BBa_K1855001
1
BBa_K1855001
Lpp-OmpA sZF2
2015-09-16T11:00:00Z
2015-09-17T03:11:22Z
Lpp-OmpA is originally from E.coli; sZF2 is from http://www.nature.com/nmeth/journal/v10/n5/abs/nmeth.2407.html
A fusion protein of a transmembrane domain (Lpp-OmpA) and a zinc-finger domain (sZF2),under pL_lac promotion and containing a C-terminal FLAG tag. It is used to exhibit a zinc-finger dsDNA binding domain complimentary to TGCTGCTTC on the cell surface of E.coli.
false
false
_2282_
27125
27125
9
false
We had to optimise the codon for E.coli K12, and then alter the codon slightly to remove unwanted cut sites. The Lpp-OmpA domain is preceeded by an NdeI cut site, and followed by an AgeI cut site. The sZF2 domain is preceeded by an NheI cut site and followed by a ClaI cut site.
false
Iain Galpin
annotation2466695
1
Lpp-OmpA
range2466695
1
84
518
annotation2466713
1
3x FLAG
range2466713
1
867
938
annotation2466711
1
sZF2
range2466711
1
564
833
annotation2466693
1
pL_lac
range2466693
1
1
56
annotation2466694
1
B0034 Strong RBS
range2466694
1
60
80
annotation2466712
1
Linker
range2466712
1
840
863
annotation2466714
1
BBa_K864600 T0 Terminator
range2466714
1
945
996
annotation2466710
1
Linker
range2466710
1
522
557
BBa_K1855001_sequence
1
ataaatgtgagcggataacattgacattgtgagcggataacaagatactgagcacattaattaaagaggagaaaggtacccatatgaaagctaccaaactggtgctgggcgcggtgatcctgggttccaccctgctggctggttgttctagcaacgcgaagattgatcaaggtattaacccgtacgttggtttcgaaatgggctacgattggctgggtcgcatgccttacaaaggtagcgtcgagaacggtgcctataaagctcagggcgtgcagctgaccgcgaagctgggttacccgattaccgatgatctggatatctacactcgtctgggcggtatggtttggcgtgccgatactaaatctaacgtctatggtaaaaaccacgacaccggcgtaagcccggtatttgctggtggtgtggagtatgctatcacccctgaaatcgctactcgtctggaataccagtggaccaacaacatcggcgatgcgcacactatcggcacccgcccggataacaccggtggctctggcggtggctccggtggcggctccggcgctagctcccgtccgggcgaacgtccttttcagtgtcgtatttgcatgcgtaatttctccagccagactcagctggtgcgtcacactcgtacccacaccggcgaaaaaccgtttcaatgtcgtatctgtatgcgcaacttcagccaatccaccactctgaaacgccatctgcgcacccatacgggtgaaaaaccgttccagtgccgcatttgcatgcgcaacttctcccagcgcaacaacctgggtcgccacctgaaaacccatctgcgtggttccatcgatggtggcggttccggcggcggttcccatgattataaagatgacgatgacaaagactacaaggacgatgacgacaaggactataaggacgacgacgataagtgataattgttcagaacgctcggtcttgcacaccgggcgttttttctttgtgagtcca
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z