BBa_K1184000
1
BBa_K1184000
KillerRed
2013-09-03T11:00:00Z
2016-01-25T02:40:37Z
Engineered from avGFP. Provided by the Bruchez lab at Carnegie Mellon
KillerRed is a red fluorescent protein that produces reactive oxygen species (ROS) in the presence of yellow-orange light (540-585 nm). KillerRed is engineered from Aequorea victoria GFP (avGFP) to be phototoxic. It has been shown that KillerRed produces superoxide radical anions by reacting with water. Superoxide reacts with the chromophore of KillerRed, causing it to become dark, which ultimately gives rise to a bleaching effect. KillerRed is spectrally similar to mRFP1 with a similar brightness. KillerRed is oligomeric and may form large aggregates.
This sequence is codon optimized for mammalian cells and has 14 rare proline codons for E. coli (CCC) and one rare arginine codon (AGA). Codon optimization should be taken into consideration if large amounts of the protein are required. Expression on a high-copy plasmid has produced detectable fluorescent signal, however.
false
false
_1497_
4206
12713
9
In stock
true
This sequence is not codon optimized for E. coli.
false
Eric Pederson
annotation2334953
1
Double Stop
range2334953
1
718
723
annotation2334960
1
Phototoxic Mutation Asn(147)
range2334960
1
439
441
annotation2334958
1
Chromophore
range2334958
1
199
207
annotation2334954
1
Start
range2334954
1
1
3
annotation2334955
1
cds
range2334955
1
1
717
annotation2334956
1
Phototoxic Mutation Glu(70)
range2334956
1
208
210
annotation2334965
1
Phototoxic Mutation Ala(163)
range2334965
1
487
489
annotation2334957
1
Phototoxic Mutation Ser(121)
range2334957
1
367
369
BBa_K1184000_sequence
1
atgggttcagagggcggccccgccctgttccagagcgacatgaccttcaaaatcttcatcgacggcgaggtgaacggccagaagttcaccatcgtggccgacggcagcagcaagttcccccacggcgacttcaacgtgcacgccgtgtgcgagaccggcaagctgcccatgagctggaagcccatctgccacctgatccagtacggcgagcccttcttcgcccgctaccccgacggcatcagccatttcgcccaggagtgcttccccgagggcctgagcatcgaccgcaccgtgcgcttcgagaacgacggcaccatgaccagccaccacacctacgagctggacgacacctgcgtggtgagccgcatcaccgtgaactgcgacggcttccagcccgacggccccatcatgcgcgaccagctggtggacatcctgcccaacgagacccacatgttcccccacggccccaacgccgtgcgccagctggccttcatcggcttcaccaccgccgacggcggcctgatgatgggccacttcgacagcaagatgaccttcaacggcagccgcgccatcgagatccccggcccacacttcgtgaccatcatcaccaagcagatgagggacaccagcgacaagcgcgaccacgtgtgccagcgcgaggtggcctacgcccacagcgtgccccgcatcaccagcgccatcggtagcgacgaggattaataa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z