BBa_K1824000
1
BBa_K1824000
Constitutive Promoter J23119 + RNA Thermometer A1
2015-09-03T11:00:00Z
2015-09-17T07:16:43Z
J23119 was from the Registry, and A1 was from BIT-CHINA.
This was a composite regulatory part that consisting of constitutive promoter J23119 and RNA Thermometer A1 for temperature induced gene expression at 42 degrees. A1 was derived from ROSE family (ROSE stands for Repression Of heat Shock gene Expression), first discovered in the 5′ untranslated region of rhizobial heat shock genes (Nocker, 2001). The possible secondary structure of A1 was simulated by RNAstructure (Fig.1). This combination was compatible with the assembly method that XJTLU-CHINA promoted.
false
false
_2250_
25787
25962
9
false
The transcription of promoters always came with redundancy, which means the last few nucleic acids of the promoter can also be transcribed. it is important to make sure that those redundant sequences do not interact with RNA thermometers.
false
Wenbo Xu, Hao Wu
component2443727
1
BBa_J23119
component2443728
1
BBa_K1824556
annotation2443728
1
BBa_K1824556
range2443728
1
36
77
annotation2443727
1
BBa_J23119
range2443727
1
1
35
BBa_J23119
1
BBa_J23119
constitutive promoter family member
2006-08-23T11:00:00Z
2015-08-31T04:08:40Z
Overlap extension of synthetic oligonucleotides
Released HQ 2013
Later
false
true
_52_
0
483
95
In stock
false
N/A
true
John Anderson
BBa_K1824556
1
BBa_K1824556
RNA Thermometer A1 (Specially designed for J23119)
2015-09-03T11:00:00Z
2015-09-05T05:40:08Z
the DNA sequence of A1 was from BIT-CHINA.
A1 RNA thermometer was derived from the ROSE family (ROSE stands for Repression Of heat Shock gene Expression), first discovered in the 5′ untranslated region of rhizobial heat shock genes (Nocker, 2001). The possible secondary structure of A1 was simulated by RNAstructure (Fig.1). For testing results of A1 RNAT, See below.
false
false
_2250_
25962
25962
9
false
To maintain the secondary structure of RNA thermometers, researchers need to be careful with of the use of any parts that couple with it. For instance, in some cases, part of operator region can be transcribed into RNAs and form tight secondary structure and thus interfere RNA thermometers.
false
Wenbo Xu
BBa_K1824000_sequence
1
ttgacagctagctcagtcctaggtataatgctagctactagagctctttaaaaaaaaaaagtactaaggagtactag
BBa_K1824556_sequence
1
acagagaacatactagagctctttaaaaaaaaaaagtactaaggagtactag
BBa_J23119_sequence
1
ttgacagctagctcagtcctaggtataatgctagc
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z