BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_K1223014
1
BBa_K1223014
tRNA-Pyl (pylT) gene from Methanosarcina barkeri str. Fusaro
2013-10-02T11:00:00Z
2015-05-08T01:09:43Z
Methanosarcina barkeri str. Fusaro genomic sequence.
this is the DNA coding sequence for the tRNA of pyrrolysine from the Archaea Methanosarcina barkeri str. Fusaro.
this tRNA is a part of the machinery that is used to incorporate pyrolysine into proteins in E.coli.
the tRNA synthetase that charges the tRNA with pyrrolysine can be found in biobrick BBa_k1223013.
the tRNA has the anticodon CUA - which means that the sense codon needed to incorporate pyrrolysine is TAG - the amber stop codon.
false
false
_1537_
0
18143
9
It's complicated
true
this is a part of the pyrrolysine incorporation machinery.
false
Orr Schlesinger
annotation2367519
1
CUA anticodon
range2367519
1
31
33
annotation2367517
1
pyrrolysine tRNA CDS
range2367517
1
1
72
BBa_I712074
1
BBa_I712074
T7 promoter (strong promoter from T7 bacteriophage)
2007-10-21T11:00:00Z
2015-08-31T04:07:46Z
T7 bacteriophage
T7 promoter is very specific promoter which is transcribed only by specific T7 RNA polymerase. Usually this promoter is used in expression systems where T7 promoter is cotransfected with T7 RNA polymerase. That ensures strong transcription of desired genes.
false
false
_130_
0
1856
9
In stock
false
true
Rok Gaber
BBa_K1593002
1
BBa_K1593002
tRNA system
2015-08-17T11:00:00Z
2015-08-18T06:05:08Z
parts
tRNA
false
false
_2010_
27863
27863
9
It's complicated
false
null
false
Zeyu Shen
component2436096
1
BBa_I712074
component2436098
1
BBa_B0034
component2436092
1
BBa_I712074
component2436095
1
BBa_K1223014
component2436099
1
BBa_K1492002
annotation2436098
1
BBa_B0034
range2436098
1
189
200
annotation2436096
1
BBa_I712074
range2436096
1
135
180
annotation2436095
1
BBa_K1223014
range2436095
1
55
126
annotation2436099
1
BBa_K1492002
range2436099
1
207
1127
annotation2436092
1
BBa_I712074
range2436092
1
1
46
BBa_K1492002
1
Mj TyrRS
Methanococcus jannaschii tyrosyl-tRNA synthetase
2014-07-27T11:00:00Z
2015-05-08T01:10:44Z
-
Pyrrolysyl-tRNA Synthetase introduces the Non Natural Amino acid p-Azido-L-Phenylalanine at the TAG codon.
false
false
_1872_
0
21091
9
In stock
false
-
false
Wiggert Altenburg
BBa_B0034_sequence
1
aaagaggagaaa
BBa_K1223014_sequence
1
gggaacctgatcatgtagatcgaatggactctaaatccgttcagccgggttagattcccggggtttccgcca
BBa_I712074_sequence
1
taatacgactcactatagggaatacaagctacttgttctttttgca
BBa_K1593002_sequence
1
taatacgactcactatagggaatacaagctacttgttctttttgcatactagaggggaacctgatcatgtagatcgaatggactctaaatccgttcagccgggttagattcccggggtttccgccatactagagtaatacgactcactatagggaatacaagctacttgttctttttgcatactagagaaagaggagaaatactagatggacgagttcgaaatgattaaacgcaacaccagcgaaattatctctgaagaagagctgcgcgaggtgctgaagaaagacgagaagagcgcgactattggctttgagccgtccggtaaaattcacctgggtcactacctgcaaatcaagaagatgattgatctgcaaaacgctggttttgacatcattatcctgctggcggacctgcacgcctacctgaatcaaaagggcgagctggatgagattcgcaagatcggcgactacaataagaaagtcttcgaagccatgggtttgaaggctaaatacgtctacggtagcaattttcagctggataaggattacacgttgaatgtgtaccgtctggcgctgaaaaccacgctgaaacgcgcccgtcgttccatggagctgattgcgcgcgaggatgagaatccaaaagttgctgaggttatttaccctattatgcaagttaatccgttgcactaccagggtgttgatgttgccgtcggtggtatggagcaacgcaaaattcacatgctggcacgtgaactgctgccgaaaaaggttgtctgtattcataatccggtcctgaccggcctggatggcgagggtaaaatgagcagcagcaagggtaactttattgcagttgacgatagcccggaagaaatccgtgcgaagatcaagaaagcgtactgcccggcaggcgtggttgagggtaacccgatcatggaaatcgccaagtattttctggaatacccactgacgattaagcgcccggagaaatttggcggcgacctgaccgtcaacagctacgaggagctggaaagcttgtttaagaacaaagaactgcatccgatgcgcctgaaaaacgccgtggcggaagagctgattaagattctggaaccaattcgcaaacgtctgtaa
BBa_K1492002_sequence
1
atggacgagttcgaaatgattaaacgcaacaccagcgaaattatctctgaagaagagctgcgcgaggtgctgaagaaagacgagaagagcgcgactattggctttgagccgtccggtaaaattcacctgggtcactacctgcaaatcaagaagatgattgatctgcaaaacgctggttttgacatcattatcctgctggcggacctgcacgcctacctgaatcaaaagggcgagctggatgagattcgcaagatcggcgactacaataagaaagtcttcgaagccatgggtttgaaggctaaatacgtctacggtagcaattttcagctggataaggattacacgttgaatgtgtaccgtctggcgctgaaaaccacgctgaaacgcgcccgtcgttccatggagctgattgcgcgcgaggatgagaatccaaaagttgctgaggttatttaccctattatgcaagttaatccgttgcactaccagggtgttgatgttgccgtcggtggtatggagcaacgcaaaattcacatgctggcacgtgaactgctgccgaaaaaggttgtctgtattcataatccggtcctgaccggcctggatggcgagggtaaaatgagcagcagcaagggtaactttattgcagttgacgatagcccggaagaaatccgtgcgaagatcaagaaagcgtactgcccggcaggcgtggttgagggtaacccgatcatggaaatcgccaagtattttctggaatacccactgacgattaagcgcccggagaaatttggcggcgacctgaccgtcaacagctacgaggagctggaaagcttgtttaagaacaaagaactgcatccgatgcgcctgaaaaacgccgtggcggaagagctgattaagattctggaaccaattcgcaaacgtctgtaa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z