BBa_K1842003
1
BBa_K1842003
LuxCDEE
2015-08-16T11:00:00Z
2015-08-17T06:32:01Z
Each of the genes used was derived from the marine bioluminescent bacterium Photobacterium Phosphoreum.
The part codes for the fatty acid reductase complex of the bacterial lux system from Photobacterium Phosphoreum. The system recruits fatty acids and converts them into aldehyde to be used as substrate in the system's light producing reaction. The genes coding for each subunit of the complex are separated by a P2A sequence for stoichiometric expression. The part is comprised of three unique genes - LuxC, LuxD, and LuxE, coding for a reductase, transferase, and synthetase, respectively. Each gene has an attached antibody tag - LuxC has a FLAG tag, LuxD has a V5 tag, and LuxE has a HA tag. A duplicate copy of LuxE is present, resulting in its overexpression. Genes used are codon optimized for expression in yeast.
false
false
_2268_
26185
26185
9
false
The coding sequence was too large to be synthesized in one piece, so it was instead synthesized in a series of fragments that were assembled via Gibson Assembly.
false
Walter Thavarajah
annotation2435945
1
FLAG
range2435945
1
1435
1458
annotation2435961
1
LuxD
range2435961
1
1525
2442
annotation2435962
1
V5
range2435962
1
2443
2484
annotation2435983
1
Stop x2
range2435983
1
4921
4926
annotation2435946
1
P2A Linker
range2435946
1
1459
1524
annotation2435963
1
P2A Linker
range2435963
1
2485
2550
annotation2435979
1
HA
range2435979
1
3670
3702
annotation2435944
1
LuxC
range2435944
1
1
1434
annotation2435981
1
LuxE (duplicate)
range2435981
1
3769
4887
annotation2435982
1
HA
range2435982
1
4888
4920
annotation2435964
1
LuxE
range2435964
1
2551
3669
annotation2435980
1
P2A Linker
range2435980
1
3703
3768
BBa_K1842003_sequence
1
atgatcaagaagatcccaatgatcattggtggtggtgaaagagatacttccgaacacgaataccgtgaattgaccttgaactcctacaaggtctctatcccaatcatcaaccaagatgatgttgaagccatcaagtcccaaaacgtcgaaaacaacttgaacattaaccaaattgttaacttcttgtacactgtcggtcaaaagtggaagtccgaaaactactcaagaagattgacctacatcagagacttggtcagatttttgggttactccccagaaatggctaagttggaagccaactggatctctatgattttgtcttccaagtctgccttgtacgacatcgtcgaaactgaattaggttctcgtcacattgtcgacgaatggttgccacaaggtgattgttacgttaaagctatgcctaagggtaagtccgtccacttgttggctggtaacgtcccattgtccggtgttacctctatcatcagagctatcttgaccaagaacgaatgtatcatcaagacctcctctgctgatccattcaccgccattgctttggcctcttccttcatcgatactgacgaacaccacccaatttccagatctatgtccgtcatgtactggtcccacaacgaagatatcgctattccacaacaaatcatgaactgtgctgatgttgtcgtctcctggggtggttacgacgccatcaagtgggctaccgaacataccccagttaacgtcgacattttgaaattcggtccaaagaaatctatcgctatcgttgataacccagtcgacatcaccgcttctgctatcggtgtcgctcacgatatttgtttctacgatcaacaagcctgtttctctactcaagacatctactacattggtgacaacatcgacgctttcttcgacgaattggtcgaacaattgaacttgtacatggacatcctacctaaaggtgatcaaaccttcgacgaaaaggcttccttctctttgattgaaaaggaatgtcaattcgctaagtataaggttgaaaagggtgataaccaatcctggttgttggtcaagtccccattaggttctttcggtaaccaaccattggctagatccgcctacatccaccacgtttctgacatttccgaaatcactccatacatcgaaaacagaatcacccaaaccgttaccgttactccatgggaatcctctttcaaataccgtgatgtcttggcttctcacggtgctgaaagaatcgtcgaatccggtatgaacaacatcttcagagtcggtggtgctcacgacggtatgcgtccattgcaaagattggttaagtacatctctcatgaaagaccatacacctacactactaaggacgtcgccgttaagatcgaacaaaccagatacttggaagaagataagttcttggtcttcgtccctgattacaaagacgatgacgacaaaggtagcggtgctaccaacttctctttgttgaagcaagccggtgacgttgaagaaaacccaggcccaatgaagtccgaaaacaactctgtcccaatcgaccacgtcatcaaagttgacaacgaaagacacattagagtctgggaaaccttcccaaagaaccaatgtgataagagaaataacactatcgttatcgcttccggtttcgctagaagaatggatcacttcgccggtttggctgaatacttgtccactaacggtttccacgtcattagatacgactccttgaaccacgttggtttgtcttccggtgaaatcgaccaattctctatgtctgtcggtaagaagtctttgttgactgttattgattggttaaagtctgaacacggtatcgaccaagtcggtttaattgcttcctccttgtctgctagaattgcctatgacatcgtcgctgatgtcaacttgtctttcttgatcaccgctgtcggtgttgtcaacttgagaaacactttggaacaagctttgaagtacgactacttgcaaatggaaatcgatgaaattccagaagatttggatttcgacggttacaacttgggttccaaggtcttcgttactgattgtttcgaaaacaactgggacaccttggattccactatcaacaagactaagaacttgaacgtcccattcattgctttcgtcgccaacgacgactcctgggttcaacaacacgaagttgaagaattgatgtccaacatcaactctgacaagactaagatttactctttaatcggttcctctcacgatttaggcgaaaacttgattgtcttgagaaacttctaccaatccatcaccaaggctgctattgccttggactctaacttggtcggtttggttagcgaaatcatcgaaccacaattcgaagctttgactattgctaccgtcaacgaaagaagattgaagaacaagatccaatctaagtccttggctggtaagccaattccaaacccattgttgggtttagattccactggttcaggagctactaatttctcattgttaaagcaggctggagacgtcgaagagaatcctggtcctatgactattactttagacacctgtgaaaaggacatcatcgttagcactgaaatcgatgatattattttcacctcctctccattggacatcacttacgacgaacaagaaagaattaagcacaaattgatcttggaatccttcagataccactacaacaacaacgaagattacaagtctttctgtaacactcaaggtgtcgacgaaaacatttcctccttggacgacatcccagtctttccaacctccatgttcaagtacgctaagatctgtaccgctgatgaatctaacattgaaaactggttcacttcctccggtacctccggtgttaagtctcatatcgccagagacagagtctccatcgaacgtttgttgggttccgttaactacggtatgaagtacttgggttctttccacgaaaaccaattggaattggttaacatgggtccagacagattcaacgctaaaaacgtctggttcaagtacgttatgagcttggtcgagttattgtacccaaccactttcaccgttaacaacgacgaaatcgactttgaattgactatcaagtccttgaaggaaatctacaacaagggtaagggtatttgtttaatcggtccaccatacttcatttacttgttgtgtcaatacatgaaggaaaacgacatcgaatttaacgccggtaacagaatcttcatcatcaccggtggtggttggaagactaagcaaaagcaagctttaaatagacaagatttcaaccaattgttaatggaaaccttccatttggctcacgaatctcaaatcagagatactttcaaccaagtcgaattgaacacttgtttcttcgaagacaacagacaaagaaagcacgtcccaccatgggtctacgctagagctttggacccagtcaccttaaagcctgttgaagatggtcaagaaggtttaatttcctacatggacgcctcttccacctcttacccaactttcatcgtcactgacgatatcggtatcattcacactatcaaggatccagacccatatcaaggtaccactattgacatcgtcagaagattgaacaccagagaacaaaagggttgttccctatctatggcttccggtttgaaaatggcttacccatacgatgtcccagactacgctggtagcggtgctaccaacttctctttgttgaagcaagccggtgacgttgaagaaaacccaggcccaatgactattactttagacacctgtgaaaaggacatcatcgttagcactgaaatcgatgatattattttcacctcctctccattggacatcacttacgacgaacaagaaagaattaagcacaaattgatcttggaatccttcagataccactacaacaacaacgaagattacaagtctttctgtaacactcaaggtgtcgacgaaaacatttcctccttggacgacatcccagtctttccaacctccatgttcaagtacgctaagatctgtaccgctgatgaatctaacattgaaaactggttcacttcctccggtacctccggtgttaagtctcatatcgccagagacagagtctccatcgaacgtttgttgggttccgttaactacggtatgaagtacttgggttctttccacgaaaaccaattggaattggttaacatgggtccagacagattcaacgctaaaaacgtctggttcaagtacgttatgagcttggtcgagttattgtacccaaccactttcaccgttaacaacgacgaaatcgactttgaattgactatcaagtccttgaaggaaatctacaacaagggtaagggtatttgtttaatcggtccaccatacttcatttacttgttgtgtcaatacatgaaggaaaacgacatcgaatttaacgccggtaacagaatcttcatcatcaccggtggtggttggaagactaagcaaaagcaagctttaaatagacaagatttcaaccaattgttaatggaaaccttccatttggctcacgaatctcaaatcagagatactttcaaccaagtcgaattgaacacttgtttcttcgaagacaacagacaaagaaagcacgtcccaccatgggtctacgctagagctttggacccagtcaccttaaagcctgttgaagatggtcaagaaggtttaatttcctacatggacgcctcttccacctcttacccaactttcatcgtcactgacgatatcggtatcattcacactatcaaggatccagacccatatcaaggtaccactattgacatcgtcagaagattgaacaccagagaacaaaagggttgttccctatctatggcttccggtttgaaaatggcttacccatacgatgtcccagactacgcttaatga
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z