BBa_K1585213 1 BBa_K1585213 B0034.XPK 2015-08-24T11:00:00Z 2015-08-28T08:37:34Z Bifidobacterium adolescentis This is the translational unit for the phosphoketolase (XPK). It derives from Bifidobacterium adolescentis and is codon optimized for E. coli. false false _2002_ 19522 24505 9 false RFC10 compatible false Laura Grabowski component2439486 1 BBa_B0034 component2439488 1 BBa_K1585203 annotation2439488 1 BBa_K1585203 range2439488 1 19 2499 annotation2439486 1 BBa_B0034 range2439486 1 1 12 BBa_K1585203 1 BBa_K1585203 XPK 2015-08-24T11:00:00Z 2015-08-28T08:33:31Z Bifidobacterium adolescentis phosphoketolase from Bifidobacterium adolescentis, codon optimized for E.coli, converts Xu5p and pi to actp and g3p false false _2002_ 19522 24470 9 false codon optimized for E.coli false Carolin Gr??tering annotation2439475 1 phosphoketolase range2439475 1 1 2481 BBa_B0034 1 BBa_B0034 RBS (Elowitz 1999) -- defines RBS efficiency 2003-01-31T12:00:00Z 2015-08-31T04:07:20Z Released HQ 2013 RBS based on Elowitz repressilator. false true _1_ 0 24 7 In stock false Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS. Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a> true Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003. annotation23325 1 conserved range23325 1 5 8 BBa_B0034_sequence 1 aaagaggagaaa BBa_K1585213_sequence 1 aaagaggagaaatactagatgaccagcccggtgattggcaccccgtggaaaaaactgaacgcgccggtgagcgaagaagcgattgaaggcgtggataaatattggcgcgcggcgaactatctgagcattggccagatttatctgcgtagcaacccgctgatgaaagaaccgtttacccgcgaagatgtgaaacatcgcctggtgggccattggggcaccaccccgggcctgaactttctgattggccatattaaccgcctgattgcggatcatcagcagaacaccgtgattattatgggcccgggccatggcggcccggcgggcaccgcgcagagctatctggatggcacctataccgaatattttccgaacattaccaaagatgaagcgggcctgcaaaaattttttcgccagtttagctatccgggcggcattccgagccattatgcgccggaaaccccgggcagcattcatgaaggcggcgaactgggctatgcgctgagccatgcgtatggcgcggtgatgaacaacccgagcctgtttgttccggcgattgtgggcgatggcgaagcggaaaccggcccgctggcgaccggctggcagagcaacaaactgattaacccgcgcaccgatggcattgtgctgccgattctgcatctgaacggctataaaattgcgaacccgaccattctgagccgcattagcgatgaagaactgcatgaattttttcatggcatgggctatgaaccgtatgaatttgtggcgggctttgataacgaagatcatctgagcattcatcgccgctttgcggaactgtttgaaaccgtgtttgatgaaatttgcgatattaaagcggcggcgcagaccgatgatatgacccgcccgttttatccgatgattatttttcgcaccccgaaaggctggacctgcccgaaatttattgatggcaaaaaaaccgaaggtagctggcgcagccatcaggtgccgctggcgagcgcgcgcgataccgaagcgcattttgaagtgctgaaaaactggctggaaagctataaaccggaagaactgtttgatgaaaacggcgcggtgaaaccggaagtgaccgcgtttatgccgaccggcgaactgcgtattggcgaaaacccgaacgcgaacggtggtcgtattcgcgaagaactgaaactgccgaaactggaagattatgaagttaaagaagtggccgagtatggtcatggttggggtcaactggaagcgacccgccgcctgggcgtttatacccgcgatattattaaaaacaacccggattctttccgcatcttcggtccggatgaaaccgcctctaaccgcctgcaagcggcctatgatgtgaccaacaaacagtgggatgcgggttatctgtctgcccaggttgatgaacatatggcggtgaccggtcaggttaccgaacaactgagcgaacatcagatggaaggctttctggaaggctatctgctgaccggccgccatggcatctggtctagctatgaaagcttcgtgcatgttatcgattctatgctgaaccagcatgccaaatggctggaagcgaccgttcgcgaaattccgtggcgcaaaccgatctctagcatgaacctgctggttagcagccatgtgtggcgccaggatcataacggctttagccatcaggacccgggcgttaccagcgtgctgctgaacaaatgcttcaataacgaccatgtgatcggcatttattttccggtggatagcaacatgctgctggccgttgcggaaaaatgctataaaagcaccaacaaaattaacgccattattgcgggcaaacaaccggccgcgacctggctgaccctggacgaagcccgcgcggaactggaaaaaggcgccgcggaatggaaatgggcgagcaacgtgaaaagcaacgatgaagcgcagattgtgctggcggcgaccggcgatgtgccgacccaggaaattatggcggcggcggataaactggatgcgatgggcattaaatttaaagtggtgaacgtggtggatctggtgaaactgcaaagcgcgaaagaaaacaacgaagcgctgagcgatgaagaatttgcggaactgtttaccgaagataaaccagtgctgtttgcgtatcatagctatgcgcgcgatgtgcgcggcctgatttatgatcgcccgaaccatgataactttaacgtgcatggctatgaagaacagggcagcaccaccaccccgtatgatatggtgcgcgtgaacaacattgatcgctatgaactgcaagccgaagccctgcgtatgattgatgccgataaatacgccgataagatcaacgaactggaagccttccgccaggaagcgttccagttcgccgttgataacggctatgatcatccggattataccgattgggtgtatagcggcgttaacaccaataagcagggcgcgattagcgccaccgcggcgaccgcgggcgacaacgaataataa BBa_K1585203_sequence 1 atgaccagcccggtgattggcaccccgtggaaaaaactgaacgcgccggtgagcgaagaagcgattgaaggcgtggataaatattggcgcgcggcgaactatctgagcattggccagatttatctgcgtagcaacccgctgatgaaagaaccgtttacccgcgaagatgtgaaacatcgcctggtgggccattggggcaccaccccgggcctgaactttctgattggccatattaaccgcctgattgcggatcatcagcagaacaccgtgattattatgggcccgggccatggcggcccggcgggcaccgcgcagagctatctggatggcacctataccgaatattttccgaacattaccaaagatgaagcgggcctgcaaaaattttttcgccagtttagctatccgggcggcattccgagccattatgcgccggaaaccccgggcagcattcatgaaggcggcgaactgggctatgcgctgagccatgcgtatggcgcggtgatgaacaacccgagcctgtttgttccggcgattgtgggcgatggcgaagcggaaaccggcccgctggcgaccggctggcagagcaacaaactgattaacccgcgcaccgatggcattgtgctgccgattctgcatctgaacggctataaaattgcgaacccgaccattctgagccgcattagcgatgaagaactgcatgaattttttcatggcatgggctatgaaccgtatgaatttgtggcgggctttgataacgaagatcatctgagcattcatcgccgctttgcggaactgtttgaaaccgtgtttgatgaaatttgcgatattaaagcggcggcgcagaccgatgatatgacccgcccgttttatccgatgattatttttcgcaccccgaaaggctggacctgcccgaaatttattgatggcaaaaaaaccgaaggtagctggcgcagccatcaggtgccgctggcgagcgcgcgcgataccgaagcgcattttgaagtgctgaaaaactggctggaaagctataaaccggaagaactgtttgatgaaaacggcgcggtgaaaccggaagtgaccgcgtttatgccgaccggcgaactgcgtattggcgaaaacccgaacgcgaacggtggtcgtattcgcgaagaactgaaactgccgaaactggaagattatgaagttaaagaagtggccgagtatggtcatggttggggtcaactggaagcgacccgccgcctgggcgtttatacccgcgatattattaaaaacaacccggattctttccgcatcttcggtccggatgaaaccgcctctaaccgcctgcaagcggcctatgatgtgaccaacaaacagtgggatgcgggttatctgtctgcccaggttgatgaacatatggcggtgaccggtcaggttaccgaacaactgagcgaacatcagatggaaggctttctggaaggctatctgctgaccggccgccatggcatctggtctagctatgaaagcttcgtgcatgttatcgattctatgctgaaccagcatgccaaatggctggaagcgaccgttcgcgaaattccgtggcgcaaaccgatctctagcatgaacctgctggttagcagccatgtgtggcgccaggatcataacggctttagccatcaggacccgggcgttaccagcgtgctgctgaacaaatgcttcaataacgaccatgtgatcggcatttattttccggtggatagcaacatgctgctggccgttgcggaaaaatgctataaaagcaccaacaaaattaacgccattattgcgggcaaacaaccggccgcgacctggctgaccctggacgaagcccgcgcggaactggaaaaaggcgccgcggaatggaaatgggcgagcaacgtgaaaagcaacgatgaagcgcagattgtgctggcggcgaccggcgatgtgccgacccaggaaattatggcggcggcggataaactggatgcgatgggcattaaatttaaagtggtgaacgtggtggatctggtgaaactgcaaagcgcgaaagaaaacaacgaagcgctgagcgatgaagaatttgcggaactgtttaccgaagataaaccagtgctgtttgcgtatcatagctatgcgcgcgatgtgcgcggcctgatttatgatcgcccgaaccatgataactttaacgtgcatggctatgaagaacagggcagcaccaccaccccgtatgatatggtgcgcgtgaacaacattgatcgctatgaactgcaagccgaagccctgcgtatgattgatgccgataaatacgccgataagatcaacgaactggaagccttccgccaggaagcgttccagttcgccgttgataacggctatgatcatccggattataccgattgggtgtatagcggcgttaacaccaataagcagggcgcgattagcgccaccgcggcgaccgcgggcgacaacgaataataa igem2sbol 1 iGEM to SBOL conversion Conversion of the iGEM parts registry to SBOL2.1 Chris J. Myers James Alastair McLaughlin 2017-03-06T15:00:00.000Z