BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_K195306
1
BBa_K195306
RBS,sialyltransferase 0160 and terminator
2009-10-20T11:00:00Z
2015-05-08T01:11:16Z
Photobacterium damsela
alpha-2,6-sialyltransferase can transfer polysaccharides onto the cell membrane to fuse with the membrane proteins, which then form glycoproteins.
false
false
_292_
0
4842
9
Not in stock
false
None
false
Tung Chao
component2059147
1
BBa_B0012
component2059144
1
BBa_K195304
component2059145
1
BBa_B0010
component2059143
1
BBa_B0034
annotation2059145
1
BBa_B0010
range2059145
1
2055
2134
annotation2059144
1
BBa_K195304
range2059144
1
19
2046
annotation2059143
1
BBa_B0034
range2059143
1
1
12
annotation2059147
1
BBa_B0012
range2059147
1
2143
2183
BBa_B0010
1
BBa_B0010
T1 from E. coli rrnB
2003-11-19T12:00:00Z
2015-08-31T04:07:20Z
Transcriptional terminator consisting of a 64 bp stem-loop.
false
false
_1_
0
24
7
In stock
false
true
Randy Rettberg
annotation7018
1
BBa_B0010
range7018
1
1
80
annotation4184
1
stem_loop
range4184
1
12
55
BBa_K195304
1
BBa_K195304
Sialyltransferase 0160
2009-10-20T11:00:00Z
2015-05-08T01:11:16Z
Photobacterium damsela
alpha-2,6-sialyltransferase can transfer polysaccharides onto the cell membrane to fuse with the membrane proteins, which then form glycoproteins.
false
false
_292_
0
4842
9
Not in stock
false
None
false
Tung Chao
BBa_B0012
1
BBa_B0012
TE from coliphageT7
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>.
Released HQ 2013
Transcription terminator for the <i>E.coli</i> RNA polymerase.
false
false
_1_
0
24
7
In stock
false
<P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator.
false
Reshma Shetty
annotation1690
1
polya
range1690
1
28
41
annotation7020
1
BBa_B0012
range7020
1
1
41
annotation1686
1
T7 TE
range1686
1
8
27
annotation1687
1
stop
range1687
1
34
34
BBa_B0010_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc
BBa_B0034_sequence
1
aaagaggagaaa
BBa_K195304_sequence
1
atgaagaaaatactgacagttctatctatttttattctttcagcgtgtaatagtgacaataccagcttgaaagaaacggtaagctctaattctgcagatgtagtagaaacagaaacttaccaactgacaccgattgatgctcctagctcttttttatctcattcttgggagcaaacatgtggcacacctatcttgaatgaaagtgacaagcaagcgatatcttttgattttgttgctccagagttaaagcaagatgaaaagtattgttttacttttaaaggtattacaggcgatcataggtatatcacaaatacaacattaactgttgttgcacctacgctagaagtttacatcgatcatgcatccttaccatcgctacagcagcttatccacattattcaagcaaaagatgaatacccaagtaatcaacgttttgtctcttggaagcgtgtaactgttgatgctgataatgccaataagttaaacattcatacttatccattaaaaggcaataatacctcaccagaaatggtggcagcgattgatgagtatgctcagagcaaaaatcgattgaatatagagttctatacaaatacagctcatgtttttaataatttaccacctattattcaacctttatataataacgagaaggtgaaaatttctcatattagtttgtatgatgatggttcttctgaatatgtaagtttatatcaatggaaagatacaccaaataagatagaaacattagaaggtgaagtatcgcttcttgctaattatttagcaggaacatctccggatgcaccaaaaggaatgggaaatcgttataactggcataaattatatgacactgattattactttttgcgcgaagattaccttgacgttgaagcaaacctacatgatttacgtgattatttaggctcttccgcaaagcaaatgccatgggatgaatttgctaaattatctgattctcagcaaacactatttttagatattgtgggttttgataaagagcaattgcaacaacaatattcacaatccccactaccaaactttatttttaccggcacaacaacttgggctgggggggaaacgaaagagtattatgctcagcaacaagtaaatgtgattaataatgcgatcaatgaaactagcccttattatttaggtaaagactacgatctatttttcaaggggcatcctgctggtggcgttattaacgacatcattcttggaagcttccctgatatgatcaatattccagccaagatttcatttgaggtcttgatgatgacggatatgttgcctgatacagtagctggtattgcgagctctctgtacttcacaattcctgccgataaagttaattttattgtatttacttcatctgacactattactgatcgtgaagaggctcttaaatcaccattagtacaagtgatgctaacgttgggtattgttaaagaaaaagatgttctgttctgggctgatcataaagtaaactcgatggaagttgccattgatgaagcctgtactcggatcattgcaaagcgacaaccaaccgcgagtgatttacgcttggttattgctattatcaaaacaattactgatcttgagcgtattggcgatgtggcagaaagtattgctaaagtcgcattagagagctttagtaataagcaatataacctattggtttctttagaatctcttggccagcatacggttcgaatgctgcatgaggtgttagatgcgtttgctcgtatggatgttaaagccgcaatagaagtgtaccaagaagatgatcgaattgatcaagagtatgagtcgatagtcagacagctaatggcccatatgatggaagatccaagctcaattcctaatgtaatgaaagtgatgtgggcggcacgttctattgagcgagtgggtgatcgctgtcaaaacatttgtgagtacattatctactttgtgaagggtaaagacgttcgccataccaaaccagatgattttggtactatgctcgattaa
BBa_K195306_sequence
1
aaagaggagaaatactagatgaagaaaatactgacagttctatctatttttattctttcagcgtgtaatagtgacaataccagcttgaaagaaacggtaagctctaattctgcagatgtagtagaaacagaaacttaccaactgacaccgattgatgctcctagctcttttttatctcattcttgggagcaaacatgtggcacacctatcttgaatgaaagtgacaagcaagcgatatcttttgattttgttgctccagagttaaagcaagatgaaaagtattgttttacttttaaaggtattacaggcgatcataggtatatcacaaatacaacattaactgttgttgcacctacgctagaagtttacatcgatcatgcatccttaccatcgctacagcagcttatccacattattcaagcaaaagatgaatacccaagtaatcaacgttttgtctcttggaagcgtgtaactgttgatgctgataatgccaataagttaaacattcatacttatccattaaaaggcaataatacctcaccagaaatggtggcagcgattgatgagtatgctcagagcaaaaatcgattgaatatagagttctatacaaatacagctcatgtttttaataatttaccacctattattcaacctttatataataacgagaaggtgaaaatttctcatattagtttgtatgatgatggttcttctgaatatgtaagtttatatcaatggaaagatacaccaaataagatagaaacattagaaggtgaagtatcgcttcttgctaattatttagcaggaacatctccggatgcaccaaaaggaatgggaaatcgttataactggcataaattatatgacactgattattactttttgcgcgaagattaccttgacgttgaagcaaacctacatgatttacgtgattatttaggctcttccgcaaagcaaatgccatgggatgaatttgctaaattatctgattctcagcaaacactatttttagatattgtgggttttgataaagagcaattgcaacaacaatattcacaatccccactaccaaactttatttttaccggcacaacaacttgggctgggggggaaacgaaagagtattatgctcagcaacaagtaaatgtgattaataatgcgatcaatgaaactagcccttattatttaggtaaagactacgatctatttttcaaggggcatcctgctggtggcgttattaacgacatcattcttggaagcttccctgatatgatcaatattccagccaagatttcatttgaggtcttgatgatgacggatatgttgcctgatacagtagctggtattgcgagctctctgtacttcacaattcctgccgataaagttaattttattgtatttacttcatctgacactattactgatcgtgaagaggctcttaaatcaccattagtacaagtgatgctaacgttgggtattgttaaagaaaaagatgttctgttctgggctgatcataaagtaaactcgatggaagttgccattgatgaagcctgtactcggatcattgcaaagcgacaaccaaccgcgagtgatttacgcttggttattgctattatcaaaacaattactgatcttgagcgtattggcgatgtggcagaaagtattgctaaagtcgcattagagagctttagtaataagcaatataacctattggtttctttagaatctcttggccagcatacggttcgaatgctgcatgaggtgttagatgcgtttgctcgtatggatgttaaagccgcaatagaagtgtaccaagaagatgatcgaattgatcaagagtatgagtcgatagtcagacagctaatggcccatatgatggaagatccaagctcaattcctaatgtaatgaaagtgatgtgggcggcacgttctattgagcgagtgggtgatcgctgtcaaaacatttgtgagtacattatctactttgtgaagggtaaagacgttcgccataccaaaccagatgattttggtactatgctcgattaatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_B0012_sequence
1
tcacactggctcaccttcgggtgggcctttctgcgtttata
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z