BBa_K143021
1
RBS-spoVG
SpoVG ribosome binding site (RBS) for B. subtilis
2008-09-16T11:00:00Z
2015-05-08T01:10:23Z
The sequence was taken from a previous research paper [1] and was constructed by Geneart.
Released HQ 2013
Description: SpoVG is an endogenous ribosome binding site from B.subtilis. The sequence of the spoVG ribosome binding site is AAAGGUGGUGA which is complementary to the sequence UUUCCUCCACU from the 3' region of the 16s rRNA from B.subtilis. Previous research showed that the predicted binding energy of the 16s rRNA to the RBS is -19kcal <cite>1</cite>
false
true
_199_
0
2090
9
In stock
false
In order to ensure that the RBS is functional the actual ribosome binding site was maintained and the distance between the RBS and the start codon maintained. In order to conform to the biobrick standard the sequence flanking the RBS had to be changed but the distance between the promoter and RBS, and start codon and RBS was maintained.
false
James Chappell
annotation1975997
1
rbs
range1975997
1
1
12
BBa_K823002
1
BBa_K823002
P<sub>lepA</sub>
2012-07-15T11:00:00Z
2015-05-08T01:13:29Z
Bacillus subtilis
Released HQ 2013
PlepA is the promoter of the PlepA gene of Bacillus subtilis. It is a constitutive promoter and does not contain a ribosome binding site.
false
false
_1081_
0
12081
9
In stock
false
no considerations
false
Korinna Kraft
BBa_K1364017
1
BBa_K1364017
Promotor PlepA + RBS spoVG
2014-10-01T11:00:00Z
2015-06-08T09:09:06Z
http://parts.igem.org/Part:BBa_K823002
http://parts.igem.org/Part:BBa_K143021
PlepA is a constitutive promotor in Bacillus subtilis (BBa_K823002) coupled with a RBS spoVG (BBa_K143021).
To get the highest level of translation from this Promoter-RBS combination it must be connected to a coding region preceded by a coding region prefix. A standard prefix will increase the distance between the RBS and the start codon, reducing translational efficiency.
false
false
_1740_
4206
21465
9
In stock
false
The sequence has been verified by sequencing
false
Jourdan Camille
component2392214
1
BBa_K823002
component2392216
1
BBa_K143021
annotation2392216
1
BBa_K143021
range2392216
1
166
177
annotation2392214
1
BBa_K823002
range2392214
1
1
157
BBa_K143021_sequence
1
aaaggtggtgaa
BBa_K1364017_sequence
1
agtcaatgtatgaatggatacgggatatgaatcaataagtacgtgaaagagaaaagcaacccagatatgatagggaacttttctctttcttgttttacattgaatctttacaatcctattgatataatctaagctagtgtattttgcgtttaatagttactagagaaaggtggtgaa
BBa_K823002_sequence
1
agtcaatgtatgaatggatacgggatatgaatcaataagtacgtgaaagagaaaagcaacccagatatgatagggaacttttctctttcttgttttacattgaatctttacaatcctattgatataatctaagctagtgtattttgcgtttaatagt
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z