BBa_K1476001
1
BBa_K1476001
PilA1 from Synechocystis sp. PCC 6803
2014-10-08T11:00:00Z
2015-05-08T01:10:40Z
Organism: Cyanobacteria
Genus and Strain: Synechocystis sp. PCC 6803
Source: http://genome.microbedb.jp/cyanobase/Synechocystis/genes/sll1694
Important genotype features: none
This part inserts the pilA1 gene into Synechocystis sp. PCC 6803. The part contains the pilA1 gene and the upstream Pcpc560 super-strong promoter.
PilA1 is the main pilus subunit.
false
false
_1856_
0
21891
9
It's complicated
false
The part is designed to contained regions homologous to the pilA1 gene. As such we had to ensure that the homologous region was of sufficient length to allow for recombination. The part contains two regions homologous to pilA1: the first region is homologous to the first 200 bases of pilA1, the second region to the last 200 bases of the pilT1 gene. The centre of the part contains the Pcpc560 super-strong promoter, the PilA1 gene and a kanamycin resistance gene, which become inserted in the middle of the chromosomal pilT1 gene during recombination.
false
Matthew Smith
annotation2407327
1
BioBrick scar site
range2407327
1
1099
1104
annotation2407321
1
phaAB left
range2407321
1
3
252
annotation2407323
1
PcPc560
range2407323
1
1110
1669
annotation2407326
1
phaAB right
range2407326
1
2302
2551
annotation2407322
1
KanR
range2407322
1
278
1093
annotation2407324
1
pilA1
range2407324
1
1670
2176
annotation2407325
1
TrbcL-S (terminator)
range2407325
1
2177
2276
BBa_K1476001_sequence
1
agtattgagcttgttgcaatcttcaccccggccctgggcacggggtattttattggtaaaaatccgatcctcataggcgatcgccgggggggatttgtttatttgttgtcaaagcttgaaatttccaatgccccgcttgccaaattaatccccataattgagctggaggcggagttaatggccgcccatcccaacccatggcattggaaaacaattatgcgtgatgtttttattgttgccgctaaacgaacttaatgcgttcctagccgctataattatgagccatattcaacgggaaacgtcttgctcgaggccgcgattaaattccaacatggatgctgatttatatgggtataaatgggctcgcgataatgtcgggcaatcaggtgcgacaatctatcgattgtatgggaagcccgatgcgccagagttgtttctgaaacatggcaaaggtagcgttgccaatgatgttacagatgagatggtcagactaaactggctgacggaatttatgcctcttccgaccatcaagcattttatccgtactcctgatgatgcatggttactcaccactgcgatccccgggaaaacagcattccaggtattagaagaatatcctgattcaggtgaaaatattgttgatgcgctggcagtgttcctgcgccggttgcattcgattcctgtttgtaattgtccttttaacagcgatcgcgtatttcgtctcgctcaggcgcaatcacgaatgaataacggtttggttgatgcgagtgattttgatgacgagcgtaatggctggcctgttgaacaagtctggaaagaaatgcataagcttttgccattctcaccggattcagtcgtcactcatggtgatttctcacttgataaccttatttttgacgaggggaaattaataggttgtattgatgttggacgagtcggaatcgcagaccgataccaggatcttgccatcctatggaactgcctcggtgagttttctccttcattacagaaacggctttttcaaaaatatggtattgataatcctgatatgaataaattgcagtttcatttgatgctcgatgagtttttctaagttgctactagaccacacctgtagagaagagtccctgaatatcaaaatggtgggataaaaagctcaaaaaggaaagtaggctgtggttccctaggcaacagtcttccctaccccactggaaactaaaaaaacgagaaaagttcgcaccgaacatcaattgcataattttagccctaaaacataagctgaacgaaactggttgtcttcccttcccaatccaggacaatctgagaatcccctgcaacattacttaacaaaaaagcaggaataaaattaacaagatgtaacagacataagtcccatcaccgttgtataaagttaactgtgggattgcaaaagcattcaagcctaggcgctgagctgtttgagcatcccggtggcccttgtcgctgcctccgtgtttctccctggatttatttaggtaatatctctcataaatccccgggtagttaacgaaagttaatggagatcagtaacaataactctagggtcattactttggactccctcagtttatccgggggaattgtgtttaagaaaatcccaactcataaagtcaagtaggagattaattcaatggctagtaattttaaattcaaactcctctctcaactctccaaaaaacgggcagaaggtggtttcaccttaatcgaactgctggttgttgtaattattatcggtgtattggctgctattgctctgcctaacctcttgggtcaagttggtaaagcacgggagtccgaagctaaatccactatcggtgctttgaaccgtgcccaacaaggttattttactgagaagggtacgtttgcaaccgatacggaaacgcttgaagtcccagctcctgatggtaatttctttagttttgcagttaacactgctgacaacacagaagctatccaagacgcaacggcattgaattgggaggctgacggcacccgctccatgtcaggtggaacgttttacgattcaggcacccgcgccttcagtactgttgtttgtcgggctgaagcaggtagtgaagatactcccccaaccccaggaggggctaatgattgtggtggtgctgaagtaattaaatagagcctgatttgtcttgatagctgctcctgcctttgggcaggggcttttttctgtctgccattcttgaggatggcggactctttcccttttgctctacgcccatacagaagtctaaagcagtgatctttactttcccccgtagccagtagctatgtcaccggcgaagtattacgggtaaatggggcccaccacacctaacttttgcggtactgtgcaagaatcctaattttctcctccctaattctggggagattttttttagccgtctaaatcccccgccatcaccgtggcgatcgccgttttggcattgtcctgaaattcccgcacattgactttgttgagcaggaaaatggagagaattaaccccagggcctg
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z