BBa_K1196011
1
BBa_K1196011
Hydrazine synthetase
2013-09-09T11:00:00Z
2015-05-08T01:09:38Z
Reference:
Han P., Klumper U., Wong A.C.F., Li M., Lin J.G., Quan Z.X., Ford T., Gu J.D.
Submitted (26-MAR-2012) to the INSDC.
School of Biological Sciences, The University of Hong Kong, Kadoorie Biological
Sciences Building, Hong Kong, China
The genomic sequence of this part comes from uncultured anaerobic ammonium-oxidizing bacterium.
Hydrazine synthetase, a unique phylomarker with which to study the presence and biodiversity of anammox bacteria.The tested hydrazine synthetase were able to retrieve hzsA gene sequences from anammox enrichment cultures, full-scale anammox wastewater treatment systems, and a variety of freshwater and marine environmental samples, covering all known anammox genera.
false
false
_1510_
0
18793
9
Not in stock
false
Hydrazine synthetase, a unique phylomarker with which to study the presence and biodiversity of anammox bacteria.The tested hydrazine synthetase were able to retrieve hzsA gene sequences from anammox enrichment cultures, full-scale anammox wastewater treatment systems, and a variety of freshwater and marine environmental samples, covering all known anammox genera.
false
Chao Sun
BBa_K1196019
1
BBa_K1196019
hydrazine synthetase device
2013-09-15T11:00:00Z
2015-05-08T01:09:39Z
anammox
This part can synthesize hydrazine synthetase.
false
false
_1510_
0
18361
9
Not in stock
false
This part can synthesize hydrazine synthetase.
false
Sheng Ding
component2346850
1
BBa_J23100
component2346855
1
BBa_B0010
component2346852
1
BBa_B0030
component2346857
1
BBa_B0012
component2346854
1
BBa_K1196011
annotation2346855
1
BBa_B0010
range2346855
1
270
349
annotation2346850
1
BBa_J23100
range2346850
1
1
35
annotation2346854
1
BBa_K1196011
range2346854
1
67
261
annotation2346852
1
BBa_B0030
range2346852
1
44
58
annotation2346857
1
BBa_B0012
range2346857
1
358
398
BBa_B0030
1
BBa_B0030
RBS.1 (strong) -- modified from R. Weiss
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
Strong RBS based on Ron Weiss thesis. Strength is considered relative to <bb_part>BBa_B0031</bb_part>, <bb_part>BBa_B0032</bb_part>, <bb_part>BBa_B0033</bb_part>.
false
true
_44_46_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix ("orig" in figure 4-14 of Ron Weiss thesis). <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation1702
1
RBS
range1702
1
8
12
annotation7025
1
BBa_B0030
range7025
1
1
15
annotation1701
1
RBS-1\Strong
range1701
1
1
15
BBa_J23100
1
BBa_J23100
constitutive promoter family member
2006-08-03T11:00:00Z
2015-08-31T04:08:40Z
Isolated from library of promoters
Released HQ 2013
Replace later
false
true
_52_
0
483
95
In stock
true
N/A
true
John Anderson
BBa_B0012
1
BBa_B0012
TE from coliphageT7
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>.
Released HQ 2013
Transcription terminator for the <i>E.coli</i> RNA polymerase.
false
false
_1_
0
24
7
In stock
false
<P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator.
false
Reshma Shetty
annotation1690
1
polya
range1690
1
28
41
annotation1686
1
T7 TE
range1686
1
8
27
annotation7020
1
BBa_B0012
range7020
1
1
41
annotation1687
1
stop
range1687
1
34
34
BBa_B0010
1
BBa_B0010
T1 from E. coli rrnB
2003-11-19T12:00:00Z
2015-08-31T04:07:20Z
Transcriptional terminator consisting of a 64 bp stem-loop.
false
false
_1_
0
24
7
In stock
false
true
Randy Rettberg
annotation4184
1
stem_loop
range4184
1
12
55
annotation7018
1
BBa_B0010
range7018
1
1
80
BBa_B0010_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc
BBa_J23100_sequence
1
ttgacggctagctcagtcctaggtacagtgctagc
BBa_K1196011_sequence
1
gggtatcagtatgtagaggatgatggttcaaccgttacctcacagttggcagacgtaccgtattacatccagattctggatgacaagggtatgtccgtacagacgggtttatcctgggcatacttaaggccgtatcatggtaggattggatgtcactatggatcatatcgtggaagggcatttaagaatttgcat
BBa_B0030_sequence
1
attaaagaggagaaa
BBa_K1196019_sequence
1
ttgacggctagctcagtcctaggtacagtgctagctactagagattaaagaggagaaatactagaggggtatcagtatgtagaggatgatggttcaaccgttacctcacagttggcagacgtaccgtattacatccagattctggatgacaagggtatgtccgtacagacgggtttatcctgggcatacttaaggccgtatcatggtaggattggatgtcactatggatcatatcgtggaagggcatttaagaatttgcattactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_B0012_sequence
1
tcacactggctcaccttcgggtgggcctttctgcgtttata
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z