BBa_K2013005
1
BBa_K2013005
RBS and terephthalic acid(TPA) transporter
2016-10-11T11:00:00Z
2016-10-12T11:39:51Z
This sequence is from a bacterium called Ideonella sakaiensis 201-F6
The sequence in this part is one of the sequences encoding TPA transporter. Because of it,TPA will be transported from extracellular to intracellular.In addition,We carried out codon optimization on this part.
Experimental Validation
This part is validated through Four ways: amplification, PCR, Enzyme cutting and Sequence.
Amplification
Enzyme:Q5
Primer-F:5′-GAATTCGCGGCCGCTTCTAGAGTACTAGAGTCACACAAAAGGGTACTAGATG-3′
Primer-R:5′- CGCTACTAGTATTATTAATCTTCTTGAAACGCGTCCT-3′
Results
PCR
Enzyme:Taq
Primer-F:5′-CCACCTGACGTCTAAGAAAC-3′
Primer-R:5′-GTATTACCGCCTTTGAGTGA-3′
Results
Double digestion
After the assembly ,the plasmid was transferred into the Competent E. coli top10. After culturing overnight in LB,we minipreped the plasmid for double digestion .The first cutting procedure was performed with EcoRI and SpeI restriction endonuclease. The second cutting procedure was performed with NcoI and PstI restriction endonuclease.The plasmid was cutted in a 25μL system at 37 ℃ for 1 hours. The Electrophoresis was performed on a 1% Agarose glu.
Results
false
false
_2480_
32794
32794
9
false
This is a Translational units part encoding TPA transporter.
false
Binglin Liu
annotation2495645
1
RBS
range2495645
1
1
13
annotation2496128
1
ISF6_0077
range2496128
1
20
1528
BBa_K2013005_sequence
1
tcacacaaaagggtactagatggacctgctgaacaacctggcgctgggcttcggtgtggcgtttaccctgcaaaacctggcgtacgcgttcctgggctgcattttgggaactctgatcggtgtcctgcctggccttgggccagtagcaactatcgctatgttgcttcccagcatctacgcgctggacgcgaccccggcgctgattatgctggcgggtatctactatggcgcgcaatatggtggcagcaccaccgcgatcctgattaacgttccgggcgagagcagcagcgtggttaccgccattgatggctaccagatggctcgccagggccgcgctgggccagcactggctgcggctgggttaggtagcttctttgcgggctgcgtgggcaccattgttattgcggcgttcgcgcccccgttgaccgaactggcctttaagtttggaccggcggagtatttttcgttaatggtactggggttgattggtgctgtcgtactggcctccggcagccttctgaaagcaattagcatgattatccttgggcttcttttggcgcagatcaatacagatgtaattagcggaacggctcgctatagttttgatatcccagaattaacagacggaatcggctttgttaccatcgcaatgggtgttttcggatttggagaaatcattgcaaatcttggtcagccagccgagaatcgcgaagttttcaccaaagacgtgaagggactgtggccgacccgtgaagactttaagctggcttggccagcagtagtacgtgggacggcattgggaagtttattaggtgtgttaccgggcgggggcgcattactttccagtttcgcgtcgtacacgatggagaaaaaaatggcaggcgataagggtcgttttggcaagggtgatatccgtggcgttgcgggtccggaaagcgcgaacaacgcgggtgcgcagaccagcttcattccgatgctgaccctgggtatcccgccgaacgcggtgatggcgctgatggttggcgcgatgaccattaaagatatccagccgggtccgcaagtgatgaccagcaacccgaccctgttttggggcctgattgcgagcatgtgggtgggtaacctgatgctggttatcctgaacctgccgatgatcggtatttggatcaagctgctgaccgtgccgtaccgttacctgttcccggcgattaccctgttttgctgcatcggcgtttacaccctgaacaacaacaacttcgacgtgtatatgaccgcggcgttcgcggttattggttacatcttttataagctgagctgcgaggcggccccactgttattgggttttattcttggtcccatgatggaggagaaccttcgtcgtgccttgttgctgagccgtggcgattggagcacctttgtgacccgtccgctgagcgcgggtctgctgctggcggcggttgcgatgattgtgatcgttatgctgccgagcatcaagaaaaagcgtgaggacgcgtttcaagaagattaataa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z