BBa_B0012
1
BBa_B0012
TE from coliphageT7
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>.
Released HQ 2013
Transcription terminator for the <i>E.coli</i> RNA polymerase.
false
false
_1_
0
24
7
In stock
false
<P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator.
false
Reshma Shetty
annotation1690
1
polya
range1690
1
28
41
annotation1687
1
stop
range1687
1
34
34
annotation1686
1
T7 TE
range1686
1
8
27
annotation7020
1
BBa_B0012
range7020
1
1
41
BBa_K1903002
1
dCas9 B
dCas9 with protein insertion frames version B
2016-10-13T11:00:00Z
2016-10-17T07:04:20Z
Yes
dCas9
false
false
_2369_
29474
29450
9
true
Golden Gate
false
Sof??a Vieto Fonseca
component2516032
1
BBa_K1903017
component2516039
1
BBa_B0015
annotation2516032
1
BBa_K1903017
range2516032
1
1
4263
annotation2516039
1
BBa_B0015
range2516039
1
4272
4400
BBa_K1903017
1
BBa_K1903017
dCas9 B coding sequence
2016-10-16T11:00:00Z
2016-10-17T07:05:41Z
The source for the Cas9 sequence was UNIPROT accession: Q99ZW2. We optimized the sequence for E. coli and changed the amino acids at positions D10A and H840A for making the protein catalytically inactive.
The sequence is a coding part for a dCAs9 protein assembly with golden gate and has two windows frames for protein insertions at amino acids: N588 and N888
false
false
_2369_
29474
29474
9
false
This CDS was assembled with Golden Gate using four gBlocks.
false
Rafael Montenegro Mar??n
annotation2516413
1
dCas9 B version
range2516413
1
1
4134
BBa_B0015
1
BBa_B0015
double terminator (B0010-B0012)
2003-07-16T11:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
Double terminator consisting of BBa_B0010 and BBa_B0012
false
true
_1_
0
24
7
In stock
false
true
Reshma Shetty
component1916610
1
BBa_B0010
component1916612
1
BBa_B0012
annotation1916612
1
BBa_B0012
range1916612
1
89
129
annotation1916610
1
BBa_B0010
range1916610
1
1
80
BBa_B0010
1
BBa_B0010
T1 from E. coli rrnB
2003-11-19T12:00:00Z
2015-08-31T04:07:20Z
Transcriptional terminator consisting of a 64 bp stem-loop.
false
false
_1_
0
24
7
In stock
false
true
Randy Rettberg
annotation4184
1
stem_loop
range4184
1
12
55
annotation7018
1
BBa_B0010
range7018
1
1
80
BBa_B0010_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc
BBa_K1903017_sequence
1
atggacaagaaatattcgattggtcttgccatcgggacgaactccgtagggtgggcggtcatcaccgacgagtacaaggtaccgtcaaaaaagtttaaagtcttgggaaatacggaccgccactcaatcaagaaaaatttgattggggccctgctgtttgattccggagagacagcagaagccacacgtttgaagcgcactgcacgccgccgctacacgcgtcgtaaaaaccgcatctgctatttgcaggaaattttctcgaacgagatggcaaaggtcgatgacagcttttttcatcgtctggaggaaagttttttggtagaagaggacaaaaagcatgaacgccaccctatcttcgggaacattgtagatgaagtcgcttaccatgagaagtatccgactatttatcatcttcgcaaaaagctggtagattctaccgataaagcggacttgcgcttgatttacttggcgctggcgcacatgatcaagttccgtggccacttcttaattgaaggtgacctgaaccccgacaattcagatgtggacaagctgttcattcaactggtacaaacctataatcagttgttcgaagaaaacccaattaatgcgtccggagtggacgcaaaggctatcttatctgcacgcttaagcaagtctcgtcgtttagagaatcttattgcacagttaccgggagagaaaaagaacggattattcggaaatcttatcgcgcttagtcttggattaacccctaatttcaaaagtaacttcgacttagctgaggatgcgaaattgcagttatccaaggacacttacgatgatgaccttgacaacctgctggcgcagattggtgatcagtacgcggacttgtttctggcggcgaaaaatttgtctgacgccattcttttgtctgatatccttcgtgttaatactgagattaccaaggcgcccctttcggcctcaatgattaaacgttacgacgagcaccatcaggacttgactcttctgaaggctcttgttcgccagcaacttccggaaaagtacaaagagatcttcttcgatcagtccaagaacggctacgctgggtacattgacggaggcgcttcgcaagaagagttctacaagtttattaaaccgattctggagaagatggacggtacggaagagctgttagttaagctgaatcgcgaggacctgttacgcaagcaacgcacgttcgacaatggctccattccacatcaaatccatctgggtgagttacatgcaattctgcgccgccaagaggatttctatccatttcttaaagataaccgcgagaagattgaaaaaatcttgacatttcgtatcccttattatgtggggccgttagcccgtgggaacagccgcttcgcatggatgacgcgcaagtcggaagagacaatcacaccctggaattttgaggaggtagtggacaaaggcgccagcgctcaatcctttattgaacgtatgactaattttgacaaaaatttgcctaacgaaaaagtcctgccgaagcacagcctgttatatgaatactttacggtttataacgaattaacaaaagttaagtacgtgaccgagggaatgcgcaaacccgcattcctttccggcgagcaaaaaaaagcgattgtcgatcttctgttcaaaacaaaccgcaaggttacagtgaagcagcttaaggaagattactttaagaaaattgaatgtttcgattctgtcgaaatttcgggtgtggaggagtcttctcgtttcaacgcaagtcttgggacgtatcacgacgaagacttgcttaagatcatcaaagacaaggacttccttgataatgaggagaatgaggacatcttggaggacatcgtgttgaccttaactctgtttgaggatcgtgagatgatcgaagaacgccttaagacgtacgcacacttatttgacgacaaagttatgaaacagctgaagcgccgtcgctacaccgggtggggacgtttatcacgcaagcttatcaacggaatccgtgataaacaatcgggcaagacgatccttgactttctgaagtcggacggttttgcgaaccgtaatttcatgcaattaattcatgacgattctctgacatttaaagaggacatccagaaagcccaagtgtctggacagggtgacagcctgcatgaacacattgcgaacttagcgggctctccggcaattaagaagggaatcttgcaaacggtgaaggtggtggatgagttggtgaaagttatgggtcgccacaagccagaaaatattgtaatcgagatggcacgcgagaaccaaacaacccaaaagggccaaaagaacagccgtgagcgcatgaaacgtatcgaggagggtatcaaggaattagggtcgcaaatcttgaaagaacatccagttgagaacacgcaactgcaaaacgagaaattgtacctttattatttacaaaatgggcgcgatatgtacgttgaccaagagttggatattaatcgtttgtcggactacgacgtggacgcaattgtgccacagtctttccttaaagatgattctattgataataaagtcctgacacgttctgataagaaccgtggtaagagcgacaacgtcccatctgaagaagtagtgaaaaaaatgaagtcttcaaattactggcgtcagttattaaatgcgaaattgattacgcagcgcaagttcgacaacgaagaccttactaaagctgagcgtgggggtctgtccgaactggacaaagcagggttcattaaacgccaattggtggagacacgtcaaattaccaagcatgttgcacagatcttagactctcgtatgaataccaaatacgacgaaaatgataagctgatccgtgaagtcaaagttattactcttaagtccaagctggtgtccgacttccgtaaagattttcagttctacaaggtacgcgaaatcaataactatcaccacgcccatgacgcgtatttaaatgcggtagtaggtaccgctctgatcaaaaagtatcccaaactggagagcgagttcgtttatggcgactataaagtttacgatgtacgtaagatgattgcaaaatccgaacaagaaatcgggaaagccactgcgaaatactttttctactcaaacattatgaacttctttaagacggaaattactttagccaacggcgagattcgcaaacgccctttaattgaaacaaatggcgagacgggggagattgtatgggacaaaggacgcgatttcgcaaccgttcgcaaagtacttagtatgccacaggtgaatatcgtaaagaaaacggaagtgcagactggcggcttcagcaaagaatcaatccttcccaagcgcaattcagacaagctgattgcacgcaagaaggattgggaccctaaaaagtatggcgggtttgacagccccaccgtagcgtattctgtgttagtcgtcgcaaaagtggaaaagggtaaatcgaagaagcttaaatctgtgaaagaacttttgggaatcacaattatggaacgctcttctttcgagaaaaaccctattgacttcttggaagctaaggggtacaaggaggtaaaaaaggatttgatcattaagttgcccaagtactcattattcgagctggaaaacggacgcaagcgtatgctggcctctgctggcgagttgcaaaaaggaaacgaacttgccctgccgtcaaaatacgttaacttcctgtatttggcttctcattacgaaaaactgaagggtagccctgaagataatgagcagaaacaactttttgttgagcaacataaacattatcttgatgaaattattgagcagattagcgaatttagcaaacgtgtcatcttagctgacgctaaccttgacaaagtgttaagcgcctacaacaaacatcgtgataaacctattcgtgaacaagccgagaatattatccacttgtttacactgacgaatttaggtgctccggccgcttttaagtatttcgataccaccattgatcgcaagcgctatacttctacgaaggaggtgcttgatgcaactcttattcaccaatcaatcacgggtctgtatgaaacgcgcattgatttgagtcagttgggcggtgattaataa
BBa_K1903002_sequence
1
atggacaagaaatattcgattggtcttgccatcgggacgaactccgtagggtgggcggtcatcaccgacgagtacaaggtaccgtcaaaaaagtttaaagtcttgggaaatacggaccgccactcaatcaagaaaaatttgattggggccctgctgtttgattccggagagacagcagaagccacacgtttgaagcgcactgcacgccgccgctacacgcgtcgtaaaaaccgcatctgctatttgcaggaaattttctcgaacgagatggcaaaggtcgatgacagcttttttcatcgtctggaggaaagttttttggtagaagaggacaaaaagcatgaacgccaccctatcttcgggaacattgtagatgaagtcgcttaccatgagaagtatccgactatttatcatcttcgcaaaaagctggtagattctaccgataaagcggacttgcgcttgatttacttggcgctggcgcacatgatcaagttccgtggccacttcttaattgaaggtgacctgaaccccgacaattcagatgtggacaagctgttcattcaactggtacaaacctataatcagttgttcgaagaaaacccaattaatgcgtccggagtggacgcaaaggctatcttatctgcacgcttaagcaagtctcgtcgtttagagaatcttattgcacagttaccgggagagaaaaagaacggattattcggaaatcttatcgcgcttagtcttggattaacccctaatttcaaaagtaacttcgacttagctgaggatgcgaaattgcagttatccaaggacacttacgatgatgaccttgacaacctgctggcgcagattggtgatcagtacgcggacttgtttctggcggcgaaaaatttgtctgacgccattcttttgtctgatatccttcgtgttaatactgagattaccaaggcgcccctttcggcctcaatgattaaacgttacgacgagcaccatcaggacttgactcttctgaaggctcttgttcgccagcaacttccggaaaagtacaaagagatcttcttcgatcagtccaagaacggctacgctgggtacattgacggaggcgcttcgcaagaagagttctacaagtttattaaaccgattctggagaagatggacggtacggaagagctgttagttaagctgaatcgcgaggacctgttacgcaagcaacgcacgttcgacaatggctccattccacatcaaatccatctgggtgagttacatgcaattctgcgccgccaagaggatttctatccatttcttaaagataaccgcgagaagattgaaaaaatcttgacatttcgtatcccttattatgtggggccgttagcccgtgggaacagccgcttcgcatggatgacgcgcaagtcggaagagacaatcacaccctggaattttgaggaggtagtggacaaaggcgccagcgctcaatcctttattgaacgtatgactaattttgacaaaaatttgcctaacgaaaaagtcctgccgaagcacagcctgttatatgaatactttacggtttataacgaattaacaaaagttaagtacgtgaccgagggaatgcgcaaacccgcattcctttccggcgagcaaaaaaaagcgattgtcgatcttctgttcaaaacaaaccgcaaggttacagtgaagcagcttaaggaagattactttaagaaaattgaatgtttcgattctgtcgaaatttcgggtgtggaggagtcttctcgtttcaacgcaagtcttgggacgtatcacgacgaagacttgcttaagatcatcaaagacaaggacttccttgataatgaggagaatgaggacatcttggaggacatcgtgttgaccttaactctgtttgaggatcgtgagatgatcgaagaacgccttaagacgtacgcacacttatttgacgacaaagttatgaaacagctgaagcgccgtcgctacaccgggtggggacgtttatcacgcaagcttatcaacggaatccgtgataaacaatcgggcaagacgatccttgactttctgaagtcggacggttttgcgaaccgtaatttcatgcaattaattcatgacgattctctgacatttaaagaggacatccagaaagcccaagtgtctggacagggtgacagcctgcatgaacacattgcgaacttagcgggctctccggcaattaagaagggaatcttgcaaacggtgaaggtggtggatgagttggtgaaagttatgggtcgccacaagccagaaaatattgtaatcgagatggcacgcgagaaccaaacaacccaaaagggccaaaagaacagccgtgagcgcatgaaacgtatcgaggagggtatcaaggaattagggtcgcaaatcttgaaagaacatccagttgagaacacgcaactgcaaaacgagaaattgtacctttattatttacaaaatgggcgcgatatgtacgttgaccaagagttggatattaatcgtttgtcggactacgacgtggacgcaattgtgccacagtctttccttaaagatgattctattgataataaagtcctgacacgttctgataagaaccgtggtaagagcgacaacgtcccatctgaagaagtagtgaaaaaaatgaagtcttcaaattactggcgtcagttattaaatgcgaaattgattacgcagcgcaagttcgacaacgaagaccttactaaagctgagcgtgggggtctgtccgaactggacaaagcagggttcattaaacgccaattggtggagacacgtcaaattaccaagcatgttgcacagatcttagactctcgtatgaataccaaatacgacgaaaatgataagctgatccgtgaagtcaaagttattactcttaagtccaagctggtgtccgacttccgtaaagattttcagttctacaaggtacgcgaaatcaataactatcaccacgcccatgacgcgtatttaaatgcggtagtaggtaccgctctgatcaaaaagtatcccaaactggagagcgagttcgtttatggcgactataaagtttacgatgtacgtaagatgattgcaaaatccgaacaagaaatcgggaaagccactgcgaaatactttttctactcaaacattatgaacttctttaagacggaaattactttagccaacggcgagattcgcaaacgccctttaattgaaacaaatggcgagacgggggagattgtatgggacaaaggacgcgatttcgcaaccgttcgcaaagtacttagtatgccacaggtgaatatcgtaaagaaaacggaagtgcagactggcggcttcagcaaagaatcaatccttcccaagcgcaattcagacaagctgattgcacgcaagaaggattgggaccctaaaaagtatggcgggtttgacagccccaccgtagcgtattctgtgttagtcgtcgcaaaagtggaaaagggtaaatcgaagaagcttaaatctgtgaaagaacttttgggaatcacaattatggaacgctcttctttcgagaaaaaccctattgacttcttggaagctaaggggtacaaggaggtaaaaaaggatttgatcattaagttgcccaagtactcattattcgagctggaaaacggacgcaagcgtatgctggcctctgctggcgagttgcaaaaaggaaacgaacttgccctgccgtcaaaatacgttaacttcctgtatttggcttctcattacgaaaaactgaagggtagccctgaagataatgagcagaaacaactttttgttgagcaacataaacattatcttgatgaaattattgagcagattagcgaatttagcaaacgtgtcatcttagctgacgctaaccttgacaaagtgttaagcgcctacaacaaacatcgtgataaacctattcgtgaacaagccgagaatattatccacttgtttacactgacgaatttaggtgctccggccgcttttaagtatttcgataccaccattgatcgcaagcgctatacttctacgaaggaggtgcttgatgcaactcttattcaccaatcaatcacgggtctgtatgaaacgcgcattgatttgagtcagttgggcggtgattaataaccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttatatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_B0012_sequence
1
tcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_B0015_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z