BBa_K1773023
1
BBa_K1773023
Cascade with pLux/cI right promoter and Medium RBS
2015-08-26T11:00:00Z
2015-08-27T02:08:24Z
Cascade complex was cloned form Aggregatibacter actinomycetemcomitans D-7S strain.
I-F type Cascade complex of I-F type CRISPR-Cas system. The Cascade complex is comprised of five proteins : Csy1, Csy2, Csy3 and Cas6f and an crRNA molecule. The Cascade complex distinguishes target DNA , and recruits Cas3 (BBa_K1773003) protein, which degrades the target DNA.
false
false
_2195_
27269
27269
9
false
no
false
Sarunas Tumas
component2438483
1
BBa_K1773017
component2438484
1
BBa_K1773005
annotation2438484
1
BBa_K1773005
range2438484
1
100
3997
annotation2438483
1
BBa_K1773017
range2438483
1
1
91
BBa_B0032
1
BBa_B0032
RBS.3 (medium) -- derivative of BBa_0030
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
Weak1 RBS based on Ron Weiss thesis. Strength is considered relative to <bb_part>BBa_B0030</bb_part>, <bb_part>BBa_B0031</bb_part>, <bb_part>BBa_B0033</bb_part>.
false
true
_41_44_48_46_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix ("RBS-2" in figure 4-14 of thesis). <P>
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation1710
1
RBS
range1710
1
7
10
annotation1709
1
RBS-3\Weak
range1709
1
1
13
annotation7027
1
BBa_B0032
range7027
1
1
13
BBa_K1773017
1
BBa_K1773017
pLux/cI right promoter with medium RBS
2015-08-25T11:00:00Z
2015-08-26T02:05:21Z
From parts registry
pLux/cI right promoter with medium RBS.
false
false
_2195_
27269
27269
9
false
assembled with oligonucleotide primers
false
Sarunas Tumas
component2437997
1
BBa_K1773015
component2437999
1
BBa_B0032
annotation2437997
1
BBa_K1773015
range2437997
1
1
78
annotation2437999
1
BBa_B0032
range2437999
1
79
91
BBa_K1773005
1
BBa_K1773005
I-F type CRISPR-Cas Cascade complex
2015-06-29T11:00:00Z
2015-09-10T12:26:44Z
Aggregatibacter actinomycetemcomitans D-7S
I-F type CRISPR-Cas Cascade complex mutated for biobrick assembly.
false
false
_2195_
27269
27269
9
false
no
false
Sarunas Tumas
BBa_K1773015
1
BBa_K1773015
pLux/ci lambda promoter with 10bp at 3' end for RBS attachment
2015-08-24T11:00:00Z
2015-08-25T05:56:07Z
no
pLux/ci lambda promoter with 10bp at 3' end for RBS attachment. It is a hipothetical part for assembling pLux/cI+RBS biobricks
false
false
_2195_
27269
27269
9
false
no
false
Sarunas Tumas
BBa_K1773017_sequence
1
acctgtaggatcgtacaggtttacgcaagaaaatggtttgttatagtcgaatacctctggcggtgatacacatgcatatcacacaggaaag
BBa_B0032_sequence
1
tcacacaggaaag
BBa_K1773023_sequence
1
acctgtaggatcgtacaggtttacgcaagaaaatggtttgttatagtcgaatacctctggcggtgatacacatgcatatcacacaggaaagtactagagcatgataactaaaacaacagtagtaaaagccattcaacaatttcttgttgatcaaaatctaaagaaatccggaaccgatagaaagaaactagaaaatgcctctctttcagaatcagaaaaagaagcattattgaaaaaaatcgccgagtatgatgaaaaataccgttttgatgtttgggttgaaaatgccgctacggtaatggcaaagcagttgtatttcggtacgcacatttcccgtggaatccactcttcctcaaaaggtgataatgttaattttcaatctgatttgacgctttccgatacacttgtcggttcgcaatcaatacctaagttagaacttgatgcaaacgggaatgcggctgcgcttcccttagccggtttctttaatattattgttgatgaggaaaaaaatacgacacttaaagaattgttacttaatgacgattcttgccttgaaggctgtttcgctgatgatcctgaattatccaagcaatataagatttgctttcaaaatgcattaaaaggggatttaacaaaaccgagaaccgacgagcgtaataaacaactcctatgggcaaataatttcgattctggaaagaatgcttatatttgcctaattcccttgtatccgtcctcattaaccagtcatttttaccataaaattaatcaattgcgttattctgactataacaagcaatcatcatccaatcgctataaaaaagatgtatcgcaacttccttatgtatcattacaaaatataggggtaactgtgttgggcggaacaaagccacagaatgtcagccaacttaccagtaaccaagggggacggaattatttgcttccttcacttccgcctatttttaaatctcaagaaaaaatacgtttaactcaaaaacaaaccaccatttttaatcgtcgtttggcttatgcttgtcgtgaaggattaaatatgctgtatgaagtcgttgaagcagaaaaaaatatttatccggaaagagataaacgtaaattggcgttagagttgattgctcacactgttttaatgcaagcgaagtacattcaaaataactcccctacaggttggagcaaagactatcaccttaatgaatatcaaaaatattggcttgatccacaccgtgcagaactggatggcgaagataattttagacataacattgagcaaaaccattggaccgccgaaattatccgtcaatttgcactttgggttaatgcttgccttaaatggcgttttaaatctattcaacaggattttactacacctgaatataaccaatggtgcagagaaatggaaaaagccattgctgcacaagcccggttaagtcaataaggatcaaatatgaacactgatttctatttacttttcaagcatattaaaatccagtccgccaatgcgatttcaggtcctttaagctatggttttcctgccgttagcggctttgtcggtgcgatacatgcgttaagtcgtaagctaaatgaaaaagccatgttagatggtgtaacaattgcttgccataactatgatttacaggcttaccaatccacaccattttccgaccgcacttttatccagacccgtaatccgctaaagaaaaacggtgaaacggctcccatcatcgaggaagggaaagtgcatttggatatttctctggtcattgaactacatatttccgataagatgctatcccatcaagttgaaaataatttgaattgtgatgaggccaaaattttcttatccgaatgtaaaaaccttctcttaaaacaacgtattgccggcggttctgtattgagtattgaagatgttcaattgcactaccttgaagatgagtggaaaattaaaaggcaactcctccccggctttgtgttaatgaatgcgcaagcggaactgattaaaattacggaagaattgcaacaaggccttaagcaaggcgattttgttgtattagaagccaaccctgatgcaaccgccttcgatgccttaatcgaaacagcaattttgcaccatattccgaatcatcctcacgccaaaacgaacgaatggcaaacttacagcattaaacaaggaagaggctggcttgtgccgattccggtggggtatcaagccatttctcccctatttgaagcaggacaattacaacattgccgtacgcaggattatccaagtcaatatgtggaaaccctatatagtttgggtaaatgggtttcaccactcaacctgcccgaagatttatcccgctgtttttggcgttataccgaacctaaaaataatttatacctcatttcacaaggagaccaataatgagaaaattaaccacaccaaccgtattagcttttgaacgtaatttagatatttccgatgctgtttttacgcaatttaacagccaagataaaaatcccgttgaagaagaagtcaagatccgtgaaaagtctgttcgcggaacaatttctaatcgtcttaaaaatacgattacgaatgatccgacaaaattagatgctgaaattcaaaaacctaatttacaacgcgttgatgttgctacattaaatgataaaaacgatatattggttgcccgtttcacctgtaaagttttaccgtttgatggcaaaccttgcgtatgtaacgatcaagactaccaaagcaaaattattggcgtcgttgaaagctacattaaaacacaaggcttctccgaattagccaaacgctatgccacaaatatcgctaatgcacgctggttatggcgcaatcgcatgagtgcggaaacgatcaaaattgaagtgtcatttaacggtgaaacgctgacttttgataatgccaaagcgctttcgctcaatactttcgacgattcttctacgcaacttcaggttcttaccgggcatattgaagacggactgagcggaaaacatttcgtgattttaaatatcaccgcttatgtcaaaatgggttacggacaagaagtttatccttcccaagaactcgtgctggatgcgggagctaataaccgtaaaagtaaggtgctttataagcttgatgatagtggcaaagcagcaatgcactcacaaaaagtcagcaatgccattcgcaccattgatacatggtataaatcaaatgccgagtttccaattgcaaccgaaccttatggcgcagtaaccacgctcggtaccgctttccgccaaccaaaagaaaaattagatttttatacattgttcgataattggctcctaaacgacaaggtccctgatgttgaacagcagcattatgtgatgagcgtgttaatccgcggcggtgtatttggcgcaagcggtaaggaatagccatgacagtgcaaacccattacattgaaatcaaggcgattccgcaagtggacatgttacaaacggaagtcatcggcttctgtttgcaaaaactccaccaaatcctaccgcactttgaaggtaggattgggctcgcctttcccgcctacggcaacgacaaaaccttgggcggcattattcgcctgtttggcacggaaaatgattgcggttttattcattttaaactgcaatcactgcgggattatgcccttatcagcgaagtcatgccaattccagaaaaagtcagaagttaccgcatttatcagcgtattcagcctaagggacaaagttccattcgacgtgcagaaaaacgcctgacagcacaaggaaaatggaatgaggaagttctacaaaatatgttgcagaaacaagcgacacagcgaatctacccacatgctcatttgaaaagtagcagtacaaaacagcaatttattttagcgatcaaatccgtgcatcaaacaaaagccgttgaaggggtgtttagtgcttacggattaagtcaaactacaaccgttccacatttctaattaat
BBa_K1773005_sequence
1
catgataactaaaacaacagtagtaaaagccattcaacaatttcttgttgatcaaaatctaaagaaatccggaaccgatagaaagaaactagaaaatgcctctctttcagaatcagaaaaagaagcattattgaaaaaaatcgccgagtatgatgaaaaataccgttttgatgtttgggttgaaaatgccgctacggtaatggcaaagcagttgtatttcggtacgcacatttcccgtggaatccactcttcctcaaaaggtgataatgttaattttcaatctgatttgacgctttccgatacacttgtcggttcgcaatcaatacctaagttagaacttgatgcaaacgggaatgcggctgcgcttcccttagccggtttctttaatattattgttgatgaggaaaaaaatacgacacttaaagaattgttacttaatgacgattcttgccttgaaggctgtttcgctgatgatcctgaattatccaagcaatataagatttgctttcaaaatgcattaaaaggggatttaacaaaaccgagaaccgacgagcgtaataaacaactcctatgggcaaataatttcgattctggaaagaatgcttatatttgcctaattcccttgtatccgtcctcattaaccagtcatttttaccataaaattaatcaattgcgttattctgactataacaagcaatcatcatccaatcgctataaaaaagatgtatcgcaacttccttatgtatcattacaaaatataggggtaactgtgttgggcggaacaaagccacagaatgtcagccaacttaccagtaaccaagggggacggaattatttgcttccttcacttccgcctatttttaaatctcaagaaaaaatacgtttaactcaaaaacaaaccaccatttttaatcgtcgtttggcttatgcttgtcgtgaaggattaaatatgctgtatgaagtcgttgaagcagaaaaaaatatttatccggaaagagataaacgtaaattggcgttagagttgattgctcacactgttttaatgcaagcgaagtacattcaaaataactcccctacaggttggagcaaagactatcaccttaatgaatatcaaaaatattggcttgatccacaccgtgcagaactggatggcgaagataattttagacataacattgagcaaaaccattggaccgccgaaattatccgtcaatttgcactttgggttaatgcttgccttaaatggcgttttaaatctattcaacaggattttactacacctgaatataaccaatggtgcagagaaatggaaaaagccattgctgcacaagcccggttaagtcaataaggatcaaatatgaacactgatttctatttacttttcaagcatattaaaatccagtccgccaatgcgatttcaggtcctttaagctatggttttcctgccgttagcggctttgtcggtgcgatacatgcgttaagtcgtaagctaaatgaaaaagccatgttagatggtgtaacaattgcttgccataactatgatttacaggcttaccaatccacaccattttccgaccgcacttttatccagacccgtaatccgctaaagaaaaacggtgaaacggctcccatcatcgaggaagggaaagtgcatttggatatttctctggtcattgaactacatatttccgataagatgctatcccatcaagttgaaaataatttgaattgtgatgaggccaaaattttcttatccgaatgtaaaaaccttctcttaaaacaacgtattgccggcggttctgtattgagtattgaagatgttcaattgcactaccttgaagatgagtggaaaattaaaaggcaactcctccccggctttgtgttaatgaatgcgcaagcggaactgattaaaattacggaagaattgcaacaaggccttaagcaaggcgattttgttgtattagaagccaaccctgatgcaaccgccttcgatgccttaatcgaaacagcaattttgcaccatattccgaatcatcctcacgccaaaacgaacgaatggcaaacttacagcattaaacaaggaagaggctggcttgtgccgattccggtggggtatcaagccatttctcccctatttgaagcaggacaattacaacattgccgtacgcaggattatccaagtcaatatgtggaaaccctatatagtttgggtaaatgggtttcaccactcaacctgcccgaagatttatcccgctgtttttggcgttataccgaacctaaaaataatttatacctcatttcacaaggagaccaataatgagaaaattaaccacaccaaccgtattagcttttgaacgtaatttagatatttccgatgctgtttttacgcaatttaacagccaagataaaaatcccgttgaagaagaagtcaagatccgtgaaaagtctgttcgcggaacaatttctaatcgtcttaaaaatacgattacgaatgatccgacaaaattagatgctgaaattcaaaaacctaatttacaacgcgttgatgttgctacattaaatgataaaaacgatatattggttgcccgtttcacctgtaaagttttaccgtttgatggcaaaccttgcgtatgtaacgatcaagactaccaaagcaaaattattggcgtcgttgaaagctacattaaaacacaaggcttctccgaattagccaaacgctatgccacaaatatcgctaatgcacgctggttatggcgcaatcgcatgagtgcggaaacgatcaaaattgaagtgtcatttaacggtgaaacgctgacttttgataatgccaaagcgctttcgctcaatactttcgacgattcttctacgcaacttcaggttcttaccgggcatattgaagacggactgagcggaaaacatttcgtgattttaaatatcaccgcttatgtcaaaatgggttacggacaagaagtttatccttcccaagaactcgtgctggatgcgggagctaataaccgtaaaagtaaggtgctttataagcttgatgatagtggcaaagcagcaatgcactcacaaaaagtcagcaatgccattcgcaccattgatacatggtataaatcaaatgccgagtttccaattgcaaccgaaccttatggcgcagtaaccacgctcggtaccgctttccgccaaccaaaagaaaaattagatttttatacattgttcgataattggctcctaaacgacaaggtccctgatgttgaacagcagcattatgtgatgagcgtgttaatccgcggcggtgtatttggcgcaagcggtaaggaatagccatgacagtgcaaacccattacattgaaatcaaggcgattccgcaagtggacatgttacaaacggaagtcatcggcttctgtttgcaaaaactccaccaaatcctaccgcactttgaaggtaggattgggctcgcctttcccgcctacggcaacgacaaaaccttgggcggcattattcgcctgtttggcacggaaaatgattgcggttttattcattttaaactgcaatcactgcgggattatgcccttatcagcgaagtcatgccaattccagaaaaagtcagaagttaccgcatttatcagcgtattcagcctaagggacaaagttccattcgacgtgcagaaaaacgcctgacagcacaaggaaaatggaatgaggaagttctacaaaatatgttgcagaaacaagcgacacagcgaatctacccacatgctcatttgaaaagtagcagtacaaaacagcaatttattttagcgatcaaatccgtgcatcaaacaaaagccgttgaaggggtgtttagtgcttacggattaagtcaaactacaaccgttccacatttctaattaat
BBa_K1773015_sequence
1
acctgtaggatcgtacaggtttacgcaagaaaatggtttgttatagtcgaatacctctggcggtgatacacatgcata
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z