BBa_K1585223 1 BBa_K1585223 B0034.Xpk.B0015 2015-08-27T11:00:00Z 2015-08-28T09:26:42Z assembled from other parts protein generator of Xpk (phosphoketolase) false false _2002_ 19522 19522 9 false this is a precursor for another part false Michael Osthege component2439647 1 BBa_K1585213 component2439654 1 BBa_B0015 annotation2439654 1 BBa_B0015 range2439654 1 2508 2636 annotation2439647 1 BBa_K1585213 range2439647 1 1 2499 BBa_K1585203 1 BBa_K1585203 XPK 2015-08-24T11:00:00Z 2015-08-28T08:33:31Z Bifidobacterium adolescentis phosphoketolase from Bifidobacterium adolescentis, codon optimized for E.coli, converts Xu5p and pi to actp and g3p false false _2002_ 19522 24470 9 false codon optimized for E.coli false Carolin Gr??tering annotation2439475 1 phosphoketolase range2439475 1 1 2481 BBa_K1585213 1 BBa_K1585213 B0034.XPK 2015-08-24T11:00:00Z 2015-08-28T08:37:34Z Bifidobacterium adolescentis This is the translational unit for the phosphoketolase (XPK). It derives from Bifidobacterium adolescentis and is codon optimized for E. coli. false false _2002_ 19522 24505 9 false RFC10 compatible false Laura Grabowski component2439488 1 BBa_K1585203 component2439486 1 BBa_B0034 annotation2439486 1 BBa_B0034 range2439486 1 1 12 annotation2439488 1 BBa_K1585203 range2439488 1 19 2499 BBa_B0034 1 BBa_B0034 RBS (Elowitz 1999) -- defines RBS efficiency 2003-01-31T12:00:00Z 2015-08-31T04:07:20Z Released HQ 2013 RBS based on Elowitz repressilator. false true _1_ 0 24 7 In stock false Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS. Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a> true Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003. annotation23325 1 conserved range23325 1 5 8 BBa_B0012 1 BBa_B0012 TE from coliphageT7 2003-01-31T12:00:00Z 2015-08-31T04:07:20Z Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>. Released HQ 2013 Transcription terminator for the <i>E.coli</i> RNA polymerase. false false _1_ 0 24 7 In stock false <P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator. false Reshma Shetty annotation1686 1 T7 TE range1686 1 8 27 annotation7020 1 BBa_B0012 range7020 1 1 41 annotation1687 1 stop range1687 1 34 34 annotation1690 1 polya range1690 1 28 41 BBa_B0015 1 BBa_B0015 double terminator (B0010-B0012) 2003-07-16T11:00:00Z 2015-08-31T04:07:20Z Released HQ 2013 Double terminator consisting of BBa_B0010 and BBa_B0012 false true _1_ 0 24 7 In stock false true Reshma Shetty component1916612 1 BBa_B0012 component1916610 1 BBa_B0010 annotation1916612 1 BBa_B0012 range1916612 1 89 129 annotation1916610 1 BBa_B0010 range1916610 1 1 80 BBa_B0010 1 BBa_B0010 T1 from E. coli rrnB 2003-11-19T12:00:00Z 2015-08-31T04:07:20Z Transcriptional terminator consisting of a 64 bp stem-loop. false false _1_ 0 24 7 In stock false true Randy Rettberg annotation7018 1 BBa_B0010 range7018 1 1 80 annotation4184 1 stem_loop range4184 1 12 55 BBa_B0010_sequence 1 ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc BBa_B0034_sequence 1 aaagaggagaaa BBa_K1585213_sequence 1 aaagaggagaaatactagatgaccagcccggtgattggcaccccgtggaaaaaactgaacgcgccggtgagcgaagaagcgattgaaggcgtggataaatattggcgcgcggcgaactatctgagcattggccagatttatctgcgtagcaacccgctgatgaaagaaccgtttacccgcgaagatgtgaaacatcgcctggtgggccattggggcaccaccccgggcctgaactttctgattggccatattaaccgcctgattgcggatcatcagcagaacaccgtgattattatgggcccgggccatggcggcccggcgggcaccgcgcagagctatctggatggcacctataccgaatattttccgaacattaccaaagatgaagcgggcctgcaaaaattttttcgccagtttagctatccgggcggcattccgagccattatgcgccggaaaccccgggcagcattcatgaaggcggcgaactgggctatgcgctgagccatgcgtatggcgcggtgatgaacaacccgagcctgtttgttccggcgattgtgggcgatggcgaagcggaaaccggcccgctggcgaccggctggcagagcaacaaactgattaacccgcgcaccgatggcattgtgctgccgattctgcatctgaacggctataaaattgcgaacccgaccattctgagccgcattagcgatgaagaactgcatgaattttttcatggcatgggctatgaaccgtatgaatttgtggcgggctttgataacgaagatcatctgagcattcatcgccgctttgcggaactgtttgaaaccgtgtttgatgaaatttgcgatattaaagcggcggcgcagaccgatgatatgacccgcccgttttatccgatgattatttttcgcaccccgaaaggctggacctgcccgaaatttattgatggcaaaaaaaccgaaggtagctggcgcagccatcaggtgccgctggcgagcgcgcgcgataccgaagcgcattttgaagtgctgaaaaactggctggaaagctataaaccggaagaactgtttgatgaaaacggcgcggtgaaaccggaagtgaccgcgtttatgccgaccggcgaactgcgtattggcgaaaacccgaacgcgaacggtggtcgtattcgcgaagaactgaaactgccgaaactggaagattatgaagttaaagaagtggccgagtatggtcatggttggggtcaactggaagcgacccgccgcctgggcgtttatacccgcgatattattaaaaacaacccggattctttccgcatcttcggtccggatgaaaccgcctctaaccgcctgcaagcggcctatgatgtgaccaacaaacagtgggatgcgggttatctgtctgcccaggttgatgaacatatggcggtgaccggtcaggttaccgaacaactgagcgaacatcagatggaaggctttctggaaggctatctgctgaccggccgccatggcatctggtctagctatgaaagcttcgtgcatgttatcgattctatgctgaaccagcatgccaaatggctggaagcgaccgttcgcgaaattccgtggcgcaaaccgatctctagcatgaacctgctggttagcagccatgtgtggcgccaggatcataacggctttagccatcaggacccgggcgttaccagcgtgctgctgaacaaatgcttcaataacgaccatgtgatcggcatttattttccggtggatagcaacatgctgctggccgttgcggaaaaatgctataaaagcaccaacaaaattaacgccattattgcgggcaaacaaccggccgcgacctggctgaccctggacgaagcccgcgcggaactggaaaaaggcgccgcggaatggaaatgggcgagcaacgtgaaaagcaacgatgaagcgcagattgtgctggcggcgaccggcgatgtgccgacccaggaaattatggcggcggcggataaactggatgcgatgggcattaaatttaaagtggtgaacgtggtggatctggtgaaactgcaaagcgcgaaagaaaacaacgaagcgctgagcgatgaagaatttgcggaactgtttaccgaagataaaccagtgctgtttgcgtatcatagctatgcgcgcgatgtgcgcggcctgatttatgatcgcccgaaccatgataactttaacgtgcatggctatgaagaacagggcagcaccaccaccccgtatgatatggtgcgcgtgaacaacattgatcgctatgaactgcaagccgaagccctgcgtatgattgatgccgataaatacgccgataagatcaacgaactggaagccttccgccaggaagcgttccagttcgccgttgataacggctatgatcatccggattataccgattgggtgtatagcggcgttaacaccaataagcagggcgcgattagcgccaccgcggcgaccgcgggcgacaacgaataataa BBa_K1585223_sequence 1 aaagaggagaaatactagatgaccagcccggtgattggcaccccgtggaaaaaactgaacgcgccggtgagcgaagaagcgattgaaggcgtggataaatattggcgcgcggcgaactatctgagcattggccagatttatctgcgtagcaacccgctgatgaaagaaccgtttacccgcgaagatgtgaaacatcgcctggtgggccattggggcaccaccccgggcctgaactttctgattggccatattaaccgcctgattgcggatcatcagcagaacaccgtgattattatgggcccgggccatggcggcccggcgggcaccgcgcagagctatctggatggcacctataccgaatattttccgaacattaccaaagatgaagcgggcctgcaaaaattttttcgccagtttagctatccgggcggcattccgagccattatgcgccggaaaccccgggcagcattcatgaaggcggcgaactgggctatgcgctgagccatgcgtatggcgcggtgatgaacaacccgagcctgtttgttccggcgattgtgggcgatggcgaagcggaaaccggcccgctggcgaccggctggcagagcaacaaactgattaacccgcgcaccgatggcattgtgctgccgattctgcatctgaacggctataaaattgcgaacccgaccattctgagccgcattagcgatgaagaactgcatgaattttttcatggcatgggctatgaaccgtatgaatttgtggcgggctttgataacgaagatcatctgagcattcatcgccgctttgcggaactgtttgaaaccgtgtttgatgaaatttgcgatattaaagcggcggcgcagaccgatgatatgacccgcccgttttatccgatgattatttttcgcaccccgaaaggctggacctgcccgaaatttattgatggcaaaaaaaccgaaggtagctggcgcagccatcaggtgccgctggcgagcgcgcgcgataccgaagcgcattttgaagtgctgaaaaactggctggaaagctataaaccggaagaactgtttgatgaaaacggcgcggtgaaaccggaagtgaccgcgtttatgccgaccggcgaactgcgtattggcgaaaacccgaacgcgaacggtggtcgtattcgcgaagaactgaaactgccgaaactggaagattatgaagttaaagaagtggccgagtatggtcatggttggggtcaactggaagcgacccgccgcctgggcgtttatacccgcgatattattaaaaacaacccggattctttccgcatcttcggtccggatgaaaccgcctctaaccgcctgcaagcggcctatgatgtgaccaacaaacagtgggatgcgggttatctgtctgcccaggttgatgaacatatggcggtgaccggtcaggttaccgaacaactgagcgaacatcagatggaaggctttctggaaggctatctgctgaccggccgccatggcatctggtctagctatgaaagcttcgtgcatgttatcgattctatgctgaaccagcatgccaaatggctggaagcgaccgttcgcgaaattccgtggcgcaaaccgatctctagcatgaacctgctggttagcagccatgtgtggcgccaggatcataacggctttagccatcaggacccgggcgttaccagcgtgctgctgaacaaatgcttcaataacgaccatgtgatcggcatttattttccggtggatagcaacatgctgctggccgttgcggaaaaatgctataaaagcaccaacaaaattaacgccattattgcgggcaaacaaccggccgcgacctggctgaccctggacgaagcccgcgcggaactggaaaaaggcgccgcggaatggaaatgggcgagcaacgtgaaaagcaacgatgaagcgcagattgtgctggcggcgaccggcgatgtgccgacccaggaaattatggcggcggcggataaactggatgcgatgggcattaaatttaaagtggtgaacgtggtggatctggtgaaactgcaaagcgcgaaagaaaacaacgaagcgctgagcgatgaagaatttgcggaactgtttaccgaagataaaccagtgctgtttgcgtatcatagctatgcgcgcgatgtgcgcggcctgatttatgatcgcccgaaccatgataactttaacgtgcatggctatgaagaacagggcagcaccaccaccccgtatgatatggtgcgcgtgaacaacattgatcgctatgaactgcaagccgaagccctgcgtatgattgatgccgataaatacgccgataagatcaacgaactggaagccttccgccaggaagcgttccagttcgccgttgataacggctatgatcatccggattataccgattgggtgtatagcggcgttaacaccaataagcagggcgcgattagcgccaccgcggcgaccgcgggcgacaacgaataataatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata BBa_K1585203_sequence 1 atgaccagcccggtgattggcaccccgtggaaaaaactgaacgcgccggtgagcgaagaagcgattgaaggcgtggataaatattggcgcgcggcgaactatctgagcattggccagatttatctgcgtagcaacccgctgatgaaagaaccgtttacccgcgaagatgtgaaacatcgcctggtgggccattggggcaccaccccgggcctgaactttctgattggccatattaaccgcctgattgcggatcatcagcagaacaccgtgattattatgggcccgggccatggcggcccggcgggcaccgcgcagagctatctggatggcacctataccgaatattttccgaacattaccaaagatgaagcgggcctgcaaaaattttttcgccagtttagctatccgggcggcattccgagccattatgcgccggaaaccccgggcagcattcatgaaggcggcgaactgggctatgcgctgagccatgcgtatggcgcggtgatgaacaacccgagcctgtttgttccggcgattgtgggcgatggcgaagcggaaaccggcccgctggcgaccggctggcagagcaacaaactgattaacccgcgcaccgatggcattgtgctgccgattctgcatctgaacggctataaaattgcgaacccgaccattctgagccgcattagcgatgaagaactgcatgaattttttcatggcatgggctatgaaccgtatgaatttgtggcgggctttgataacgaagatcatctgagcattcatcgccgctttgcggaactgtttgaaaccgtgtttgatgaaatttgcgatattaaagcggcggcgcagaccgatgatatgacccgcccgttttatccgatgattatttttcgcaccccgaaaggctggacctgcccgaaatttattgatggcaaaaaaaccgaaggtagctggcgcagccatcaggtgccgctggcgagcgcgcgcgataccgaagcgcattttgaagtgctgaaaaactggctggaaagctataaaccggaagaactgtttgatgaaaacggcgcggtgaaaccggaagtgaccgcgtttatgccgaccggcgaactgcgtattggcgaaaacccgaacgcgaacggtggtcgtattcgcgaagaactgaaactgccgaaactggaagattatgaagttaaagaagtggccgagtatggtcatggttggggtcaactggaagcgacccgccgcctgggcgtttatacccgcgatattattaaaaacaacccggattctttccgcatcttcggtccggatgaaaccgcctctaaccgcctgcaagcggcctatgatgtgaccaacaaacagtgggatgcgggttatctgtctgcccaggttgatgaacatatggcggtgaccggtcaggttaccgaacaactgagcgaacatcagatggaaggctttctggaaggctatctgctgaccggccgccatggcatctggtctagctatgaaagcttcgtgcatgttatcgattctatgctgaaccagcatgccaaatggctggaagcgaccgttcgcgaaattccgtggcgcaaaccgatctctagcatgaacctgctggttagcagccatgtgtggcgccaggatcataacggctttagccatcaggacccgggcgttaccagcgtgctgctgaacaaatgcttcaataacgaccatgtgatcggcatttattttccggtggatagcaacatgctgctggccgttgcggaaaaatgctataaaagcaccaacaaaattaacgccattattgcgggcaaacaaccggccgcgacctggctgaccctggacgaagcccgcgcggaactggaaaaaggcgccgcggaatggaaatgggcgagcaacgtgaaaagcaacgatgaagcgcagattgtgctggcggcgaccggcgatgtgccgacccaggaaattatggcggcggcggataaactggatgcgatgggcattaaatttaaagtggtgaacgtggtggatctggtgaaactgcaaagcgcgaaagaaaacaacgaagcgctgagcgatgaagaatttgcggaactgtttaccgaagataaaccagtgctgtttgcgtatcatagctatgcgcgcgatgtgcgcggcctgatttatgatcgcccgaaccatgataactttaacgtgcatggctatgaagaacagggcagcaccaccaccccgtatgatatggtgcgcgtgaacaacattgatcgctatgaactgcaagccgaagccctgcgtatgattgatgccgataaatacgccgataagatcaacgaactggaagccttccgccaggaagcgttccagttcgccgttgataacggctatgatcatccggattataccgattgggtgtatagcggcgttaacaccaataagcagggcgcgattagcgccaccgcggcgaccgcgggcgacaacgaataataa BBa_B0012_sequence 1 tcacactggctcaccttcgggtgggcctttctgcgtttata BBa_B0015_sequence 1 ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata igem2sbol 1 iGEM to SBOL conversion Conversion of the iGEM parts registry to SBOL2.1 Chris J. Myers James Alastair McLaughlin 2017-03-06T15:00:00.000Z