BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_J23104
1
BBa_J23104
constitutive promoter family member
2006-08-03T11:00:00Z
2015-08-31T04:08:40Z
isolated from library of promoters
replace later
false
false
_52_
0
483
95
In stock
true
N/A
true
John Anderson
BBa_K608002
1
BBa_K608002
strong Promoter and strong RBS
2011-09-14T11:00:00Z
2015-05-08T01:12:52Z
assembly from iGEM parts
Released HQ 2013
you can insert your part behind this part so it will be immediatly expressed in e.coli.
false
false
_780_
0
9115
9
In stock
false
cloning via 3a-assembly
false
Julia M??ller
component2128648
1
BBa_B0034
component2128646
1
BBa_J23104
annotation2128646
1
BBa_J23104
range2128646
1
1
35
annotation2128648
1
BBa_B0034
range2128648
1
44
55
BBa_K1172306
1
BBa_K1172306
Riboflavin synthesis gene cluster from s. oneidensis under control of a strong Anderson promoter
2013-09-18T11:00:00Z
2015-05-08T01:09:34Z
false
false
_1485_
0
17241
9
It's complicated
false
false
Thorben Meyer
component2355312
1
BBa_K1172303
component2355311
1
BBa_K608002
annotation2355311
1
BBa_K608002
range2355311
1
1
55
annotation2355312
1
BBa_K1172303
range2355312
1
62
3658
BBa_K1172303
1
rib-synth
Riboflavin synthesis gene cluster from shewanella oneidensis
2013-09-18T11:00:00Z
2015-05-08T01:09:34Z
genome of shewanella oneidensis MR-1
This gene cluster consists of four different genes that form a single operon.
false
false
_1485_
0
17241
9
In stock
true
we eliminated three illegal restriction sites.
false
Thorben Meyer
annotation2370721
1
tga
range2370721
1
1144
1146
annotation2370723
1
taa
range2370723
1
2978
2980
annotation2370310
1
ribD
range2370310
1
1
1146
annotation2370724
1
taa
range2370724
1
3595
3597
annotation2370717
1
atg
range2370717
1
1
3
annotation2370722
1
tag
range2370722
1
1808
1810
annotation2370313
1
ribE
range2370313
1
3121
3597
annotation2370719
1
atg
range2370719
1
1877
1879
annotation2370718
1
atg
range2370718
1
1154
1156
annotation2370720
1
atg
range2370720
1
3121
3123
annotation2370714
1
Pst1 C->T
range2370714
1
234
239
annotation2370312
1
ribBA
range2370312
1
1877
2980
annotation2370311
1
SO_3468
range2370311
1
1154
1810
annotation2370716
1
EcoR1 C->T
range2370716
1
1840
1845
annotation2370715
1
Pst1 C->T
range2370715
1
1644
1649
BBa_K1172303_sequence
1
atgaattggtcagtactcgataaccaaatgatgagccgagctattcaattggctcgcaaaggattttataccactcgccccaatcccagtgtgggctgcgttatcgttaacgataaccagattgtcggtgaaggttatcatcaaaaagccggagagccccacgctgaagtgcatgcgctgcgcatggctggcgagcttgcccgtggcgcgactgcttatgtcaccttagaaccctgtagccattatggtcgtacgccgccctgcgccttggcgctgatcaatattggtgtaaagcgggtggtggtggcggttgaagatcctaatccgcaggtcggcgggcgcggtattcaaatgctgcgcgatgcgggtattcaagtggatgtgggcttgcatcgtgatgaggcctatgccttaaatcttggttttatgaagcgcatggagtcgggtctaccttgggtgacggtaaagcttgccgcgagtcttgatggtaaaactgcgttatcaaacggggtgtctaaatggatcactggccctgaagctcgccgcgatgtgcagcgcttaagattacgatcctgcgcgctgatcacggggattgaaacggtactggccgatgatccatcgctcaatgtgcgctactcagagcttggcagtttaagagcgcaattgagtgagtcgcaggttttacagccgctgcgagtggttttggacagtcgcgcccgcatgcctatcacggcagcattgtttgcgattgaatcacccattttattagtctcgacagtgagctattcgtcagactttatggtgcaattacccgcccatgtgacttgcctccaattaccagccattgagggtcgaatctccttgtctgcactattaagctatttaggcaaaagctgtaatcaggtgcttatcgaagcgggcgcgactttagctggcgcctttatcggctcaggattagccgatgaattagtgctttatcaagcgatgaaaatccttggcggccaaggacgtaatctacttgaattacccgattatcaaatgatggccgatattccgaccctcaaattggtcgacgagcgtaaagtgggcgcggatacgcgcttcaccttgaggctcgagtccaatccatctttagcgaataagtgagttaaccatgtttactgggattattgaggccgttggtacactgcgaaagcttgagcgtaaaggcgatgatattcgcttaacggtcgccagtggcaaactggatttaaccgatgtgcgtttaggcgacagtatcgccaccaacggtgtatgtttgaccgtggttcaacagttagccgatggctatgtggctgatgtgtcagctgaaaccgtcagccttacaggttttgcaaactataaagtgggtactaaggtcaatcttgaaaaggccgtcaccccaactactcgtttaggcggccatatggtgagtggtcatgtggatgggattgctactgttgagcagcgtcttgctcgtggtcaagcaatcgaattttggttagcggctcccacggagcttgctcgctatattgcccataaaggttctatcacgattgatggcgtgagcctgacagtaaacgaagtcgatggacaccgttttcgattaacgattgtgccccatactgtaggtgaaaccacgttggtggatttaaaagcaggcgataaggtcaatattgaagtggacttaattgcccgttatttagagcgtttaatgcgttttgacagcaaagaaacccaaggcggaggggtgaccatggaaatgttagcccgtgctggctttgtgcgttagtacactggcactcagttcacttaggtatagaatttataacaacagtcacattataaaggtcctacaatggcgctgcacagtatagaagagatcatcgaggatattcgtcaaggcaaaatggttattttgatggatgacgaggacagagaaaacgaaggcgatctgattttggcggccgaaatggtgacgccagaagcgattaactttatggcgaaatacggccgcgggttaatctgccaaacgatgaccaaggcccgttgccagcagttaaatctgcccttgatggtaaccaataacaatgcgcagttctcgaccaactttacggtatcgattgaagctgccgaaggcgtaaccacagggatttcggcccacgatcgcgctgtaaccgttaaagcggccgtagcaaaagatgctaaagcgtcggacttagttcagcctgggcatatcttcccgttaatggcgcaggatggtggcgtattaacccgcgcaggtcacactgaagcgggctgtgatttagcccgtttagcagggcttgaaccatcgggggtgattgttgaaattttgaacgaagacggcactatggcccgtcgcccagatttagagattttctctgaaaaacatggcattaaaatcggcactattgcggccctgattgaataccgtaataccaaagaaacgaccgttgtgcgtgaagccaaatgcaaactgccaacccgtttcggtgagttcgatatggtgacctttagggatactatcgacaatcaattgcactttgccttagtgaaaggcgaggtgaagcctgactgtttagtacgggtacatttacagaatacctttaacgatctacttcactctgagcgtgatcagcaacgtagctggccgctcgaaaaagcgatggcgcggatttctgccgaaggtggtgtattagtactgcttggcaatcaggaacattccagtgaaatcctcgccaaagtcaaagcctttgaagcggaagatcaaggtcagaccccagtatcggctaaatggcaaggcacctcacgccgtgtaggtgtgggttcgcaaatcctcgccagtttaggcgtgacaaaaatgcgactcttaagctcgcccaaacgttatcactcactttcaggctttggccttgaagtgaccgaatgcgtagctgagtaacaggttaagcttgtaataggttgcactaaggtaaaattaaccatttctatcatttgcataaggccgcgggcaattgactgtggtatcatgtcgccacttttcgcccagagctgggtgctttagctaaattaggtaagaaaatgaacgtagttcaaggtaatatcgaagcgaagaatgccaaagttgcgattgtaatttcgcgttttaacagctttttagtcgaaagcctgcttgaaggtgcacttgacacgctgaaacgttttggccaagtcagtgatgaaaacatcactgttgtccgtgtacctggtgcggttgagttaccgctggctgcacgtcgtgttgccgcaagtggtaagtttgacggtattattgcacttggtgcggtaatccgtggtggtacccctcactttgattttgttgcaggcgaatgtaacaaaggtctggctcaaattgcattagagttcgatctgcccgttgctttcggtgtattgactacagataccattgaacaagctattgagcgttcaggtactaaagcgggtaacaaaggcggcgaagctgctctaagcttgcttgaaatggtcaacgttctgcaacagcttgaacaacagttgtaa
BBa_K1172306_sequence
1
ttgacagctagctcagtcctaggtattgtgctagctactagagaaagaggagaaatactagatgaattggtcagtactcgataaccaaatgatgagccgagctattcaattggctcgcaaaggattttataccactcgccccaatcccagtgtgggctgcgttatcgttaacgataaccagattgtcggtgaaggttatcatcaaaaagccggagagccccacgctgaagtgcatgcgctgcgcatggctggcgagcttgcccgtggcgcgactgcttatgtcaccttagaaccctgtagccattatggtcgtacgccgccctgcgccttggcgctgatcaatattggtgtaaagcgggtggtggtggcggttgaagatcctaatccgcaggtcggcgggcgcggtattcaaatgctgcgcgatgcgggtattcaagtggatgtgggcttgcatcgtgatgaggcctatgccttaaatcttggttttatgaagcgcatggagtcgggtctaccttgggtgacggtaaagcttgccgcgagtcttgatggtaaaactgcgttatcaaacggggtgtctaaatggatcactggccctgaagctcgccgcgatgtgcagcgcttaagattacgatcctgcgcgctgatcacggggattgaaacggtactggccgatgatccatcgctcaatgtgcgctactcagagcttggcagtttaagagcgcaattgagtgagtcgcaggttttacagccgctgcgagtggttttggacagtcgcgcccgcatgcctatcacggcagcattgtttgcgattgaatcacccattttattagtctcgacagtgagctattcgtcagactttatggtgcaattacccgcccatgtgacttgcctccaattaccagccattgagggtcgaatctccttgtctgcactattaagctatttaggcaaaagctgtaatcaggtgcttatcgaagcgggcgcgactttagctggcgcctttatcggctcaggattagccgatgaattagtgctttatcaagcgatgaaaatccttggcggccaaggacgtaatctacttgaattacccgattatcaaatgatggccgatattccgaccctcaaattggtcgacgagcgtaaagtgggcgcggatacgcgcttcaccttgaggctcgagtccaatccatctttagcgaataagtgagttaaccatgtttactgggattattgaggccgttggtacactgcgaaagcttgagcgtaaaggcgatgatattcgcttaacggtcgccagtggcaaactggatttaaccgatgtgcgtttaggcgacagtatcgccaccaacggtgtatgtttgaccgtggttcaacagttagccgatggctatgtggctgatgtgtcagctgaaaccgtcagccttacaggttttgcaaactataaagtgggtactaaggtcaatcttgaaaaggccgtcaccccaactactcgtttaggcggccatatggtgagtggtcatgtggatgggattgctactgttgagcagcgtcttgctcgtggtcaagcaatcgaattttggttagcggctcccacggagcttgctcgctatattgcccataaaggttctatcacgattgatggcgtgagcctgacagtaaacgaagtcgatggacaccgttttcgattaacgattgtgccccatactgtaggtgaaaccacgttggtggatttaaaagcaggcgataaggtcaatattgaagtggacttaattgcccgttatttagagcgtttaatgcgttttgacagcaaagaaacccaaggcggaggggtgaccatggaaatgttagcccgtgctggctttgtgcgttagtacactggcactcagttcacttaggtatagaatttataacaacagtcacattataaaggtcctacaatggcgctgcacagtatagaagagatcatcgaggatattcgtcaaggcaaaatggttattttgatggatgacgaggacagagaaaacgaaggcgatctgattttggcggccgaaatggtgacgccagaagcgattaactttatggcgaaatacggccgcgggttaatctgccaaacgatgaccaaggcccgttgccagcagttaaatctgcccttgatggtaaccaataacaatgcgcagttctcgaccaactttacggtatcgattgaagctgccgaaggcgtaaccacagggatttcggcccacgatcgcgctgtaaccgttaaagcggccgtagcaaaagatgctaaagcgtcggacttagttcagcctgggcatatcttcccgttaatggcgcaggatggtggcgtattaacccgcgcaggtcacactgaagcgggctgtgatttagcccgtttagcagggcttgaaccatcgggggtgattgttgaaattttgaacgaagacggcactatggcccgtcgcccagatttagagattttctctgaaaaacatggcattaaaatcggcactattgcggccctgattgaataccgtaataccaaagaaacgaccgttgtgcgtgaagccaaatgcaaactgccaacccgtttcggtgagttcgatatggtgacctttagggatactatcgacaatcaattgcactttgccttagtgaaaggcgaggtgaagcctgactgtttagtacgggtacatttacagaatacctttaacgatctacttcactctgagcgtgatcagcaacgtagctggccgctcgaaaaagcgatggcgcggatttctgccgaaggtggtgtattagtactgcttggcaatcaggaacattccagtgaaatcctcgccaaagtcaaagcctttgaagcggaagatcaaggtcagaccccagtatcggctaaatggcaaggcacctcacgccgtgtaggtgtgggttcgcaaatcctcgccagtttaggcgtgacaaaaatgcgactcttaagctcgcccaaacgttatcactcactttcaggctttggccttgaagtgaccgaatgcgtagctgagtaacaggttaagcttgtaataggttgcactaaggtaaaattaaccatttctatcatttgcataaggccgcgggcaattgactgtggtatcatgtcgccacttttcgcccagagctgggtgctttagctaaattaggtaagaaaatgaacgtagttcaaggtaatatcgaagcgaagaatgccaaagttgcgattgtaatttcgcgttttaacagctttttagtcgaaagcctgcttgaaggtgcacttgacacgctgaaacgttttggccaagtcagtgatgaaaacatcactgttgtccgtgtacctggtgcggttgagttaccgctggctgcacgtcgtgttgccgcaagtggtaagtttgacggtattattgcacttggtgcggtaatccgtggtggtacccctcactttgattttgttgcaggcgaatgtaacaaaggtctggctcaaattgcattagagttcgatctgcccgttgctttcggtgtattgactacagataccattgaacaagctattgagcgttcaggtactaaagcgggtaacaaaggcggcgaagctgctctaagcttgcttgaaatggtcaacgttctgcaacagcttgaacaacagttgtaa
BBa_B0034_sequence
1
aaagaggagaaa
BBa_K608002_sequence
1
ttgacagctagctcagtcctaggtattgtgctagctactagagaaagaggagaaa
BBa_J23104_sequence
1
ttgacagctagctcagtcctaggtattgtgctagc
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z