BBa_K2013019
1
BBa_K2013019
4-hydroxy-2-ketovalerate aldolase
2016-10-11T11:00:00Z
2016-10-15T08:18:06Z
This sequence is from Enterobacter sp. 638
This part contains the sequence of coding 4-hydroxy-2-ketovalerate aldolase that catalyzes 4-hydroxy-2-oxopentenoate into pyruvate.In addition,We carried out codon optimization on this part
Experimental Validation
This part is validated through Four ways: amplification, PCR, Enzyme cutting and Sequence.
Amplification
Enzyme:KOD
Primer-F:5GAATTCGCGGCCGCTTCTAGAGTACTAGAGAAAGAGGAGAAATACTAGATGAACGGTAAG-3′
Primer-R:5′- CGCTACTAGTATTATTATTTGTTGTTACGCAGGTCCAGCGCA-3′
Results
PCR
Enzyme:Taq
Primer-F:5′-CCACCTGACGTCTAAGAAAC-3′
Primer-R:5′-GTATTACCGCCTTTGAGTGA-3′
Results
Double digestion
After the assembly ,the plasmid was transferred into the Competent E. coli top10. After culturing overnight in LB,we minipreped the plasmid for double digestion .The first cutting procedure was performed with EcoRI and EcoRV restriction endonuclease. The second cutting procedure was performed with PstI and NcoI restriction endonuclease.The plasmid was cutted in a 25μL system at 37 ℃ for 1 hours. The Electrophoresis was performed on a 1% Agarose glu.
Results
false
false
_2480_
32794
32794
9
false
This is a Translational units part that encodes 4-hydroxy-2-ketovalerate aldolase
false
Mei Deng
annotation2496055
1
RBS
range2496055
1
1
13
annotation2496429
1
4-hydroxy-2-ketovalerate aldolase
range2496429
1
20
1035
BBa_K2013019_sequence
1
aaagaggagaaatactagatgaacggtaagaaactgtacatcagcgatgtgaccctgcgtgacggcatgcacgcgattcgtcaccagtatagcctggagaacgttcgtcaaatcgcgaaggcgctggacgatgcgcacgtggatagcattgaagttgcgcacggtgacggtctgcaaggtagcagcttcaactacggttttggcgcgcacagcgatctggagtggatcgaagcggcggcggacgtggttaagcacgcgaaaattgcgaccctgctgctgccgggtatcggcaccattcacgatctgaaaaacgcgtggcaagcgggtgcgcgtgtggttcgtgtggcgacccactgcaccgaggcggatgttagcgcgcagcacatccaatatgcgcgtgaactgggtatggacaccgtgggcttcctgatgatgagccacatgaccaccccggagaacctggcgaagcaggcgaaactgatggaaggttacggcgcgacctgcatctatgtggttgacagcggtggcgcgatgaacatgagcgacattcgtgatcgttttcgtgcgctgaaggcggtgctgaaaccggaaacccaaaccggtatgcacgcgcaccacaacctgagcctgggcgtggcgaacagcatcgaagcggttgaggaaggttgcgaccgtattgatgcgagcctggcgggtatgggtgcgggtgcgggtaacgcgccgctggaagtgttcattgcggcggcggacaagctgggttggcagcacggcaccgatctgtacgcgctgatggacgcggcggacgatctggtgcgtccgctgcaagatcgtccggtgcgtgttgaccgtgaaaccctggcgctgggttacgcgggcgtttatagcagctttctgcgtcactgcgaaaccgcggcggcgcgttatggtctgagcgcggtggacatcctggttgagctgggcaagcgtcgtatggttggtggccaggaagacatgattgtggatgttgcgctggacctgcgtaacaacaaataataa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z