BBa_B0032
1
BBa_B0032
RBS.3 (medium) -- derivative of BBa_0030
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
Weak1 RBS based on Ron Weiss thesis. Strength is considered relative to <bb_part>BBa_B0030</bb_part>, <bb_part>BBa_B0031</bb_part>, <bb_part>BBa_B0033</bb_part>.
false
true
_41_44_48_46_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix ("RBS-2" in figure 4-14 of thesis). <P>
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation7027
1
BBa_B0032
range7027
1
1
13
annotation1709
1
RBS-3\Weak
range1709
1
1
13
annotation1710
1
RBS
range1710
1
7
10
BBa_K322122
1
BBa_K322122
Phycocyanobilin synthesis operon
2010-09-25T11:00:00Z
2015-05-08T01:11:59Z
This is identical to K098010, deposited by Harvard 2008, except that we have transferred it to pSB1C3.
Phycobilin is chromophores (light-capturing molecules) found in cyanobacteria and in the chloroplasts of red algae, glaucophytes and some cryptomonads (though not in green algae and higher plants), used in light sensor.
false
false
_441_
0
6225
9
It's complicated
true
Features: heme oxygenase coding sequence 63 to 629; pcyA coding sequence 650 to 1396; terminator B0015 bases 1403 to 1502 (according to the K098010 annotation, but no scar!).
Notes: the start sequence is not quite as K098010(made by Havard 2008). Basically just the first 5 bases are different from K098010, of which the first 5 bases are ctgat. Also base 24 is T rather than G. All of these are absolutely clear on the chromatogram.
false
Chris French and Richard Edward Partridge-Hicks
annotation2083038
1
Terminator (B0015)
range2083038
1
1403
1502
annotation2083040
1
J23110
range2083040
1
1
35
annotation2083041
1
B0032
range2083041
1
43
54
annotation2083042
1
rbs
range2083042
1
630
644
annotation2083039
1
pcyA
range2083039
1
650
1396
annotation2083037
1
Heme oxygenase
range2083037
1
63
629
BBa_K1725410
1
BBa_K1725410
uirS
2015-09-09T11:00:00Z
2015-09-10T12:27:34Z
.
.
false
false
_2146_
27284
27284
9
false
.
false
Mhairi Davidson
BBa_K1725445
1
BBa_K1725445
J23106 + RBS + uirS + K322122
2015-09-16T11:00:00Z
2015-09-17T07:06:32Z
.
.
false
false
_2146_
27285
27285
9
false
.
false
James Provan
component2465874
1
BBa_K1725410
component2465881
1
BBa_K322122
component2465870
1
BBa_J23106
component2465872
1
BBa_B0032
annotation2465881
1
BBa_K322122
range2465881
1
2606
4136
annotation2465872
1
BBa_B0032
range2465872
1
44
56
annotation2465874
1
BBa_K1725410
range2465874
1
63
2597
annotation2465870
1
BBa_J23106
range2465870
1
1
35
BBa_J23106
1
BBa_J23106
constitutive promoter family member
2006-08-13T11:00:00Z
2015-08-31T04:08:40Z
Isolated from library of promoters
Released HQ 2013
Later
false
true
_52_
0
483
95
In stock
true
N/A
true
John Anderson
BBa_K1725445_sequence
1
tttacggctagctcagtcctaggtatagtgctagctactagagtcacacaggaaagtactagatggcaatcaccgcatttaccctgggggattttttccaagccaacagctatataccccacggccattgctacctttggcaaactcccctggtctggctccacgtcagcgctgattttttcacggcgatcgcctactactctattcccttaactctgctctactttttgcggaagcgccaagatattccttttcctaatattattttcctgtttagtacttttattttatgctgtggcaccagtcacttttttgacattatcaccctttggtaccctatttattggatatccggtacagtcaaagcctccatggcgatcgtctctattatcactgtgtttgaattaattcaaattgtacccaatgccctaaatttaaaatcccccacggaattagctaccctcaatctggctctaaatcaagaaattaaagaaaggcaaacagcggaaatagcattgcaggagttaaacaataatcttgaaaaaagagtggaagaccgcactacccaattagcaaaaataaatcaacaattagaacaggaaattgaagataaaacccgggcaaaagaagatctcgaaaaaaataaagatcaattggcgcaattggctgctattgtcgaatcttcccaggacgcaattattagtaaaaccctagatggtaacatcaccagttggaacgagtctgcggaaagattatttggctacacagcagaagaaatgattggaagtcatatcaccaaacttattcctgaggaattaatcttggaagaagaccttattgctgaatgcatccgccaaggtcagagaattaacacctacgaaactcaaagacagcgtaaagatggtactaaaattgatgttgccctgaccatttctcccattcgagatgaacacaaaaatgtagtgggagcctccaaaattgttagggatattaccgccagattggatgtggaaaatgccctacgggaaagtcaatattttattgaaaaattagctaattattctccccagattctttatattttagaccccattgcttggaaaaatatttatgtcaattatcaatccttcgaaatcctaggctacactccagaagaatttaaaaatgggggaacggagctgttgttaaatattgtgcatcccgatgacatcccaaccctttacgaaaataagaatttttggcaaaagtcccaggaaggccaagtgttgaccactgaatatcgaatgcgccacaaaaatggttcttggcggtggctacgttctcgggaagtggtttttgctagggatgattatgggcaagttactaaggttttgggcacagcccaggatattagtgatagcaaagaacaggaacaaagactttatgagcaaggccgccgcgaatcattattaagggaaattacccagcgtatccgtcagtctttagatctgccaactatttttaacacagtagtgcaggaaattcgtcagtttttggaagcagatcgggtagttatttttcagttttcacccgactctgacttttccgttggtaatattgtggcagagtcggtattggctccatttaagccaatcattaatagtgcaattgaagaaacttgttttagtaataactatgcccaaaggtatcagcagggcagaatccaggtcattgaggatattcaccagtcccatcttaggcaatgccacattgactttcttgccaggctacaggtcagggcaaacctagtgctaccactaattaatgatgccattttgtggggcttattgtgtattcatcaatgtgacagttctcgagtttgggaacaaacagaaattgatctgctcaagcagatcactaatcagtttgaaattgccatccaacaggctactttgtacgagcaggctcaacaagaattggcttctaaaaatcagctttttgtacaattaaccaacgaattagagcaaaaaaaagtattgcttaaggaaattcatcatcgagttaaaaacaatttgcaaattatgtctagtttactttatttgcaatttagtaaggcttctccagccatccagcaattgagtgaggaataccagaatcgcattcaatccatggcattgattcatgagcagttatatcgtagtgaagacttagctaatattgattttagtcaatatcttaaaaatttgactcacaatatctgccaaagttacggctgtaatactgatagtattaaaattaaattgttggttgaacaagttaaagttcctttagagcagtccattcctttgggattaattattcaggaattagtttccaatgctttaaaacatgctttcccaacgacggaaggggaaatttcgattaaattcacttcaatgaacagtcactatagtttacaggtgtgggataacggagttggaatttccagggatatagatttggaaaatacagatagtttgggcatgcaacttatctacagcctaactgaacaactccagggagaattgcactatgaatatgtcggtggcgctcaatttgggttggaattttcactttaatactagagtttacggctagctcagtcctaggtattatgctagctactagagtcacacaggaaaggtgcacatggaagaggaaatggcaaaatttaaggaccatcccatcctcagccacatttacttccccgaactcaaccgcaaacaaagcctagagcaagacctgcaattctattacggctccaactggcggcaagaagtgaaaatttctgccgctggccaagcctatgtggaccgagtccggcaagtggccgctacggcccctgaattgttggtggcccattcctacacccgttacctgggggatctttccggcggtcaaattctcaagaaaattgcccaaaatgccatgaatctccacgatggtggcacagctttctatgaatttgccgacattgatgacgaaaaggcttttaaaaatacctaccgtcaagctatgaatgatctgcccattgaccaagccaccgccgaacggattgtggatgaagccaatgacgcctttgccatgaacatgaaaatgttcaacgaacttgaaggcaacctgatcaaggcgatcggcattatggtgttcaacagcctcacccgtcgccgcagtcaaggcagcaccgaagttggcctcgccacctccgaaggctagttaaagaggagaaaggatccatggccgtcactgatttaagtttgaccaattcttccctgatgcctacgttgaacccgatgattcaacagttggccctggcgatcgccgctagttggcaaagtttacccctcaagccctatcaattgccggaggatttgggctacgtagaaggccgcctggaaggggaaaagttagtgattgaaaatcggtgctaccaaacgccccagtttcgcaaaatgcatttggagttggccaaggtgggcaaagggttggatattctccactgtgtaatgtttcctgagcctttatacggtctacctttgtttggctgtgacattgtggccggccccggtggagtaagtgcggctattgcggatctatcccccacccaaagcgatcgccaattgcccgcagcgtaccaaaaatcattggcagagctaggccagccagaatttgagcaacaacgggaattgcccccctggggagaaatattttctgaatattgtttattcatccgtcccagcaatgtcactgaagaagaaagatttgtacaaagggtagtggactttttgcaaattcattgtcaccaatccatcgttgccgaacccttgtctgaagctcaaactttggagcaccgtcaggggcaaattcattactgccaacaacaacagaaaaatgataaaacccgtcgggtactggaaaaagcttttggggaagcttgggcggaacggtatatgagccaagtcttatttgatgttatccaataaggtaccccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_B0032_sequence
1
tcacacaggaaag
BBa_J23106_sequence
1
tttacggctagctcagtcctaggtatagtgctagc
BBa_K1725410_sequence
1
atggcaatcaccgcatttaccctgggggattttttccaagccaacagctatataccccacggccattgctacctttggcaaactcccctggtctggctccacgtcagcgctgattttttcacggcgatcgcctactactctattcccttaactctgctctactttttgcggaagcgccaagatattccttttcctaatattattttcctgtttagtacttttattttatgctgtggcaccagtcacttttttgacattatcaccctttggtaccctatttattggatatccggtacagtcaaagcctccatggcgatcgtctctattatcactgtgtttgaattaattcaaattgtacccaatgccctaaatttaaaatcccccacggaattagctaccctcaatctggctctaaatcaagaaattaaagaaaggcaaacagcggaaatagcattgcaggagttaaacaataatcttgaaaaaagagtggaagaccgcactacccaattagcaaaaataaatcaacaattagaacaggaaattgaagataaaacccgggcaaaagaagatctcgaaaaaaataaagatcaattggcgcaattggctgctattgtcgaatcttcccaggacgcaattattagtaaaaccctagatggtaacatcaccagttggaacgagtctgcggaaagattatttggctacacagcagaagaaatgattggaagtcatatcaccaaacttattcctgaggaattaatcttggaagaagaccttattgctgaatgcatccgccaaggtcagagaattaacacctacgaaactcaaagacagcgtaaagatggtactaaaattgatgttgccctgaccatttctcccattcgagatgaacacaaaaatgtagtgggagcctccaaaattgttagggatattaccgccagattggatgtggaaaatgccctacgggaaagtcaatattttattgaaaaattagctaattattctccccagattctttatattttagaccccattgcttggaaaaatatttatgtcaattatcaatccttcgaaatcctaggctacactccagaagaatttaaaaatgggggaacggagctgttgttaaatattgtgcatcccgatgacatcccaaccctttacgaaaataagaatttttggcaaaagtcccaggaaggccaagtgttgaccactgaatatcgaatgcgccacaaaaatggttcttggcggtggctacgttctcgggaagtggtttttgctagggatgattatgggcaagttactaaggttttgggcacagcccaggatattagtgatagcaaagaacaggaacaaagactttatgagcaaggccgccgcgaatcattattaagggaaattacccagcgtatccgtcagtctttagatctgccaactatttttaacacagtagtgcaggaaattcgtcagtttttggaagcagatcgggtagttatttttcagttttcacccgactctgacttttccgttggtaatattgtggcagagtcggtattggctccatttaagccaatcattaatagtgcaattgaagaaacttgttttagtaataactatgcccaaaggtatcagcagggcagaatccaggtcattgaggatattcaccagtcccatcttaggcaatgccacattgactttcttgccaggctacaggtcagggcaaacctagtgctaccactaattaatgatgccattttgtggggcttattgtgtattcatcaatgtgacagttctcgagtttgggaacaaacagaaattgatctgctcaagcagatcactaatcagtttgaaattgccatccaacaggctactttgtacgagcaggctcaacaagaattggcttctaaaaatcagctttttgtacaattaaccaacgaattagagcaaaaaaaagtattgcttaaggaaattcatcatcgagttaaaaacaatttgcaaattatgtctagtttactttatttgcaatttagtaaggcttctccagccatccagcaattgagtgaggaataccagaatcgcattcaatccatggcattgattcatgagcagttatatcgtagtgaagacttagctaatattgattttagtcaatatcttaaaaatttgactcacaatatctgccaaagttacggctgtaatactgatagtattaaaattaaattgttggttgaacaagttaaagttcctttagagcagtccattcctttgggattaattattcaggaattagtttccaatgctttaaaacatgctttcccaacgacggaaggggaaatttcgattaaattcacttcaatgaacagtcactatagtttacaggtgtgggataacggagttggaatttccagggatatagatttggaaaatacagatagtttgggcatgcaacttatctacagcctaactgaacaactccagggagaattgcactatgaatatgtcggtggcgctcaatttgggttggaattttcactttaa
BBa_K322122_sequence
1
tttacggctagctcagtcctaggtattatgctagctactagagtcacacaggaaaggtgcacatggaagaggaaatggcaaaatttaaggaccatcccatcctcagccacatttacttccccgaactcaaccgcaaacaaagcctagagcaagacctgcaattctattacggctccaactggcggcaagaagtgaaaatttctgccgctggccaagcctatgtggaccgagtccggcaagtggccgctacggcccctgaattgttggtggcccattcctacacccgttacctgggggatctttccggcggtcaaattctcaagaaaattgcccaaaatgccatgaatctccacgatggtggcacagctttctatgaatttgccgacattgatgacgaaaaggcttttaaaaatacctaccgtcaagctatgaatgatctgcccattgaccaagccaccgccgaacggattgtggatgaagccaatgacgcctttgccatgaacatgaaaatgttcaacgaacttgaaggcaacctgatcaaggcgatcggcattatggtgttcaacagcctcacccgtcgccgcagtcaaggcagcaccgaagttggcctcgccacctccgaaggctagttaaagaggagaaaggatccatggccgtcactgatttaagtttgaccaattcttccctgatgcctacgttgaacccgatgattcaacagttggccctggcgatcgccgctagttggcaaagtttacccctcaagccctatcaattgccggaggatttgggctacgtagaaggccgcctggaaggggaaaagttagtgattgaaaatcggtgctaccaaacgccccagtttcgcaaaatgcatttggagttggccaaggtgggcaaagggttggatattctccactgtgtaatgtttcctgagcctttatacggtctacctttgtttggctgtgacattgtggccggccccggtggagtaagtgcggctattgcggatctatcccccacccaaagcgatcgccaattgcccgcagcgtaccaaaaatcattggcagagctaggccagccagaatttgagcaacaacgggaattgcccccctggggagaaatattttctgaatattgtttattcatccgtcccagcaatgtcactgaagaagaaagatttgtacaaagggtagtggactttttgcaaattcattgtcaccaatccatcgttgccgaacccttgtctgaagctcaaactttggagcaccgtcaggggcaaattcattactgccaacaacaacagaaaaatgataaaacccgtcgggtactggaaaaagcttttggggaagcttgggcggaacggtatatgagccaagtcttatttgatgttatccaataaggtaccccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z