BBa_K1377001
1
BBa_K1377001
spaA backward + sortase A + spaB + spaC
2014-10-08T11:00:00Z
2015-05-08T01:10:12Z
Genomic DNA of Corynebacterium diphtheriae
Pilin A gene cluster is coding for pili A of Corynebacterium diphtheriae. It has four coding regions and one regulatory region. Regulatory region is its own promoter. Four coding regions are sortase A, enzyme that makes pili A and pilin spa A & B & C that are components of pili A . WIth these all regions, we can make pili A.
And we are going to modifying this part to generate "Our Favorite Protein Whip", especially spa A
false
false
_1754_
0
15620
9
It's complicated
false
Just include all cluster that related to make pili A
And there is no good restriction enzyme unique cut site, so we slice the cluster to two
false
Jade Minseob Yoo
BBa_K1377001_sequence
1
agtcgtcgagtttgaggcacctgtgaccaagcagccagaaaacggccagctagataaccaagcatgggtactaccgagtaaccccactgctcagtgggatccagaagaaagcggcgatgctgcgttgcgcggtatgccgtcgtcacgcgtgagttccaagttcggccagatcacgattgagaaatcctttgacggcaacaccccaggtgccgatcgcaccgcgacgttccagctgcatcgttgcgaggccgacggcagcctagtcaagtccgacccaccgatctcccttgatggcaagcaggagtttgttaccggccaagatggtaaggccgtactcagcggtatccacttgggcaccttgcagctcgagtccaatgttatgaaatataccgacgcgtgggccggcaagggaaccgaattctgcctggtagaaacagctactgccagcggatatgagctgttgcctaagccagtgatagtaaagctggaagccaacgagtctaccaacgtgttggtagaacaaaaagtaaagatcgacaacaagaaaaagaacgccggatttgaactgccactcacaggtggttcggggcgcatcgccatcactatcggcatcgttggtttgctcgtcgccctcgcaagctatgtcttatcgcgtaggaaggacaaccgctagatgaggcaccgggcaggtgaacatcgaaacgtttttgccatcctcgcattcgtcatcgcgatcgtctcagtgggatttttgctctaccccgtggccgcaaccgcatggaacaacgcgcgccaagcacgcgtcgcacagtcctacgagaacagctacgaggtagacagcccagcggtacgagacagcgttcttgaggcggccagacagtacaacacgtcggtagtaggcttcccgatcctcgatccgtggctgaacagggcgtcgaaaaacagcgggccatacctcgactacctgcaacaactcaacccgcagcgcgccgaacgtcccgtcatagcgtcgataagcatccctactatcgacgcccacctgcccatctaccacggcaccgacaccgccaccctcgagcacggactcggccacctatacggctccgcgctacccgttggcggcaccggcacccaccccgtgatcaccggacacagcggccttgccaacgccaccctctttgacaacctcgaagacgtcaaagaacacgaccccatctacatcaccgtccaaggcgaaaccctcaaatacgaagtagacgccatcaacgtagtcctacccgaagacaccaaactcctcgccccagaccccaacaaagaccaaataacactcatcacctgcaccccctacgccgtcaactcccaccgactcctcgtacgagcccaccgcgtagacctcgaccccaacgaccccaacctcacacaaaccggcaccaaaatctggcaaccctggatgctgtggaccgcagccctagcactcaccgccatcgccatcatcatcaccctcgtgcttcgcaggaagaggacaaccacccatgaaaaataacgccatcaacgccacagtgctcagcctcgcactgctcaccggaaccacacccgcacacgcacaagaagcaaacacattggtcattgacctcgaaccacctgcagcattcgccgacgaccaaccccaaggccacaacatcgacgtcaccgtagcaaaacttcacaacatcgaccccgaagaccacgaacgcatccgcgcccttcaacgcaacggcgtacccagcaccatcagcgaagaacaaccccacaccgcgcgtaccgacgccaccggcaccgccaccatcaccaacctgccaccagggacctacgtaatccgcgacaccaacaccacgaagccgcgctttagcccccttgtgatcccactcggtatcgacacaaccagccccaccatgaccctgcgccccaagcttatcgacgccacccccggtgcaccgaacgtgcctagcgtacctagtccgccgagcgtgacttctccggctccgaaaaagacaccaccgcgactggccttcaccggcgcaagcatcctcggactgctggccatcgccaccatcagcaccctcatcggaatcgcactactacgcactcgacgtgcagaaaagaaaggataagacgtgagtaacctacgcaccatcaagaaacgagcgtctatccccgcagcactcgtcgccatcctcgcaatggtcatgagcattgttcttgtgccgttaattgcagcgccatcagcgaatgcggagccactgccgaaaaaagagtttgaaacctgtggcggttctgttgcgatttcctttgacttgtccaattccctgagcgcttcggacgtggaaaaatctaagcaagcagcgttggagctggtcaagagcttgaaaggatctccctatcgttttggtatttatacctttgcttcacactcgcctgctgctggaaacaaaaatttcacgccagtaagtcttgctaatgatgacggatacaacaaagttgttgccgctatcaatgacatccagatgccagcgatccgagagaacaaaaagggttctcccaacggtggtaccaactgggagggcgggctccaagcaatcgcgaatgacatagacagaggcatcaagtatgacgccgtttacttcatcactgatggtcaaccaacttgggataacaatgggagaaattggttgggaaccaccaccgaggttgtggaattagaaaatgccgttacccaagccaaacttatttctgataaaggcgcaaaacttattccggtgggtattggccagctttctgatgataagccgtttgatctctataaaccgattcttccttccgaagacgattactattggtcgcgttatccatggaaaatagatcgttccctgaccggcaaacaaatgctggagaagataacctcaccgggcctagagccaattattttgcccgactattccacattgccgcagcgaatgggacaacagatttttaccggatgtttccaaatcgctaaaaacattattgatgcagacggaaacgtgatagaaaatccagctggctggaatttcgatattacagcggctggtgtgcaaggcattcctccgtcgatcgagacagataaaaatggccaagacacctttgctatgaagtcgattaataaggaatcctttaagatcactatcactgagcgacctaccggagatcaaaaacaaaacttccggtttaaaaacgcacgctgccagcgctactcctatgggcaagcacctactgatattccgatcaaaactagcgatacttcaattactttgactgcagacaccaaaagcttgatttcttgcggttttaacaatctgccagttgtaccagtctcggtttcgaaaaaagtaaacgtaaatacgccacaacttttagaagagctcaacaatcaaacctttgatttcacctatagctgtgaaaaaggagctaatgaaaaagaaatcaagggagaaattaagggcgtccacaacggagaatccaaagaaatcggaaaagttgctgttggaactcagtgcgaaatcaaggaagttacccccaaagtcgacgattctcggatgaagctttccaccacttggagcagtgaaaacaccactgcagatgctaatcaggataacggtacataccgctttaaagccgacaccgatgcgtttaaaaacaagaaaacagttctagctacagcagaaaataactatgaggctcaaacagccactattaagctgaccaagaccatcattaaccgtgacaaaattccagcaacaaaactgcccgagaagtttcctgtcacttacacctgtcgttacgtaccacatcctaatgctcgccccgaacatggtgggctcccagaaaccaatccgtattttgtagactctaaaaccgttgtcgttcctcgtgatggaagtatagaaatcggaccttttccagtgggaacacagtgcagttttgaagaaactgcacgactcgatccgaatgttcaagcagacgctaaaattcctggttttagtttgaaaactgagtggaattccaacatctgttttggaaacactatcgataataattctcaagattgttctactaactcagtatggattcccaaaccaggtcaatattcgctcaacgtagaaaatacatacacgcgtgagcttgcgagcgtggagatcgaaaagacggtgagcggcgatgcctctgatctcacgaattcacacgagttttcattcaatcttcgatgtgaagattccggagtagaagtctattcgcaagacaatatcgtggtgaagaaggacggacggcaagtcatcgaaaacattcctgtcgatgccaattgtacgttgagcgaaaaacagcctgaacaaaaaggcgtggattttgtggtccccgcgccgttccatcttcgtgcttcaactgccggcgacattgtcaaagtggttgtagataacaccgcaaaacgtcaggtagctcctatttcaatacagaaaaaagttcataaaaaagacacattttctcctgaaatttctgcatcaatcgatgcattaacatacagtgtggtggcagaatgtacggttcctggtgtagaaacgcctcgaaaagttctaaaaacagtaagtgataatcaaactgttgaatttggaaactttccagtgggaactacttgtagctttagcgagctcaccgaagcccctgccggaaccgaaatgagttataaattcgcggatggtccagaggtgacaattgaggactccactcctataaataaggtgctgacgaatacgtttgaaaatgcacgtggcgagctaaaagtaaccaaaaaagtactcgatggtgatatgcctcaagcattagtagaccagattccatcgagttttacagtcaacgtcgcatgctcaatcaccggtaatcattccatcactttgcaaaaagatgagcagaaagccgtacctggggttgttgcaggtgaaagctgcacattaagtgaggaagtaactcctataactggggctacccatcacaagcactggattaaaggcgagctgcttgaagttgcagattctacggacatcacgattaaccctaatggtagtaacgcaattcgattggaaaaccattacgaaaccgatgctgtatctttggaacttaccaaacgtgttcgggtcattgaccaagttggaaatgacgttaactcggaactaaaaaatgcagttgtccgtccagaacaacccttcctattccgataccgttgtgaaatcaatggtcaagtagttgcagaaaataccttaagcgccgatgcgattaacactggtgccactaaggtgccacggggatctatttgtacggttgaagaagattcctcttcagtggagttgtctaatgcaacgttatctcacgttgagttcttcgttcacggaacaaaaacgaatgataaggcatcggtagcgataaactcggatcataaccgactagatgctactaatactttcacgttgaagactggctcatttaaccttaaaaagaaagtcgatggtgaaggagtatctaccatccatgaggatcgacgctttgaaatttcgtatcgttgtaccttaggcgactggaagaaaaacggcaccattacgctgggacgttttgatagtgccgaatcgcattctgttaaagacattcccgtgggtgcatcatgtgagattattgaggactctgagaaagcccaagagccaaacgcacaagtgacagctcgttggactcatacagacagcacgaatggctggggcgataccgaagcagcatgcgaaaatcatgcagcgtgcgaagtggatccaaaaaatgagtttgcaaccacagtggttattgctggaaatgagaaagagaatttccaaggaacctttatcgtatggaacacctacacttacgataaaacaaaggtagagatcaacaaggtgttgacgaatgatggtccagaacttgctggtaaagataactttgccttcaccttgaaatgtactgatcctcgttttgcaggaagtgatttggcagataagcattccattccagaccccacaattacagttgcattaaatgctaaaggccaaagccgagcgtcgtaccaagttgcagacgaacggcacgatagcgttgaggttcctgttgggtataactgcactgtgaccgaaaacccgattgcactttatgatgccaaagcgacgacccaattcagtggtccggcagtggtggaaaatacggctgtgcaacgcacatcatcaaactccgcctcggctcgttttgtcacggagaaacaagaaaataatggcactcaaaaaattcaggtaactaatgattacattcgtccgcgcgccgatgtcatggtgcataagacaatcgcaaaaccagaacactcggtagatccttggttgcttaacactacatacagcatcacttataagtgcgacgatccatacatcaaggatcgttcctattcaaacgacgtagatatacaagctgatgcagaaaaaccaacgccaattttcgctgatcctacggctcacgtaaaaattcctgcgtcggcagtatgtactttcagtgaaaacaccgaagggcatttaccaggagaggtaaaaggcgtagtggatgaaacgaataaagttgctgaattcgctggggaacatgaaaagcgctcctatttcaccccagaaattaaagatgttgttttgtcggaatctgaaccaacacgaattgaattcaccaattcatacgtgatgcctcaacgaattttgagcctacaaaaatatgttgagggcgaccccggccatgctgtgattgctccagaagaaacatttgaattctcctacacctgcaccatgccgcatctattcccaaatcaacccaatcctatgtcgcaagaagtaggaaacaaggttgcacgtggcgtcattaagattcgagaaggtgagacatggcgatctcctgaagtccctattggtacgtcctgcacgatcaaggaagaagacgaccccgccttgcgcaccaagttggaaaacaatgcgctgcgcatggtgcctacctacttgttccccacggagcgtgcaggagctgctagtgcgccagtgattccgccgttgacagaccgtccgatttataacggcacggagcctcgcctccagatgccagaatcaggcattgagcttaacgacgcccactcgcacaccgtggtgatcaacaacgtgtacaccactgacgctgagatcaacattgccaaggtgaacgccgataactctccgctgcccggcgcgcacttcgccatctatgggataggggagaatggccagcgtaaagagttgcctgaggttgcggatgcgccggcgaagtcggcgaagtcggtggagcaggcgttgtttgcagtgcgcttgcgccctggtagttacgagttggtggagactcaggctcctcagggtgggcagttgctgcctaagccgtggcgttttgatgtcaaggctgcgaatgcgggtgcgataggtgatcttgaggtgaccttggataactatgatgctgattcggggttgatcacggtggagcacccgcagggtaagccgtggttgatcaaggtggctaatgtgtcggcatccacactgccgttgactggttcgaatggttacttgcggtggctgttggccggtgctgcgggcctgttggtggctgcagcattgtggttagtggcgcgtcgtaagcgttag
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z