BBa_K2014009
1
BBa_K2014009
pxylS-E1_5'UTR->sfGFP_B
2016-10-11T11:00:00Z
2016-10-14T10:32:27Z
The xylS promoter is a modified version of xylR-xylF-xylA1 fragment of E.coli K-12 genome. We used one of the sfGFP permutation, with optimized codon sequence.
We were using xylS promoter to compare the influence of different ORFs structures coding for the same protein sfGFP.
false
false
_2481_
27987
28000
9
false
We were looking for the best method to optimize gene expression in E.coli.
false
Daria Niewiadomska
annotation2506900
1
His-Tag
range2506900
1
132
161
annotation2506890
1
ht-sfGFP-B
range2506890
1
132
881
annotation2506887
1
-10 signal
range2506887
1
79
84
annotation2506899
1
RBS
range2506899
1
119
124
annotation2506878
1
XylR binding site
range2506878
1
20
34
annotation2506898
1
2nd RBS
range2506898
1
107
115
annotation2506889
1
5'UTR E1
range2506889
1
90
131
annotation2506879
1
XylR binding site
range2506879
1
40
55
annotation2506888
1
CRP binding site
range2506888
1
1
19
annotation2506886
1
-35 signal
range2506886
1
56
60
BBa_K2014009_sequence
1
tgcgagcgagcgcacacttgtgaattatctcaatagcagtgtgaaataacataattgagcaactgaaagggagtgcccaatattacgacatcagaaataattttgtttaactttaagaaggagatatatccatgggcagcagccatcatcatcatcatcatatgcgcaaaggcgaagaactgtttaccggcgtggtgccgattctggtggaactggatggcgatgtgaacggccataaatttagcgtgcgcggcgaaggcgaaggcgatgcgaccaacggcaaactgaccctgaaatttatttgcaccaccggcaaactgccggtgccgtggccgaccctggtgaccaccctgacctatggcgtgcagtgctttgcgcgctatccggatcatatgaaacagcatgatttttttaaaagcgcgatgccggaaggctatgtgcaggaacgcaccattagctttaaagatgatggcacctataaaacccgcgcggaagtgaaatttgaaggcgataccctggtgaaccgcattgaactgaaaggcattgattttaaagaagatggcaacattctgggccataaactggaatataactttaacagccataacgtgtatattaccgcggataaacagaaaaacggcattaaagcgaactttaaaattcgccataacgtggaagatggcagcgtgcagctggcggatcattatcagcagaacaccccgattggcgatggcccggtgctgctgccggataaccattatctgagcacccagagcgtgctgagcaaagatccgaacgaaaaacgcgatcatatggtgctgctggaatttgtgaccgcggcgggcattacccatggcatggatgaactgtataaataataa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z