgccaaaaatctgaaaaccgcttgtgacaacggcaaagacatgcctgctcgtgaggccatggcctatgcccaatttctggccggtatggcgtttaataacgcctctctgggctatgttcatgctatggctcaccaactgggaggctattataacctgccacacggcgtctgtaatgctgtgctgctgcctcatgttctggcctataatgccagcgtggttgctggtcgcctgaaagatgttggagtggctatgggtctggatattgccaatctgggggacaaagagggtgctgaagcgacaattcaagccgtccgtgacctggctgcttctatcggaatcccggcaaacctgacagaactgggcgccaaaaaagaagatgtgcctctgctggctgatcatgctctgaaagacgcttgtgctctgactaatcctcgtcagggagatcagaaagaagtcgaggagctgtttctgagtgccttttgataatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata BBa_K173016_sequence 1 atgtcttataccgtggggacctatctggcagaacgcctggttcaaattgggctgaaacaccacttcgctgttgccggtgattataacctggtgctgctggacaatctgctgctgaataaaaacatggagcaagtctattgctgtaacgaactgaactgtggctttagcgctgaaggctatgcccgtgccaaaggtgccgccgctgctgttgtaacctatagtgtgggtgccctgagtgctttcgatgctattggaggggcttatgctgaaaacctgccggtaatcctgatttctggtgccccgaacaataacgatcatgccgccggtcatgtgctgcatcatgctctgggtaaaaccgactatcattatcagctggaaatggccaaaaacattactgccgctgccgaggcgatttatactccggaagaggctccggccaaaattgatcatgtcatcaaaaccgcactgcgtgagaaaaaaccggtctatctggaaattgcttgtaacattgcctcaatgccgtgtgccgctcctggtccggctagtgccctgtttaacgatgaagcttcggatgaagcaagcctgaatgctgccgttgaagaaacgctgaaattcattgccaaccgtgacaaagtcgctgtactggtgggttctaaactgcgcgctgctggtgctgaggaagccgctgtaaaattcgctgacgccctgggtggagctgtagcaaccatggctgccgccaaatccttctttcctgaggagaatcctcattatatcggcacgagctggggcgaggtttcatatccaggggtggagaaaaccatgaaagaggcagacgccgttatcgctctggctcctgtgttcaatgactattccaccaccgggtggactgatattcctgacccgaaaaaactggtgctggctgaacctcgttctgttgtggtgaatggcatccgttttccgagcgttcacctgaaagactatctgactcgtctggcccaaaaagtgtccaaaaaaactggcgctctggacttctttaaaagtctgaatgccggggaactgaaaaaagctgctccggccgatccttctgctcctctggttaatgccgagattgctcgtcaagttgaagctctgctgactccgaataccaccgttatcgccgaaactggtgattcctggttcaatgcccagcgtatgaaactgccgaatggtgctcgtgttgagtatgagatgcaatggggccatattggttggtctgtgcctgctgcttttggttatgccgttggtgctcctgaacgtcgtaacatcctgatggtaggggatggatcatttcaactgaccgcccaggaagttgctcaaatggttcgtctgaaactgcctgtgatcatctttctgattaacaactatggctatacgatcgaggtcatgattcacgatggtccgtataacaacattaaaaactgggactatgctggtctgatggaggtgttcaatggtaatggcgggtatgattctggagccgggaaaggcctgaaagcgaaaaccgggggtgagctggctgaggctattaaagttgccctggccaatacagatgggcctaccctgatcgaatgctttattgggcgtgaggactgtacagaagaactggtaaaatgggggaaacgtgttgccgctgctaacagccgtaaaccggtgaataaactgctgtaataa BBa_B0030_sequence 1 attaaagaggagaaa BBa_K173003_sequence 1 attaaagaggagaaatactagatgtcttataccgtggggacctatctggcagaacgcctggttcaaattgggctgaaacaccacttcgctgttgccggtgattataacctggtgctgctggacaatctgctgctgaataaaaacatggagcaagtctattgctgtaacgaactgaactgtggctttagcgctgaaggctatgcccgtgccaaaggtgccgccgctgctgttgtaacctatagtgtgggtgccctgagtgctttcgatgctattggaggggcttatgctgaaaacctgccggtaatcctgatttctggtgccccgaacaataacgatcatgccgccggtcatgtgctgcatcatgctctgggtaaaaccgactatcattatcagctggaaatggccaaaaacattactgccgctgccgaggcgatttatactccggaagaggctccggccaaaattgatcatgtcatcaaaaccgcactgcgtgagaaaaaaccggtctatctggaaattgcttgtaacattgcctcaatgccgtgtgccgctcctggtccggctagtgccctgtttaacgatgaagcttcggatgaagcaagcctgaatgctgccgttgaagaaacgctgaaattcattgccaaccgtgacaaagtcgctgtactggtgggttctaaactgcgcgctgctggtgctgaggaagccgctgtaaaattcgctgacgccctgggtggagctgtagcaaccatggctgccgccaaatccttctttcctgaggagaatcctcattatatcggcacgagctggggcgaggtttcatatccaggggtggagaaaaccatgaaagaggcagacgccgttatcgctctggctcctgtgttcaatgactattccaccaccgggtggactgatattcctgacccgaaaaaactggtgctggctgaacctcgttctgttgtggtgaatggcatccgttttccgagcgttcacctgaaagactatctgactcgtctggcccaaaaagtgtccaaaaaaactggcgctctggacttctttaaaagtctgaatgccggggaactgaaaaaagctgctccggccgatccttctgctcctctggttaatgccgagattgctcgtcaagttgaagctctgctgactccgaataccaccgttatcgccgaaactggtgattcctggttcaatgcccagcgtatgaaactgccgaatggtgctcgtgttgagtatgagatgcaatggggccatattggttggtctgtgcctgctgcttttggttatgccgttggtgctcctgaacgtcgtaacatcctgatggtaggggatggatcatttcaactgaccgcccaggaagttgctcaaatggttcgtctgaaactgcctgtgatcatctttctgattaacaactatggctatacgatcgaggtcatgattcacgatggtccgtataacaacattaaaaactgggactatgctggtctgatggaggtgttcaatggtaatggcgggtatgattctggagccgggaaaggcctgaaagcgaaaaccgggggtgagctggctgaggctattaaagttgccctggccaatacagatgggcctaccctgatcgaatgctttattgggcgtgaggactgtacagaagaactggtaaaatgggggaaacgtgttgccgctgctaacagccgtaaaccggtgaataaactgctgtaataatactagagattaaagaggagaaatactagatggcatcaagcaccttttatatcccgtttgttaatgaaatgggcgagggttctctggaaaaagcgatcaaagacctgaatggtagtgggttcaaaaatgccctgattgtgtcagacgccttcatgaataaaagtggcgtggtgaaacaggttgctgatctgctgaaagcacagggtatcaatagcgccgtgtatgacggtgttatgccgaatccgaccgttacagccgtactggagggactgaaaatcctgaaagacaacaacagcgacttcgtgatttctctgggtggtggttctccacatgattgtgccaaagccattgccctggtggctacaaatggaggtgaagtgaaagattatgaggggatcgacaaaagcaaaaaaccggcactgcctctgatgagcatcaataccacagcgggtacagcatctgagatgactcgtttctgtattatcaccgacgaggttcgccatgtgaaaatggccatcgtggatcgtcatgttacaccgatggttagcgtgaatgatcctctgctgatggtgggtatgcctaaagggctgactgccgctacaggaatggacgccctgactcatgccttcgaagcctattctagcaccgccgctactcctattaccgacgcttgtgccctgaaagctgcctctatgattgccaaaaatctgaaaaccgcttgtgacaacggcaaagacatgcctgctcgtgaggccatggcctatgcccaatttctggccggtatggcgtttaataacgcctctctgggctatgttcatgctatggctcaccaactgggaggctattataacctgccacacggcgtctgtaatgctgtgctgctgcctcatgttctggcctataatgccagcgtggttgctggtcgcctgaaagatgttggagtggctatgggtctggatattgccaatctgggggacaaagagggtgctgaagcgacaattcaagccgtccgtgacctggctgcttctatcggaatcccggcaaacctgacagaactgggcgccaaaaaagaagatgtgcctctgctggctgatcatgctctgaaagacgcttgtgctctgactaatcctcgtcagggagatcagaaagaagtcgaggagctgtttctgagtgccttttgataatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata BBa_K1122677_sequence 1 ctcatgttatatcccgccgttaaccaccatcaaacaggattttcgcctgctggggcaaaccagcgtggaccgcttgcaaaaagttgttgactttatctacaaggtgtggcataatgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgaccatgattacggattcactggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttgcagcacatccccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcgaatggcgctttgcctggtttccggcaccagaagcggtgccggaaagctggctggagtga BBa_B0012_sequence 1 tcacactggctcaccttcgggtgggcctttctgcgtttata BBa_K173017_sequence 1 atggcatcaagcaccttttatatcccgtttgttaatgaaatgggcgagggttctctggaaaaagcgatcaaagacctgaatggtagtgggttcaaaaatgccctgattgtgtcagacgccttcatgaataaaagtggcgtggtgaaacaggttgctgatctgctgaaagcacagggtatcaatagcgccgtgtatgacggtgttatgccgaatccgaccgttacagccgtactggagggactgaaaatcctgaaagacaacaacagcgacttcgtgatttctctgggtggtggttctccacatgattgtgccaaagccattgccctggtggctacaaatggaggtgaagtgaaagattatgaggggatcgacaaaagcaaaaaaccggcactgcctctgatgagcatcaataccacagcgggtacagcatctgagatgactcgtttctgtattatcaccgacgaggttcgccatgtgaaaatggccatcgtggatcgtcatgttacaccgatggttagcgtgaatgatcctctgctgatggtgggtatgcctaaagggctgactgccgctacaggaatggacgccctgactcatgccttcgaagcctattctagcaccgccgctactcctattaccgacgcttgtgccctgaaagctgcctctatgattgccaaaaatctgaaaaccgcttgtgacaacggcaaagacatgcctgctcgtgaggccatggcctatgcccaatttctggccggtatggcgtttaataacgcctctctgggctatgttcatgctatggctcaccaactgggaggctattataacctgccacacggcgtctgtaatgctgtgctgctgcctcatgttctggcctataatgccagcgtggttgctggtcgcctgaaagatgttggagtggctatgggtctggatattgccaatctgggggacaaagagggtgctgaagcgacaattcaagccgtccgtgacctggctgcttctatcggaatcccggcaaacctgacagaactgggcgccaaaaaagaagatgtgcctctgctggctgatcatgctctgaaagacgcttgtgctctgactaatcctcgtcagggagatcagaaagaagtcgaggagctgtttctgagtgccttttgataa igem2sbol 1 iGEM to SBOL conversion Conversion of the iGEM parts registry to SBOL2.1 Chris J. Myers James Alastair McLaughlin 2017-03-06T15:00:00.000Z