BBa_K176043
1
VR9 bindin
Reverse primer VR9 (K176053) binding site
2009-08-12T11:00:00Z
2015-05-08T01:11:02Z
Reverse complement of VR9 (K176053). Picked from random sequences.
This part can be ligated into composite parts as a primer binding site for PCR identification of the part or sequencing of the part. It will be very useful when many composite parts have similar lengths, then PCR using VF2 and VR cannot be used to identify the parts.
Reverse primers VR3~VR12 are designed with our software tool, which is modified from primer3 to pick primers from random sequences for synthetic biological primer design. These primers are designed to be perfectly paired with VF2 and without cross-reactivities to each other.
false
false
_282_
0
3908
9
It's complicated
true
Designed with our software tool, which is modified from primer3 to pick primers from random sequences for synthetic biological primer design.
false
Jiayi Dou, Hao Jiang
annotation2017247
1
VR9
range2017247
1
1
20
BBa_K176008
1
pCon 0.15
constitutive promoter family member J23115 actual sequence (pCon 0.15)
2009-06-16T11:00:00Z
2015-05-08T01:11:01Z
J23115
Released HQ 2013
The sequence of J23115 is wrong according to sequencing result of the registry and ours. This part K176008 is created for the actual promoter.
http://partsregistry.org/cgi/sequencing/one_blast.cgi?id=3647
http://partsregistry.org/cgi/sequencing/one_blast.cgi?id=1209
J23115:
tttatagctagctcagCcctTggtacaatgctagc
K176008:
tttatagctagctcagTcctAggtacaatgctagc
false
true
_282_
0
3908
9
In stock
true
This is the actual sequence of J23115.
false
Hao Jiang, Danqian Liu, Chao Li
annotation2005561
1
c in J23115
range2005561
1
17
17
annotation2005560
1
-10
range2005560
1
24
29
annotation2005563
1
NheI
range2005563
1
7
12
annotation2005564
1
NheI
range2005564
1
30
35
annotation2005565
1
AvrII
range2005565
1
18
23
annotation2005562
1
t in J23115
range2005562
1
21
21
annotation2005559
1
-35
range2005559
1
1
6
BBa_K176103
1
BBa_K176103
constitutive promoter family member K176008 (pCon 0.15) with primer VR9 site
2009-09-05T11:00:00Z
2015-05-08T01:11:03Z
K176043 K176008
VR9 binding site + pCon 0.15
false
false
_282_
0
3908
9
It's complicated
true
VR9 binding site + pCon 0.15
false
Jiayi Dou, Hao Jiang
component2018799
1
BBa_K176008
component2018791
1
BBa_K176043
annotation2018791
1
BBa_K176043
range2018791
1
1
20
annotation2018799
1
BBa_K176008
range2018799
1
29
63
BBa_K176103_sequence
1
gatgaggctacgtgctttcttactagagtttatagctagctcagtcctaggtacaatgctagc
BBa_K176043_sequence
1
gatgaggctacgtgctttct
BBa_K176008_sequence
1
tttatagctagctcagtcctaggtacaatgctagc
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z