BBa_K2013003
1
BBa_K2013003
RBS and MHETase
2016-10-11T11:00:00Z
2016-10-12T11:26:25Z
This sequence is from a bacterium called Ideonella sakaiensis 201-F6
This part contains the coding sequence of MHETase which can hydrolyzes MHET to TPA and EG. MHETase is second enzymes on the downstream of PETase in the bacterium Ideonella sakaiensis 201-F6 that Japanese scientists found.MHET is degraded into two kinds of natural environment harmless substances: terephthalic acid and ethylene glycol. We carried out a codon optimization on this part.In addition,We carried out codon optimization on this part.
Experimental Validation
This part is validated through Four ways: amplification, PCR, Enzyme cutting and Sequence.
Amplification
Enzyme:Q5
Primer-F:5′- GAATTCGCGGCCGCTTCTAGAGTACTAGAGTCACACAAAAGGGTACTAGATG-3′
Primer-R:5′- CGCTACTAGTATTATTACGGCGGAGCCGCGCAC-3′
Results
PCR
Enzyme:Taq
Primer-F:5′-CCACCTGACGTCTAAGAAAC-3′
Primer-R:5′-GTATTACCGCCTTTGAGTGA-3′
Results
Double digestion
After the assembly ,the plasmid was transferred into the Competent E. coli top10. After culturing overnight in LB,we minipreped the plasmid for double digestion .The first cutting procedure was performed with EcoRI and HindIII restriction endonuclease. The second cutting procedure was performed with PstI and BaHI restriction endonuclease.
The plasmid was cutted in a 25μL system at 37 ℃ for 1 hours. The Electrophoresis was performed on a 1% Agarose glu.
Results
false
false
_2480_
32794
32794
9
false
This is a Translational units part encoding MHETase.
false
Binglin Liu
annotation2495606
1
RBS
range2495606
1
1
13
annotation2495607
1
MHETase
range2495607
1
20
1842
BBa_K2013003_sequence
1
tactagagtcacacaaaagggtactagatgcagaccaccgtgaccaccatgctgctggcgagcgttgcgctggcggcgtgcgcgggtggcggtagcaccccgctgccgctgccgcagcaacagccgccgcaacaggagccgccgccgccgccggtgccgctggcgagccgtgcggcgtgcgaagcgctgaaggatggtaacggtgacatggtgtggccgaacgcggcgaccgtggttgaggttgcggcgtggcgtgatgcggcgccggcgaccgcgagcgcggcggcgctgccggagcactgcgaagttagcggtgcgatcgcgaagcgtaccggtattgacggctacccgtatgaaatcaaatttcgtctgcgtatgccggcggagtggaacggtcgtttctttatggaaggcggtagcggtaccaacggcagcctgagcgcggcgaccggtagcatcggcggtggccaaattgcgagcgcgctgagccgtaactttgcgaccattgcgaccgatggtggccacgacaacgcggtgaacgataacccggacgcgctgggtaccgttgcgttcggcctggatccgcaggcgcgtctggacatgggttacaacagctatgatcaagtgacccaggcgggcaaggcggcggttgcgcgtttctacggtcgtgcggcggacaaaagctattttatcggttgcagcgagggtggccgtgaaggcatgatgctgagccaacgtttcccgagccactacgatggtatcgtggcgggtgcgccgggttatcagctgccgaaggcgggtattagcggcgcgtggaccacccaaagcctggcgccggcggcggtgggtctggacgcgcagggcgttccgctgattaacaaaagctttagcgacgcggatctgcacctgctgagccaagcgatcctgggtacctgcgatgcgctggacggtctggcggatggcattgttgacaactaccgtgcgtgccaggcggcgttcgatccggcgaccgcggcgaacccggcgaacggtcaagcgctgcaatgcgtgggtgcgaagaccgcggactgcctgagcccggtgcaagttaccgcgatcaaacgtgcgatggcgggtccggttaacagcgcgggcaccccgctgtacaaccgttgggcgtgggatgcgggtatgagcggcctgagcggtaccacctataaccaaggttggcgttcctggtggctgggcagctttaacagcagcgcgaacaacgcgcagcgtgtgagcggtttcagcgcgcgtagctggctggttgactttgcgaccccgccggagccgatgccgatgacccaggtggcggcgcgtatgatgaagttcgactttgatatcgacccgctgaaaatttgggcgaccagcggtcaattcacccagagcagcatggattggcacggtgcgaccagcaccgatctggcggcgtttcgtgaccgtggtggcaagatgatcctgtaccacggtatgagcgacgcggcgttcagcgcgctggataccgcggactactatgaacgtctgggtgcggcgatgccgggtgcggcgggtttcgcgcgtctgtttctggtgccgggtatgaaccattgcagcggtggtccgggcaccgatcgttttgacatgctgaccccgctggttgcgtgggttgagcgtggtgaagcgccggatcaaattagcgcgtggagcggcaccccgggttatttcggtgttgcggcgcgtacccgtccgctgtgcccgtacccgcagatcgcgcgttataaaggtagcggcgacattaacaccgaggcgaacttcgcgtgcgcggctccgccgtaataa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z