BBa_K1427001
1
BBa_K1427001
merRNA, c-di-GMP aptamer with promoter and terminators
2014-10-16T11:00:00Z
2015-05-08T01:10:23Z
Bdellovibrio bacteriovorus
This part contains BBa_K1427001 under the transcriptional control of a constitutive T7 promoter. Additionally, terminators developed by the Voigt Lab flank the merRNA sequence. There is an upstream ECK120033737 terminator which stops read-through by other genes. Downstream of the merRNA sequence, bidirectional termination is ensured with ECK120029600 and ECK120033736. It is likely these are redundant, as the poly-U tail of the merRNA suggests that is contains an intrinsic terminator.
false
false
_1805_
0
23756
9
In stock
false
The T7 promoter initiates transcription 2 nucleotides (GG) upstream of the actual merRNA sequence. Predictive RNA folding programs did not report any change in secondary structure with this small 5' addition.
false
Connor McBrine
annotation2427491
1
ECK120029600
range2427491
1
522
611
annotation2427494
1
ECK120033736
range2427494
1
612
664
annotation2427466
1
T7 promoter
range2427466
1
58
76
annotation2427464
1
ECK120033737
range2427464
1
1
57
annotation2427463
1
merRNA
range2427463
1
77
521
BBa_K1427001_sequence
1
ggaaacacagaaaaaagcccgcacctgacagtgcgggctttttttttcgaccaaaggtaatacgactcactataggcaaggctcgggagacttacctcgggtaagtgaacgctagtagggccaagcgaaggaggacacggatgagaacacatgaacatcacgatgacgaactgaagtgaagatgcgtcaccaggattactacaaagaggttgggttcatgcctctctaaagaagaatggactggttggatctgatgaataactcataaggaggttcctagggttatactcgttaggatatagatccttcctttgcctcaaggcaaaccgtcggaaacggcgggacgcaaagctaaaggggtgtcggtgcaaagccacgccagccagctgccaaaggtcatgagtcacctgaggaatcagaggtgtgcatatggaaggaacaaatacatacaaggattggtttcattccccttagctagcgagttatcactgacgattcctcgctagcactttttttggcgattcagccaaaaaacttaagaccgccggtcttgtccactaccttgcagtaatgcggtggacaggatcggcggttttcttttctcttctcaagcgcaataaaaaagcccccggaaggtgatcttccgggggctttctcatgcgtt
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z