BBa_K1723004
1
BBa_K1723004
sgRNA Z35 expressing cassette
2015-09-14T11:00:00Z
2015-09-15T10:26:46Z
this part was fully synthesized.
This part is expressing the sgRNA (single guide RNA) Z0 that can bind to dCas9-ω (BBa_K1723000). The complex was designed to bind the PAM rich URS J23117 promoter (BBa_K1723001) to activate the production of the target gene linked to the promoter. This part is a part of a gene regulation system built with dCas9-ω, with the parts sgRNA Z4 expressing cassette (BBa_K1723003) and gRNA Z35 expressing cassette (BBa_K1723004). This sgRNA coding sequence was biobricked with the promoter pBAD and its terminator, both used for our experiments. As the gRNA sequence has to start the first base after the promoter it couldn't have been used with the standard biobrick system so the promoter is provided already. It is possible to PCR out the part to put it under another promoter, but he terminator is specific and it is recommended to keep it.
Discover all the parts that can work with this one:
http://2015.igem.org/Team:EPF_Lausanne/Part_Collection
false
false
_2143_
26018
26018
9
false
This part was design on the model for sgRNAs on the paper from Alec AK Nielsen & Christopher A Voigt [3] and the specific sequence for the gRNA Z35 was designed from the sequence of the plasmid pWJ89 D.Bikard [1] sent us.
false
Emilie Cuillery
annotation2457055
1
sgRNA scaffold
range2457055
1
193
234
annotation2457056
1
S. Pyogenes terminator
range2457056
1
235
274
annotation2457053
1
pBAD promoter
range2457053
1
1
172
annotation2457054
1
Z35 specific sequence
range2457054
1
173
192
BBa_K1723004_sequence
1
gggaccaaagccatgacaaaaacgcgtaacaaaagtgtctataatcacggcagaaaagtccacattgattatttgcacggcgtcacactttgtatgccatagcatttttatccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccataactgagctagctgtcaagacgttttagagctagaaatagcaagttaaaataaggctagtccgattgcaacttgaaaaagtggcaccgagcggtgcttttttt
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z