BBa_K1631008
1
BBa_K1631008
rbs - ColicinE3 - rbs - Colicin Immunity protein - d.term
2015-09-13T11:00:00Z
2015-09-14T07:16:09Z
Assembly
When this is placed under a promoter, Colicin-E3(BBa_K1631002) is co-expressed with its immunity protein(BBa_K1631004).
false
false
_2048_
23567
23567
9
false
none
false
Yuto Yamanaka
component2455437
1
BBa_K1631004
component2455434
1
BBa_K1631002
component2455444
1
BBa_B0015
annotation2455444
1
BBa_B0015
range2455444
1
1955
2083
annotation2455437
1
BBa_K1631004
range2455437
1
1677
1946
annotation2455434
1
BBa_K1631002
range2455434
1
1
1668
BBa_B0010
1
BBa_B0010
T1 from E. coli rrnB
2003-11-19T12:00:00Z
2015-08-31T04:07:20Z
Transcriptional terminator consisting of a 64 bp stem-loop.
false
false
_1_
0
24
7
In stock
false
true
Randy Rettberg
annotation4184
1
stem_loop
range4184
1
12
55
annotation7018
1
BBa_B0010
range7018
1
1
80
BBa_B0012
1
BBa_B0012
TE from coliphageT7
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>.
Released HQ 2013
Transcription terminator for the <i>E.coli</i> RNA polymerase.
false
false
_1_
0
24
7
In stock
false
<P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator.
false
Reshma Shetty
annotation1690
1
polya
range1690
1
28
41
annotation1686
1
T7 TE
range1686
1
8
27
annotation1687
1
stop
range1687
1
34
34
annotation7020
1
BBa_B0012
range7020
1
1
41
BBa_K1631014
1
BBa_K1631014
Pconst(strong) -rbs- Colicin E3 -rbs- Colicin Immunity protein -d.tem
2015-09-13T11:00:00Z
2015-09-14T07:59:58Z
Assembly
Colicin-E3 and its immunity protein is co-expressed under BBa_J23101
false
false
_2048_
23567
23567
9
false
none
false
Yuto Yamanaka
component2455555
1
BBa_K1631008
component2455541
1
BBa_J23101
annotation2455555
1
BBa_K1631008
range2455555
1
44
2126
annotation2455541
1
BBa_J23101
range2455541
1
1
35
BBa_J23101
1
BBa_J23101
constitutive promoter family member
2006-08-03T11:00:00Z
2015-08-31T04:08:40Z
later
Released HQ 2013
later
false
true
_52_
0
483
95
In stock
true
N/A
true
John Anderson
BBa_K1631002
1
BBa_K1631002
Translational unit of Colicin-E3
2015-09-11T11:00:00Z
2015-09-14T03:43:50Z
pColE3-CA38
Colicin-E3 cleave 16SrRNA at a specific site.
This activity is inhibited by immunity protein for Colicin-E3(BBa_).
When lysis protein for Colicin-E3(BBa_) is co-expressed, Colicin-E3 is emited to environment and kill other strain.
Colicin is a type of bacteriocin produced by Escherichia coli.
false
false
_2048_
23567
23567
9
false
none
false
Yuto Yamanaka
annotation2452986
1
BBa_B0034
range2452986
1
1
12
annotation2452987
1
Colicin-E3
range2452987
1
13
1668
BBa_B0015
1
BBa_B0015
double terminator (B0010-B0012)
2003-07-16T11:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
Double terminator consisting of BBa_B0010 and BBa_B0012
false
true
_1_
0
24
7
In stock
false
true
Reshma Shetty
component1916610
1
BBa_B0010
component1916612
1
BBa_B0012
annotation1916612
1
BBa_B0012
range1916612
1
89
129
annotation1916610
1
BBa_B0010
range1916610
1
1
80
BBa_K1631004
1
BBa_K1631004
Tlanslational unit of Immunity protein for Colicin-E3
2015-09-12T11:00:00Z
2015-09-13T12:52:31Z
pColE3-CA38
Immunity protein for Colicin-E3 binds in between the Translocation domain and Ctalitic domain. Curiously, immunity protein does not block the active site.[1] It is considered that immunity protein blocks access of this enzyme to the ribosome.
Colicins are a cytotoxins which are released to environment and kill other related strains.
false
false
_2048_
23567
23567
9
false
none
false
Yuto Yamanaka
annotation2453060
1
BBa_B0034
range2453060
1
1
12
annotation2453061
1
Colicin Immunity protein
range2453061
1
13
270
BBa_B0010_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc
BBa_K1631008_sequence
1
aaagaggagaaaatgtctggcggtgacggtcgtggtcacaatactggtgctcattctacatctggcaacatcaacggcggtcctactggtcttggtgttggtggcggtgcatctgacggttctggctggtcttccgagaacaatccatggggtggcggttctggttctggtattcactggggcggtggctctggtcatggtaacggtggcggtaatggtaactccggtggcggttctggtaccggtggtaacctgtctgcggttgcagctccagttgcattcggtttcccagcactatctactcctggtgcaggtggtctagcagtttctatctcagcaggtgcactgtcagcagcaatcgcggatatcatggcagcgctgaaaggtccattcaaattcggtctgtggggtgttgcgctgtacggtgttctgccgtctcagatcgcgaaagacgacccgaacatgatgtctaaaatcgttacatctctgccggcggacgacatcaccgaatctccggtttcttctctgccgctggacaaggctaccgttaatgtcaacgtacgtgtagttgatgacgttaaagacgaacgtcagaacatatctgtagtttctggtgttccgatgtctgttccagtcgttgatgctaagcctactgagcgtccaggcgtattcactgcgtctatacctggcgctccagtactgaacatctccgtcaataactctactccagcggttcagactctatctccaggcgttactaataacaccgacaaagacgtacgaccagcaggcttcactcaaggaggtaatacacgtgacgcggttatccgattcccgaaagactccggtcataatgcggtctacgtatctgtatctgacgtactgtctccggatcaggtcaagcagcgtcaggacgaggaaaaccgccgtcaacaggagtgggacgcaactcatccagttgaagcagctgagcgtaactacgagcgtgcacgtgctgagctgaatcaggcgaacgaggacgttgcacgtaatcaagagcgtcaggcgaaagcggtacaggtctacaattctcgtaagtccgaactggacgcagctaacaagacacttgcagacgcaatcgcggaaatcaaacagttcaaccgtttcgcacatgaccctatggcaggtggtcaccgtatgtggcagatggcaggtctgaaagcacagcgtgcacagaccgacgttaacaacaaacaagcagcgttcgacgcggcggcgaaagaaaaatctgacgcagacgcagcactgtcttctgcgatggaatctcgtaaaaaaaaagaagacaaaaaacgttctgcggaaaacaacctgaacgacgaaaaaaacaaaccgcgtaaaggtttcaaagactacggtcacgactaccatccagctccgaagactgagaacatcaaaggtctaggcgacctgaaaccaggtatcccgaaaaccccgaaacagaacggtggtggtaaacgtaaacgttggaccggtgacaaaggtcgtaagatctacgagtgggattctcagcacggtgagctagaaggctatcgtgcatctgacggtcagcacctgggttctttcgacccaaaaaccggtaaccagctgaaaggtccagacccgaaacgtaacatcaaaaaatacctgtaatactagagaaagaggagaaaatgggtctgaaactggacctgacctggttcgacaaatctaccgaagacttcaaaggtgaagaatactctaaagacttcggtgacgacggttctgttatggaatctctgggtgttccgttcaaagacaacgttaacaacggttgcttcgacgttatcgcggaatgggttccactactacagccgtacttcaaccaccagatcgacatctctgacaacgaatacttcgtttctttcgactaccgtgacggtgactggtaatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_K1631002_sequence
1
aaagaggagaaaatgtctggcggtgacggtcgtggtcacaatactggtgctcattctacatctggcaacatcaacggcggtcctactggtcttggtgttggtggcggtgcatctgacggttctggctggtcttccgagaacaatccatggggtggcggttctggttctggtattcactggggcggtggctctggtcatggtaacggtggcggtaatggtaactccggtggcggttctggtaccggtggtaacctgtctgcggttgcagctccagttgcattcggtttcccagcactatctactcctggtgcaggtggtctagcagtttctatctcagcaggtgcactgtcagcagcaatcgcggatatcatggcagcgctgaaaggtccattcaaattcggtctgtggggtgttgcgctgtacggtgttctgccgtctcagatcgcgaaagacgacccgaacatgatgtctaaaatcgttacatctctgccggcggacgacatcaccgaatctccggtttcttctctgccgctggacaaggctaccgttaatgtcaacgtacgtgtagttgatgacgttaaagacgaacgtcagaacatatctgtagtttctggtgttccgatgtctgttccagtcgttgatgctaagcctactgagcgtccaggcgtattcactgcgtctatacctggcgctccagtactgaacatctccgtcaataactctactccagcggttcagactctatctccaggcgttactaataacaccgacaaagacgtacgaccagcaggcttcactcaaggaggtaatacacgtgacgcggttatccgattcccgaaagactccggtcataatgcggtctacgtatctgtatctgacgtactgtctccggatcaggtcaagcagcgtcaggacgaggaaaaccgccgtcaacaggagtgggacgcaactcatccagttgaagcagctgagcgtaactacgagcgtgcacgtgctgagctgaatcaggcgaacgaggacgttgcacgtaatcaagagcgtcaggcgaaagcggtacaggtctacaattctcgtaagtccgaactggacgcagctaacaagacacttgcagacgcaatcgcggaaatcaaacagttcaaccgtttcgcacatgaccctatggcaggtggtcaccgtatgtggcagatggcaggtctgaaagcacagcgtgcacagaccgacgttaacaacaaacaagcagcgttcgacgcggcggcgaaagaaaaatctgacgcagacgcagcactgtcttctgcgatggaatctcgtaaaaaaaaagaagacaaaaaacgttctgcggaaaacaacctgaacgacgaaaaaaacaaaccgcgtaaaggtttcaaagactacggtcacgactaccatccagctccgaagactgagaacatcaaaggtctaggcgacctgaaaccaggtatcccgaaaaccccgaaacagaacggtggtggtaaacgtaaacgttggaccggtgacaaaggtcgtaagatctacgagtgggattctcagcacggtgagctagaaggctatcgtgcatctgacggtcagcacctgggttctttcgacccaaaaaccggtaaccagctgaaaggtccagacccgaaacgtaacatcaaaaaatacctgtaa
BBa_K1631004_sequence
1
aaagaggagaaaatgggtctgaaactggacctgacctggttcgacaaatctaccgaagacttcaaaggtgaagaatactctaaagacttcggtgacgacggttctgttatggaatctctgggtgttccgttcaaagacaacgttaacaacggttgcttcgacgttatcgcggaatgggttccactactacagccgtacttcaaccaccagatcgacatctctgacaacgaatacttcgtttctttcgactaccgtgacggtgactggtaa
BBa_J23101_sequence
1
tttacagctagctcagtcctaggtattatgctagc
BBa_K1631014_sequence
1
tttacagctagctcagtcctaggtattatgctagctactagagaaagaggagaaaatgtctggcggtgacggtcgtggtcacaatactggtgctcattctacatctggcaacatcaacggcggtcctactggtcttggtgttggtggcggtgcatctgacggttctggctggtcttccgagaacaatccatggggtggcggttctggttctggtattcactggggcggtggctctggtcatggtaacggtggcggtaatggtaactccggtggcggttctggtaccggtggtaacctgtctgcggttgcagctccagttgcattcggtttcccagcactatctactcctggtgcaggtggtctagcagtttctatctcagcaggtgcactgtcagcagcaatcgcggatatcatggcagcgctgaaaggtccattcaaattcggtctgtggggtgttgcgctgtacggtgttctgccgtctcagatcgcgaaagacgacccgaacatgatgtctaaaatcgttacatctctgccggcggacgacatcaccgaatctccggtttcttctctgccgctggacaaggctaccgttaatgtcaacgtacgtgtagttgatgacgttaaagacgaacgtcagaacatatctgtagtttctggtgttccgatgtctgttccagtcgttgatgctaagcctactgagcgtccaggcgtattcactgcgtctatacctggcgctccagtactgaacatctccgtcaataactctactccagcggttcagactctatctccaggcgttactaataacaccgacaaagacgtacgaccagcaggcttcactcaaggaggtaatacacgtgacgcggttatccgattcccgaaagactccggtcataatgcggtctacgtatctgtatctgacgtactgtctccggatcaggtcaagcagcgtcaggacgaggaaaaccgccgtcaacaggagtgggacgcaactcatccagttgaagcagctgagcgtaactacgagcgtgcacgtgctgagctgaatcaggcgaacgaggacgttgcacgtaatcaagagcgtcaggcgaaagcggtacaggtctacaattctcgtaagtccgaactggacgcagctaacaagacacttgcagacgcaatcgcggaaatcaaacagttcaaccgtttcgcacatgaccctatggcaggtggtcaccgtatgtggcagatggcaggtctgaaagcacagcgtgcacagaccgacgttaacaacaaacaagcagcgttcgacgcggcggcgaaagaaaaatctgacgcagacgcagcactgtcttctgcgatggaatctcgtaaaaaaaaagaagacaaaaaacgttctgcggaaaacaacctgaacgacgaaaaaaacaaaccgcgtaaaggtttcaaagactacggtcacgactaccatccagctccgaagactgagaacatcaaaggtctaggcgacctgaaaccaggtatcccgaaaaccccgaaacagaacggtggtggtaaacgtaaacgttggaccggtgacaaaggtcgtaagatctacgagtgggattctcagcacggtgagctagaaggctatcgtgcatctgacggtcagcacctgggttctttcgacccaaaaaccggtaaccagctgaaaggtccagacccgaaacgtaacatcaaaaaatacctgtaatactagagaaagaggagaaaatgggtctgaaactggacctgacctggttcgacaaatctaccgaagacttcaaaggtgaagaatactctaaagacttcggtgacgacggttctgttatggaatctctgggtgttccgttcaaagacaacgttaacaacggttgcttcgacgttatcgcggaatgggttccactactacagccgtacttcaaccaccagatcgacatctctgacaacgaatacttcgtttctttcgactaccgtgacggtgactggtaatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_B0012_sequence
1
tcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_B0015_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z