BBa_B0034 1 BBa_B0034 RBS (Elowitz 1999) -- defines RBS efficiency 2003-01-31T12:00:00Z 2015-08-31T04:07:20Z Released HQ 2013 RBS based on Elowitz repressilator. false true _1_ 0 24 7 In stock false Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS. Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a> true Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003. annotation23325 1 conserved range23325 1 5 8 BBa_K1149022 1 BBa_K1149022 pelB (E.coli optimized) 2013-09-09T11:00:00Z 2015-05-08T01:09:26Z secreted protein when attached to N terminus It is an E.coli codon optimised version of pelB tag fhttp://parts.igem.org/wiki/index.php?title=Part:BBa_K208004 BBa_K208004]. false false _1461_ 0 17968 9 Not in stock false E.coli optimised. false Margarita Kopniczky BBa_K1149005 1 BBa_K1149005 pelB-pudA expression 2013-09-13T11:00:00Z 2015-05-08T01:09:26Z Former name: Comamonas acidovorans TB-35 Current name: Delftia acidovorans Encodes polyurethane esterase, break down ester bonds in polyurethane false false _1461_ 0 17968 9 Not in stock false E.coli optimized false Margarita Kopniczky component2341652 1 BBa_K206000 component2341658 1 BBa_S05221 component2341654 1 BBa_B0034 annotation2341654 1 BBa_B0034 range2341654 1 139 150 annotation2341658 1 BBa_S05221 range2341658 1 157 1893 annotation2341652 1 BBa_K206000 range2341652 1 1 130 BBa_K206000 1 pBAD pBAD strong 2009-10-13T11:00:00Z 2015-05-08T01:11:23Z The sequence was obtained by applying all mutations that upregulated AraC binding and subsequent promoter activity listed in reference [1]. Released HQ 2013 pBAD is an <i>E.coli</i> promoter that is induced by L-arabinose. K206000 is a mutagenized pBAD promoter that is responsive to lower concentrations of arabinose than wild type (<partinfo>I13453</partinfo>) and, additionally, exhibits a higher maximum of protein expression as measured by coupling to a fluorescent reporter. false false _307_ 0 4172 9 In stock true There were no special design considerations. false Amelia Hardjasa annotation2049254 1 AraI2 range2049254 1 61 78 annotation2049252 1 promoter range2049252 1 1 131 annotation2049253 1 AraI1 range2049253 1 40 57 BBa_K1149033 1 BBa_K1149033 pudA-his 2013-09-13T11:00:00Z 2015-05-08T01:09:26Z Former name: Comamonas acidovorans TB-35 Current name: Delftia acidovorans Encodes polyurethane esterase, break down ester bonds in polyurethane false false _1461_ 0 17968 9 Not in stock false E.coli optimized false Margarita Kopniczky annotation2341642 1 6his+3stop range2341642 1 1646 1671 BBa_S05221 1 BBa_S05221 K1149022:K1149033 2013-09-13T11:00:00Z 2015-05-08T01:14:51Z false false _9_ 0 17968 9 Not in stock false false Margarita Kopniczky component2341646 1 BBa_K1149022 component2341648 1 BBa_K1149033 annotation2341646 1 BBa_K1149022 range2341646 1 1 66 annotation2341648 1 BBa_K1149033 range2341648 1 67 1737 BBa_B0034_sequence 1 aaagaggagaaa BBa_K1149022_sequence 1 atgaaatatctgctgccgaccgcagcagcgggtctgctgctgctggcagcacagcctgcaatggca BBa_K1149033_sequence 1 atgaatagccgtagcctgaccaaagcaattcgttttccgaccattctggcactggcaggttttagcgttctgggtgcatgtggtggtagcgataatgatagcagcagtaataatcagggtgcaccggcagttgcaattaccgttgcaggtcaggttcaggcagttgatcgtctgggtatgcgtcgttattttggtattccgtttgcagcaccgcctgttggtaatctgcgttggatgcctccggcaccgcctcagagttgggctgcaccgctggcaaaaacccagagcaatgcaccgtgtatgcagaccggtgcaaccgatccgctgcgtctgccgaatggcaccgaagattgtctgtatctggatgttcatgctccggcaaccggtgaaggtccgtttccggttatggtttggattcatggtggtgcatttagcattggtggcaccattacctatgcagatccgagtccgctggttagcaaaggtgttattgttgtgaatattgcctatcgtatgggtgcaatgggttttctgggtcatccgagcctgcgtgcagcagatggcaccgttggtaattatggtattatggatcagcaggcagcactgcgttgggttcaggataacattgcagcatttggtggtgataaaagcaacgtgaccatttttggtgaaagtgccggtggttttagtgttatgacccatctggcaagtccgctgagcaaaggtctgtttgcaaaagcaattgttcagagcggtggttatggctttgatcgccagctgacccaggcacagctggaagcacagagcaccagcattgttaatagtgccctggcagcagccggtgttagctgtccgaccgttgatgcagcatgtctgcgtggtctgagcgcagaactggtgaataatcagctggcaaccgcatttaccaccgcaaattggagtccggttccgagcgtggatggtaaagttctgccgaaaagcattaaagcaacctttgttgccggtgagaataacaaagttccgctggtgaatggtagcaatcaggatgaatggtcatattttgttgcaagccgtgaactggttgccggtccgctgaccgcagcccagtatccgagctatctgcaaaccagcctgggtctgccaccgagcctggccaccgtttatccgctgacagattatggcaccaataccgcacagcagccgagtctggcagcaaccgcagccggtacagatatgcattttagttgtccggcactgaatctgagcaaacgtgttctgagccaggcaaccccgatttttatgtatgaatttcgtgatcgtaccgccattccgagcattggtcgtaataccattagctttaaccagggtgcaggtcatacctatgaactgcaatacctgtttaatctgcgcgatctggaaaccgcagaacatcgtgatctgcaagcaagcatggcacgttattggaccaattttgcacgtaccagcaatccgaataatggtgatccggttgcgaccagctggcctgcatttaccggtccgaccaaagttctgggtctggatgtggcaagcgcaggcggtattcgcgaactggccacctttgaaaccgatcataaatgtaataccgcatggaccagcctgacctttcatcatcatcaccatcactaataatga BBa_K206000_sequence 1 acattgattatttgcacggcgtcacactttgctatgccatagcaagatagtccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccataccgtttttttgggctagc BBa_K1149005_sequence 1 acattgattatttgcacggcgtcacactttgctatgccatagcaagatagtccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccataccgtttttttgggctagctactagagaaagaggagaaatactagatgaaatatctgctgccgaccgcagcagcgggtctgctgctgctggcagcacagcctgcaatggcaatgaatagccgtagcctgaccaaagcaattcgttttccgaccattctggcactggcaggttttagcgttctgggtgcatgtggtggtagcgataatgatagcagcagtaataatcagggtgcaccggcagttgcaattaccgttgcaggtcaggttcaggcagttgatcgtctgggtatgcgtcgttattttggtattccgtttgcagcaccgcctgttggtaatctgcgttggatgcctccggcaccgcctcagagttgggctgcaccgctggcaaaaacccagagcaatgcaccgtgtatgcagaccggtgcaaccgatccgctgcgtctgccgaatggcaccgaagattgtctgtatctggatgttcatgctccggcaaccggtgaaggtccgtttccggttatggtttggattcatggtggtgcatttagcattggtggcaccattacctatgcagatccgagtccgctggttagcaaaggtgttattgttgtgaatattgcctatcgtatgggtgcaatgggttttctgggtcatccgagcctgcgtgcagcagatggcaccgttggtaattatggtattatggatcagcaggcagcactgcgttgggttcaggataacattgcagcatttggtggtgataaaagcaacgtgaccatttttggtgaaagtgccggtggttttagtgttatgacccatctggcaagtccgctgagcaaaggtctgtttgcaaaagcaattgttcagagcggtggttatggctttgatcgccagctgacccaggcacagctggaagcacagagcaccagcattgttaatagtgccctggcagcagccggtgttagctgtccgaccgttgatgcagcatgtctgcgtggtctgagcgcagaactggtgaataatcagctggcaaccgcatttaccaccgcaaattggagtccggttccgagcgtggatggtaaagttctgccgaaaagcattaaagcaacctttgttgccggtgagaataacaaagttccgctggtgaatggtagcaatcaggatgaatggtcatattttgttgcaagccgtgaactggttgccggtccgctgaccgcagcccagtatccgagctatctgcaaaccagcctgggtctgccaccgagcctggccaccgtttatccgctgacagattatggcaccaataccgcacagcagccgagtctggcagcaaccgcagccggtacagatatgcattttagttgtccggcactgaatctgagcaaacgtgttctgagccaggcaaccccgatttttatgtatgaatttcgtgatcgtaccgccattccgagcattggtcgtaataccattagctttaaccagggtgcaggtcatacctatgaactgcaatacctgtttaatctgcgcgatctggaaaccgcagaacatcgtgatctgcaagcaagcatggcacgttattggaccaattttgcacgtaccagcaatccgaataatggtgatccggttgcgaccagctggcctgcatttaccggtccgaccaaagttctgggtctggatgtggcaagcgcaggcggtattcgcgaactggccacctttgaaaccgatcataaatgtaataccgcatggaccagcctgacctttcatcatcatcaccatcactaataatga BBa_S05221_sequence 1 atgaaatatctgctgccgaccgcagcagcgggtctgctgctgctggcagcacagcctgcaatggcaatgaatagccgtagcctgaccaaagcaattcgttttccgaccattctggcactggcaggttttagcgttctgggtgcatgtggtggtagcgataatgatagcagcagtaataatcagggtgcaccggcagttgcaattaccgttgcaggtcaggttcaggcagttgatcgtctgggtatgcgtcgttattttggtattccgtttgcagcaccgcctgttggtaatctgcgttggatgcctccggcaccgcctcagagttgggctgcaccgctggcaaaaacccagagcaatgcaccgtgtatgcagaccggtgcaaccgatccgctgcgtctgccgaatggcaccgaagattgtctgtatctggatgttcatgctccggcaaccggtgaaggtccgtttccggttatggtttggattcatggtggtgcatttagcattggtggcaccattacctatgcagatccgagtccgctggttagcaaaggtgttattgttgtgaatattgcctatcgtatgggtgcaatgggttttctgggtcatccgagcctgcgtgcagcagatggcaccgttggtaattatggtattatggatcagcaggcagcactgcgttgggttcaggataacattgcagcatttggtggtgataaaagcaacgtgaccatttttggtgaaagtgccggtggttttagtgttatgacccatctggcaagtccgctgagcaaaggtctgtttgcaaaagcaattgttcagagcggtggttatggctttgatcgccagctgacccaggcacagctggaagcacagagcaccagcattgttaatagtgccctggcagcagccggtgttagctgtccgaccgttgatgcagcatgtctgcgtggtctgagcgcagaactggtgaataatcagctggcaaccgcatttaccaccgcaaattggagtccggttccgagcgtggatggtaaagttctgccgaaaagcattaaagcaacctttgttgccggtgagaataacaaagttccgctggtgaatggtagcaatcaggatgaatggtcatattttgttgcaagccgtgaactggttgccggtccgctgaccgcagcccagtatccgagctatctgcaaaccagcctgggtctgccaccgagcctggccaccgtttatccgctgacagattatggcaccaataccgcacagcagccgagtctggcagcaaccgcagccggtacagatatgcattttagttgtccggcactgaatctgagcaaacgtgttctgagccaggcaaccccgatttttatgtatgaatttcgtgatcgtaccgccattccgagcattggtcgtaataccattagctttaaccagggtgcaggtcatacctatgaactgcaatacctgtttaatctgcgcgatctggaaaccgcagaacatcgtgatctgcaagcaagcatggcacgttattggaccaattttgcacgtaccagcaatccgaataatggtgatccggttgcgaccagctggcctgcatttaccggtccgaccaaagttctgggtctggatgtggcaagcgcaggcggtattcgcgaactggccacctttgaaaccgatcataaatgtaataccgcatggaccagcctgacctttcatcatcatcaccatcactaataatga igem2sbol 1 iGEM to SBOL conversion Conversion of the iGEM parts registry to SBOL2.1 Chris J. Myers James Alastair McLaughlin 2017-03-06T15:00:00.000Z