BBa_B0034 1 BBa_B0034 RBS (Elowitz 1999) -- defines RBS efficiency 2003-01-31T12:00:00Z 2015-08-31T04:07:20Z Released HQ 2013 RBS based on Elowitz repressilator. false true _1_ 0 24 7 In stock false Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS. Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a> true Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003. annotation23325 1 conserved range23325 1 5 8 BBa_K1149008 1 BBa_K1149008 Proteinase K (extracellular) 2013-09-12T11:00:00Z 2015-05-08T01:09:26Z Serratia sp. GF96 Encodes a peptidase from proteinase K family, breaks down polylactic acid. false false _1461_ 0 17968 9 It's complicated false E.coli optimized false Margarita Kopniczky component2340974 1 BBa_S05217 component2340967 1 BBa_B0034 component2340965 1 BBa_K206000 annotation2340974 1 BBa_S05217 range2340974 1 157 2103 annotation2340965 1 BBa_K206000 range2340965 1 1 130 annotation2340967 1 BBa_B0034 range2340967 1 139 150 BBa_K515005 1 BBa_K515005 superfolder GFP (sfGFP) 2011-09-06T11:00:00Z 2015-05-08T01:12:32Z - a translational unit of superfolded GFP false false _680_ 0 10179 9 Not in stock false - false Atipat Patharagulpong annotation2126851 1 rbs range2126851 1 1 24 annotation2126852 1 sfGFP range2126852 1 25 744 BBa_K206000 1 pBAD pBAD strong 2009-10-13T11:00:00Z 2015-05-08T01:11:23Z The sequence was obtained by applying all mutations that upregulated AraC binding and subsequent promoter activity listed in reference [1]. Released HQ 2013 pBAD is an <i>E.coli</i> promoter that is induced by L-arabinose. K206000 is a mutagenized pBAD promoter that is responsive to lower concentrations of arabinose than wild type (<partinfo>I13453</partinfo>) and, additionally, exhibits a higher maximum of protein expression as measured by coupling to a fluorescent reporter. false false _307_ 0 4172 9 In stock true There were no special design considerations. false Amelia Hardjasa annotation2049254 1 AraI2 range2049254 1 61 78 annotation2049253 1 AraI1 range2049253 1 40 57 annotation2049252 1 promoter range2049252 1 1 131 BBa_K1149035 1 BBa_K1149035 Proteinase K 2013-09-12T11:00:00Z 2015-05-08T01:09:26Z Encodes a peptidase from proteinase K family, breaks down polylactic acid false false _1461_ 0 17968 9 Not in stock false E.coli optimized false Margarita Kopniczky annotation2340864 1 6his+stop range2340864 1 1116 1137 BBa_K1149023 1 BBa_K1149023 pelB2 2013-09-12T11:00:00Z 2015-05-08T01:09:26Z secretes protein false false _1461_ 0 17968 9 In stock false E.coli optimized false Margarita Kopniczky BBa_S05217 1 BBa_S05217 K1149023:K1149035 2013-09-12T11:00:00Z 2015-05-08T01:14:51Z false false _9_ 0 17968 9 Not in stock false false Margarita Kopniczky component2340929 1 BBa_K1149035 component2340932 1 BBa_K515005 component2340927 1 BBa_K1149023 annotation2340932 1 BBa_K515005 range2340932 1 1204 1947 annotation2340929 1 BBa_K1149035 range2340929 1 67 1203 annotation2340927 1 BBa_K1149023 range2340927 1 1 66 BBa_K515005_sequence 1 aaatcaaattaaggaggtaagataatgcgtaaaggcgaagaactgttcacgggcgtagttccgattctggtcgagctggacggcgatgtgaacggtcataagtttagcgttcgcggtgaaggtgagggcgacgcgaccaacggcaaactgaccctgaagttcatctgcaccaccggtaaactgccggtgccttggccgaccttggtgacgacgttgacgtatggcgtgcagtgttttgcgcgttatccggaccacatgaaacaacacgatttcttcaaatctgcgatgccggagggttacgtccaggagcgtaccatttccttcaaggatgatggctactacaaaactcgcgcagaggttaagtttgaaggtgacacgctggtcaatcgtatcgaattgaagggtatcgactttaaagaggatggtaacattctgggccataaactggagtataacttcaacagccataatgtttacattacggcagacaagcaaaagaacggcatcaaggccaatttcaagattcgccacaatgttgaggacggtagcgtccaactggccgaccattaccagcagaacaccccaattggtgacggtccggttttgctgccggataatcactatctgagcacccaaagcgtgctgagcaaagatccgaacgaaaaacgtgatcacatggtcctgctggaatttgtgaccgctgcgggcatcacccacggtatggacgagctgtataagtaatga BBa_K1149023_sequence 1 atgaaatacctgctgccgaccgctgctgctggtctgctgctcctcgctgcccagccggcgatggcc BBa_B0034_sequence 1 aaagaggagaaa BBa_S05217_sequence 1 atgaaatacctgctgccgaccgctgctgctggtctgctgctcctcgctgcccagccggcgatggccatggcaccggccgttgaacagcgttctgaagcagctcctctgattgaggcacgtggtgaaatggtagcaaacaagtacatcgtgaagttcaaggagggttctgctctgtctgctctggatgctgctatggaaaagatctctggcaagcctgatcacgtctataagaacgtgttcagcggtttcgcagcaactctggacgagaacatggtccgtgtactgcgtgctcatccagacgttgaatacatcgaacaggacgctgtggttactatcaacgcggcacagactaacgcaccttggggtctggcacgtatttcttctacttccccgggtacgtctacttactactacgacgagtctgccggtcaaggttcttgcgtttacgtgatcgatacgggcatcgaggcttctcatcctgagtttgaaggccgtgcacaaatggtgaagacctactactactcttcccgtgacggtaatggtcacggtactcattgcgcaggtactgttggtagccgtacctacggtgttgctaagaaaacgcaactgttcggcgttaaagtgctggacgacaacggttctggtcagtactccaccattatcgcgggtatggatttcgtagcgagcgataaaaacaaccgcaactgcccgaaaggtgttgtggcttctctgtctctgggtggtggttactcctcttctgttaacagcgcagctgcacgtctgcaatcttccggtgtcatggtcgcagtagcagctggtaacaataacgctgatgcacgcaactactctcctgctagcgagccttctgtttgcaccgtgggtgcatctgatcgttatgatcgtcgtagctccttcagcaactatggttccgtcctggatatcttcggccctggtacttctatcctgtctacctggattggcggtagcactcgttccatttccggtacgagcatggctactccacatgttgctggtctggcagcatacctgatgaccctgggtaagaccactgctgcatccgcttgtcgttacatcgcggatactgcgaacaaaggcgatctgtctaacatcccgttcggcaccgttaatctgctggcatacaacaactatcaggctgtcgaccatcatcatcatcatcattgaaaatcaaattaaggaggtaagataatgcgtaaaggcgaagaactgttcacgggcgtagttccgattctggtcgagctggacggcgatgtgaacggtcataagtttagcgttcgcggtgaaggtgagggcgacgcgaccaacggcaaactgaccctgaagttcatctgcaccaccggtaaactgccggtgccttggccgaccttggtgacgacgttgacgtatggcgtgcagtgttttgcgcgttatccggaccacatgaaacaacacgatttcttcaaatctgcgatgccggagggttacgtccaggagcgtaccatttccttcaaggatgatggctactacaaaactcgcgcagaggttaagtttgaaggtgacacgctggtcaatcgtatcgaattgaagggtatcgactttaaagaggatggtaacattctgggccataaactggagtataacttcaacagccataatgtttacattacggcagacaagcaaaagaacggcatcaaggccaatttcaagattcgccacaatgttgaggacggtagcgtccaactggccgaccattaccagcagaacaccccaattggtgacggtccggttttgctgccggataatcactatctgagcacccaaagcgtgctgagcaaagatccgaacgaaaaacgtgatcacatggtcctgctggaatttgtgaccgctgcgggcatcacccacggtatggacgagctgtataagtaatga BBa_K1149035_sequence 1 atggcaccggccgttgaacagcgttctgaagcagctcctctgattgaggcacgtggtgaaatggtagcaaacaagtacatcgtgaagttcaaggagggttctgctctgtctgctctggatgctgctatggaaaagatctctggcaagcctgatcacgtctataagaacgtgttcagcggtttcgcagcaactctggacgagaacatggtccgtgtactgcgtgctcatccagacgttgaatacatcgaacaggacgctgtggttactatcaacgcggcacagactaacgcaccttggggtctggcacgtatttcttctacttccccgggtacgtctacttactactacgacgagtctgccggtcaaggttcttgcgtttacgtgatcgatacgggcatcgaggcttctcatcctgagtttgaaggccgtgcacaaatggtgaagacctactactactcttcccgtgacggtaatggtcacggtactcattgcgcaggtactgttggtagccgtacctacggtgttgctaagaaaacgcaactgttcggcgttaaagtgctggacgacaacggttctggtcagtactccaccattatcgcgggtatggatttcgtagcgagcgataaaaacaaccgcaactgcccgaaaggtgttgtggcttctctgtctctgggtggtggttactcctcttctgttaacagcgcagctgcacgtctgcaatcttccggtgtcatggtcgcagtagcagctggtaacaataacgctgatgcacgcaactactctcctgctagcgagccttctgtttgcaccgtgggtgcatctgatcgttatgatcgtcgtagctccttcagcaactatggttccgtcctggatatcttcggccctggtacttctatcctgtctacctggattggcggtagcactcgttccatttccggtacgagcatggctactccacatgttgctggtctggcagcatacctgatgaccctgggtaagaccactgctgcatccgcttgtcgttacatcgcggatactgcgaacaaaggcgatctgtctaacatcccgttcggcaccgttaatctgctggcatacaacaactatcaggctgtcgaccatcatcatcatcatcattga BBa_K206000_sequence 1 acattgattatttgcacggcgtcacactttgctatgccatagcaagatagtccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccataccgtttttttgggctagc BBa_K1149008_sequence 1 acattgattatttgcacggcgtcacactttgctatgccatagcaagatagtccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccataccgtttttttgggctagctactagagaaagaggagaaatactagatgaaatacctgctgccgaccgctgctgctggtctgctgctcctcgctgcccagccggcgatggccatggcaccggccgttgaacagcgttctgaagcagctcctctgattgaggcacgtggtgaaatggtagcaaacaagtacatcgtgaagttcaaggagggttctgctctgtctgctctggatgctgctatggaaaagatctctggcaagcctgatcacgtctataagaacgtgttcagcggtttcgcagcaactctggacgagaacatggtccgtgtactgcgtgctcatccagacgttgaatacatcgaacaggacgctgtggttactatcaacgcggcacagactaacgcaccttggggtctggcacgtatttcttctacttccccgggtacgtctacttactactacgacgagtctgccggtcaaggttcttgcgtttacgtgatcgatacgggcatcgaggcttctcatcctgagtttgaaggccgtgcacaaatggtgaagacctactactactcttcccgtgacggtaatggtcacggtactcattgcgcaggtactgttggtagccgtacctacggtgttgctaagaaaacgcaactgttcggcgttaaagtgctggacgacaacggttctggtcagtactccaccattatcgcgggtatggatttcgtagcgagcgataaaaacaaccgcaactgcccgaaaggtgttgtggcttctctgtctctgggtggtggttactcctcttctgttaacagcgcagctgcacgtctgcaatcttccggtgtcatggtcgcagtagcagctggtaacaataacgctgatgcacgcaactactctcctgctagcgagccttctgtttgcaccgtgggtgcatctgatcgttatgatcgtcgtagctccttcagcaactatggttccgtcctggatatcttcggccctggtacttctatcctgtctacctggattggcggtagcactcgttccatttccggtacgagcatggctactccacatgttgctggtctggcagcatacctgatgaccctgggtaagaccactgctgcatccgcttgtcgttacatcgcggatactgcgaacaaaggcgatctgtctaacatcccgttcggcaccgttaatctgctggcatacaacaactatcaggctgtcgaccatcatcatcatcatcattgaaaatcaaattaaggaggtaagataatgcgtaaaggcgaagaactgttcacgggcgtagttccgattctggtcgagctggacggcgatgtgaacggtcataagtttagcgttcgcggtgaaggtgagggcgacgcgaccaacggcaaactgaccctgaagttcatctgcaccaccggtaaactgccggtgccttggccgaccttggtgacgacgttgacgtatggcgtgcagtgttttgcgcgttatccggaccacatgaaacaacacgatttcttcaaatctgcgatgccggagggttacgtccaggagcgtaccatttccttcaaggatgatggctactacaaaactcgcgcagaggttaagtttgaaggtgacacgctggtcaatcgtatcgaattgaagggtatcgactttaaagaggatggtaacattctgggccataaactggagtataacttcaacagccataatgtttacattacggcagacaagcaaaagaacggcatcaaggccaatttcaagattcgccacaatgttgaggacggtagcgtccaactggccgaccattaccagcagaacaccccaattggtgacggtccggttttgctgccggataatcactatctgagcacccaaagcgtgctgagcaaagatccgaacgaaaaacgtgatcacatggtcctgctggaatttgtgaccgctgcgggcatcacccacggtatggacgagctgtataagtaatga igem2sbol 1 iGEM to SBOL conversion Conversion of the iGEM parts registry to SBOL2.1 Chris J. Myers James Alastair McLaughlin 2017-03-06T15:00:00.000Z