BBa_K1476000
1
BBa_K1476000
PilT1 knockout for Synechocystis sp. PCC 6803
2014-10-08T11:00:00Z
2015-05-08T01:10:40Z
Organism: Cyanobacteria
Genus and Strain: Synechocystis sp. PCC 6803
Source: http://genome.microbedb.jp/cyanobase/Synechocystis/genes/slr0161
Important genotype features: none
This part deletes the pilT1 ATPase gene in Synechocystis sp. PCC 6803. PilT1 normally allows for pilus retraction.
false
false
_1856_
0
21891
9
It's complicated
false
The part is designed to contained regions homologous to the pilT1 gene. As such we had to ensure that the homologous region was of sufficient length to allow for recombination. The part contains two regions homologous to pilT1: the first region is homologous to the first 200 bases of pilT1, the second region to the last 200 bases of the pilT1 gene. The centre of the part is a kanamycin resistance gene, which becomes inserted in the middle of the chromosomal pilT1 gene during recombination.
false
Matthew Smith
annotation2407302
1
pilT1 right
range2407302
1
1126
1374
annotation2407300
1
pilT1 left
range2407300
1
1
249
annotation2407304
1
KanR
range2407304
1
280
1095
BBa_K1476000_sequence
1
atggctttggaatacatgatcgaagacctcatggagcagttggtggaaatgggcggctccgatatgcacattcaagcgggggcaccggtttatttccgggtgagcggcaaattagaaccgattaacgaggaagttttaactccccaggaaagccaaaagttaatcttcagcatgctgaacaattcccaacggaaagaactagaacaaaattgggaattggactgttcctatggcgtgaaaggtttagcttgagatgctcgtaccgtgattcatgcggcaatgagccatattcaacgggaaacgtcttgctcgaggccgcgattaaattccaacatggatgctgatttatatgggtataaatgggctcgcgataatgtcgggcaatcaggtgcgacaatctatcgattgtatgggaagcccgatgcgccagagttgtttctgaaacatggcaaaggtagcgttgccaatgatgttacagatgagatggtcagactaaactggctgacggaatttatgcctcttccgaccatcaagcattttatccgtactcctgatgatgcatggttactcaccactgcgatccccgggaaaacagcattccaggtattagaagaatatcctgattcaggtgaaaatattgttgatgcgctggcagtgttcctgcgccggttgcattcgattcctgtttgtaattgtccttttaacagcgatcgcgtatttcgtctcgctcaggcgcaatcacgaatgaataacggtttggttgatgcgagtgattttgatgacgagcgtaatggctggcctgttgaacaagtctggaaagaaatgcataagcttttgccattctcaccggattcagtcgtcactcatggtgatttctcacttgataaccttatttttgacgaggggaaattaataggttgtattgatgttggacgagtcggaatcgcagaccgataccaggatcttgccatcctatggaactgcctcggtgagttttctccttcattacagaaacggctttttcaaaaatatggtattgataatcctgatatgaataaattgcagtttcatttgatgctcgatgagtttttctaaaagtagggatagtcccaaacctcacttaccgtgcaggaaattatggtcattaccccggcgatcgccaacctaattcgggaaggcaaagcggcccagatttattccgccattcaaaccggagcaaaactaggtatgcagaccatggaacagggcctggccacgttggtggtgtcgggggtaatttccctggaagaaggtttagctaagagtggtaagccggacgagctacagcgcttaatcggtggcatgaccccccaggttgccgctaaacgtcgttag
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z