BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_B0012
1
BBa_B0012
TE from coliphageT7
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>.
Released HQ 2013
Transcription terminator for the <i>E.coli</i> RNA polymerase.
false
false
_1_
0
24
7
In stock
false
<P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator.
false
Reshma Shetty
annotation1686
1
T7 TE
range1686
1
8
27
annotation7020
1
BBa_B0012
range7020
1
1
41
annotation1687
1
stop
range1687
1
34
34
annotation1690
1
polya
range1690
1
28
41
BBa_K1809038
1
BBa_K1809038
Const. Promoter-RBS-PpAFP-DT
2015-09-02T11:00:00Z
2015-09-03T02:55:18Z
Composite of parts BBa_J23119 and BBa_K1809041
This part contains the constitutive promoter BBa_J23119, an RBS, Pseudemonas putida antifreeze protein (PpAFP), and a double terminator. It produces a high level of expression of the antifreeze protein.
false
false
_2234_
24831
24831
9
false
Used a strong promoter to produce high levels of expression of PpAFP.
false
David Morgan
component2443216
1
BBa_B0010
component2443218
1
BBa_B0012
component2443212
1
BBa_J23119
component2443214
1
BBa_B0034
annotation2443218
1
BBa_B0012
range2443218
1
1580
1620
annotation2443212
1
BBa_J23119
range2443212
1
1
35
annotation2443216
1
BBa_B0010
range2443216
1
1492
1571
annotation2443214
1
BBa_B0034
range2443214
1
44
55
BBa_J23119
1
BBa_J23119
constitutive promoter family member
2006-08-23T11:00:00Z
2015-08-31T04:08:40Z
Overlap extension of synthetic oligonucleotides
Released HQ 2013
Later
false
true
_52_
0
483
95
In stock
false
N/A
true
John Anderson
BBa_B0010
1
BBa_B0010
T1 from E. coli rrnB
2003-11-19T12:00:00Z
2015-08-31T04:07:20Z
Transcriptional terminator consisting of a 64 bp stem-loop.
false
false
_1_
0
24
7
In stock
false
true
Randy Rettberg
annotation7018
1
BBa_B0010
range7018
1
1
80
annotation4184
1
stem_loop
range4184
1
12
55
BBa_B0010_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc
BBa_B0034_sequence
1
aaagaggagaaa
BBa_K1809038_sequence
1
ttgacagctagctcagtcctaggtataatgctagctactagagaaagaggagaaatactagatgcagtatgattccccgattaccaacactgagttccaaaccttcctgacaacgtcatcgattagcgacgatacagcggcggcgatttccactctcttgaacctggactcggcggatactattaatctggcctcatgggatggcgtcaacgcgccggagattccgacaggccaggaaggcgcagcggacgtggtgatcgtgaacgtacctggcgcggccaccgatctggtacccgtagaaattcctgattcattaaatagtgcaaaagcgtttatcttcgattcaaatgcctctctggcggtcacctttgatgctccagtagcggcagaatcggcttcattagcccgcgttgccgcggatacaacagccggcatcgaatttctggttacgaccggtgcgggtaacgatgtcattactgtaaatggggatcagaatagctatattgatgccggcaacgggaatgacactattgttacgggcaacggtaacaacacagtggttgctggtgccgggaacaacaatgtgaccacgggtaccggcaacgacacgatcattctgtccgggacgggccacaccgacattgtgaacactggcgctggctatgatgtggttcaattggatgggagcgctgcggactacaccatcaccgctggtaattcaaacaacgtgactctgaccggcgcccagaccgccgccatcacgggtgcggaatttctcacttttgcagacggctcatcagtggcgctggcgcagagcgaggctgaagccagtgccctgcgcttatatgaaggaattttgggccgtgacgcggatcaggggggcgctcagaacttcattgcacaagtcgaagcaggcacagcgctgacggatatcgcgaatagttttttgaactcagccgagttcggcggtgcagcaacggaagcgtccatcgatagtctttatacttctttacttggccgtggcgcagatactgcgggcagcgatagttgggaagcaatcatcgcaaacggcggttcactcgccgacgttgccgcaggcattgctgggagcgcggaagcgcaagaacaggatcagagtaatggcacattcgtggacagcctctatctgaacgcattgggccgcccctcagatgaggcgggtcacgatgcgtgggttgcccagctgttcaatggcgcaagccgtgcagaggtggcggcgggcattgttgggtcggcggaggcagcagagaagattaatagcgattttattgatgctctgtatctcagcgctactggccgcgcgagtgacgaagcgggaaaggctggctggaccgaagttctggcaaatgggggtacgcaggccgacgtggccattggaattgtaggttctcaggaagcgattgcgcataatgataacgttgtcgtccttcatggcgccgtgtgatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_B0012_sequence
1
tcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_J23119_sequence
1
ttgacagctagctcagtcctaggtataatgctagc
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z