BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_K1952000
1
BBa_K1952000
Hydrazine Synthase gamma subunit
2016-10-13T11:00:00Z
2016-10-29T09:10:52Z
source
hydrazine synthase subunit 1
false
false
_2419_
26856
33370
9
false
design
false
Alex Dean
BBa_R0011
1
lacI+pL
Promoter (lacI regulated, lambda pL hybrid)
2003-01-31T12:00:00Z
2015-05-08T01:14:14Z
represillator of Elowitz and Leibler (2000)
Released HQ 2013
Inverting regulatory region controlled by LacI (<bb_part>BBa_C0010</bb_part>, <bb_part>BBa_C0011</bb_part>, etc.) <p> The PLlac 0-1 promoter is a hybrid regulatory region consisting of the promoter P(L) of phage lambda with the cI binding sites replaced with lacO1. The hybrid design allows for strong promotion that can nevertheless be tightly repressed by LacI, the Lac inhibitor (i.e. repressor) (<bb_part>BBa_C0010</bb_part>) ([LUTZ97]). The activity of the promoter can be regulated over a >600-fold range by IPTG in E.Coli DH5-alpha-Z1 (same paper reference).
false
true
_1_
0
24
7
In stock
false
<P> <P>hybrid promoter design to create strong promoter that is, at the same time, highly repressible. note that the upstream operator installed in this hybrid is slightly different than the one in the original source (Lutz and Bujard, 1997). the most upstream operator region is slightly truncated in the represillator version, so that both operators in the hybrid are the same sequence. see references for details. also, the sequence has been truncated after the transcriptional start site.<P>LacI binds to this regulator. This part is incompatible with species containing active LacI coding regions. Lactose and IPTG disable the operation of LacI and increase transcription. This part is incompatible with environments containing lactose or lactose analogs.
true
Neelaksh Varshney, Grace Kenney, Daniel Shen, Samantha Sutton
annotation2002
1
-10
range2002
1
43
48
annotation2001
1
lac O1
range2001
1
26
42
annotation1999
1
lac O1
range1999
1
3
19
annotation2000
1
-35
range2000
1
20
25
annotation7064
1
BBa_R0011
range7064
1
1
54
BBa_K1952006
1
BBa_K1952006
Hydrazine Synthase subunit gamma (Kust-2859) with strong RBS under lactose-inducible promoter
2016-10-18T11:00:00Z
2016-10-19T04:52:58Z
Hydrazine Synthase subunit gamma (Kust-2859) with strong RBS under lactose-inducible promoter
Protein coding region with translation initiation signals, to be used alone or in operon
false
false
_2419_
32346
32346
9
false
none
false
Jessica Zhao
component2522947
1
BBa_R0011
component2522955
1
BBa_K1952003
annotation2522955
1
BBa_K1952003
range2522955
1
64
1239
annotation2522947
1
BBa_R0011
range2522947
1
1
54
BBa_K1952003
1
BBa_K1952003
Hydrazine Synthase subunit gamma (Kust-2859) with strong RBS
2016-10-18T11:00:00Z
2016-10-19T04:43:21Z
B0034 RBS and synthesized DNA of Hydrazine Synthase (part K1952000)
Protein coding region with translation initiation signals. Can be used alone with promoter or combined into a larger operon.
false
false
_2419_
32346
32346
9
false
None
false
Jessica Zhao
component2522880
1
BBa_B0034
component2522881
1
BBa_K1952000
annotation2522881
1
BBa_K1952000
range2522881
1
19
1176
annotation2522880
1
BBa_B0034
range2522880
1
1
12
BBa_B0034_sequence
1
aaagaggagaaa
BBa_K1952000_sequence
1
atggtgattcgccgcaaaatgaacaagatgatcaggaaaggcatgattggcgcggtgatgctgggcgcggcggtggcgattagcggcggcgtggcgaccgcgggctatattcagggcacccatgtgaaaaccgatctgccgggcccgtttcatattaccatgagcccggatggcagcaccctgtttattagcaaccagagcggccatagcgtgacctttgtggatgcgcgcacccagaaagtgaccggcgaagtggcggtgcgcgtgcagccggaagcgagcgccgtcaccccagatggcgcgtttctgtatgtgtgcaacgcggaaagcgatagtgttagcgtggtggatatacaacgcaaacaggaaattaaagagataaaagtgggcgattggccgagcggcattaaaatttcgcccgatggcaaaaccgcgtatgtggcttgtagcggctgcatgtggaacgcgattgatgtgattgataccggccgcatggaaaaagtgcgcagcatttataccagcgattatggcccgcgcatggtggagataagccctgacggaaagaccctggtagcaattctggataccgtgggctcaatcaaccgcagcgtggattttattgatattgcgtccggtcgcgtcgtagagaatcgcgtgattcatgaaagcagcaacctgcgcgatgtggtgtataccccggatggcaaatatatagccgtgacccatcagaccccgaaaaactggctgccggtgtgcgaagcggaaaacggccaggtgtttaccaacaacgtgaccattattgaaaccaaagcgggcggcaaagtagcacgcctgccgctggatgatctgaacaactatgacgggaacccgtatggcatggcgatggatccgaagggaaaatatctgtatattggcgtgcgcggcatgcatcgcgtaacaatcctagatatggataaagtgcttgggctggtacggagctcaactcaggaagaactggattatttaagggacgatctgggcctggtaagggattatctggtggcgagagttccgaccggcctgggcccgagctcagtctgcctgtccccagatggtaaattttgctatgcggcgaactatttttcgaataatgtaaccgtcatacgcaccgcggtggat
BBa_K1952006_sequence
1
aattgtgagcggataacaattgacattgtgagcggataacaagatactgagcacatactagagaaagaggagaaatactagatggtgattcgccgcaaaatgaacaagatgatcaggaaaggcatgattggcgcggtgatgctgggcgcggcggtggcgattagcggcggcgtggcgaccgcgggctatattcagggcacccatgtgaaaaccgatctgccgggcccgtttcatattaccatgagcccggatggcagcaccctgtttattagcaaccagagcggccatagcgtgacctttgtggatgcgcgcacccagaaagtgaccggcgaagtggcggtgcgcgtgcagccggaagcgagcgccgtcaccccagatggcgcgtttctgtatgtgtgcaacgcggaaagcgatagtgttagcgtggtggatatacaacgcaaacaggaaattaaagagataaaagtgggcgattggccgagcggcattaaaatttcgcccgatggcaaaaccgcgtatgtggcttgtagcggctgcatgtggaacgcgattgatgtgattgataccggccgcatggaaaaagtgcgcagcatttataccagcgattatggcccgcgcatggtggagataagccctgacggaaagaccctggtagcaattctggataccgtgggctcaatcaaccgcagcgtggattttattgatattgcgtccggtcgcgtcgtagagaatcgcgtgattcatgaaagcagcaacctgcgcgatgtggtgtataccccggatggcaaatatatagccgtgacccatcagaccccgaaaaactggctgccggtgtgcgaagcggaaaacggccaggtgtttaccaacaacgtgaccattattgaaaccaaagcgggcggcaaagtagcacgcctgccgctggatgatctgaacaactatgacgggaacccgtatggcatggcgatggatccgaagggaaaatatctgtatattggcgtgcgcggcatgcatcgcgtaacaatcctagatatggataaagtgcttgggctggtacggagctcaactcaggaagaactggattatttaagggacgatctgggcctggtaagggattatctggtggcgagagttccgaccggcctgggcccgagctcagtctgcctgtccccagatggtaaattttgctatgcggcgaactatttttcgaataatgtaaccgtcatacgcaccgcggtggat
BBa_R0011_sequence
1
aattgtgagcggataacaattgacattgtgagcggataacaagatactgagcaca
BBa_K1952003_sequence
1
aaagaggagaaatactagatggtgattcgccgcaaaatgaacaagatgatcaggaaaggcatgattggcgcggtgatgctgggcgcggcggtggcgattagcggcggcgtggcgaccgcgggctatattcagggcacccatgtgaaaaccgatctgccgggcccgtttcatattaccatgagcccggatggcagcaccctgtttattagcaaccagagcggccatagcgtgacctttgtggatgcgcgcacccagaaagtgaccggcgaagtggcggtgcgcgtgcagccggaagcgagcgccgtcaccccagatggcgcgtttctgtatgtgtgcaacgcggaaagcgatagtgttagcgtggtggatatacaacgcaaacaggaaattaaagagataaaagtgggcgattggccgagcggcattaaaatttcgcccgatggcaaaaccgcgtatgtggcttgtagcggctgcatgtggaacgcgattgatgtgattgataccggccgcatggaaaaagtgcgcagcatttataccagcgattatggcccgcgcatggtggagataagccctgacggaaagaccctggtagcaattctggataccgtgggctcaatcaaccgcagcgtggattttattgatattgcgtccggtcgcgtcgtagagaatcgcgtgattcatgaaagcagcaacctgcgcgatgtggtgtataccccggatggcaaatatatagccgtgacccatcagaccccgaaaaactggctgccggtgtgcgaagcggaaaacggccaggtgtttaccaacaacgtgaccattattgaaaccaaagcgggcggcaaagtagcacgcctgccgctggatgatctgaacaactatgacgggaacccgtatggcatggcgatggatccgaagggaaaatatctgtatattggcgtgcgcggcatgcatcgcgtaacaatcctagatatggataaagtgcttgggctggtacggagctcaactcaggaagaactggattatttaagggacgatctgggcctggtaagggattatctggtggcgagagttccgaccggcctgggcccgagctcagtctgcctgtccccagatggtaaattttgctatgcggcgaactatttttcgaataatgtaaccgtcatacgcaccgcggtggat
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z