BBa_K2036006
1
BBa_K2036006
RBS-CIII
2016-09-18T11:00:00Z
2016-09-28T01:20:43Z
come from bacteriaphage lambda
CIII is a inhibitor of Ftsh,we add a RBS to provide more possibilities to users to create more complex circuit.
false
false
_2503_
25901
25901
9
false
you can add this part behind a promoter region or a coding region for tandom expression
false
Zhangyu Cheng
annotation2484150
1
RBS
range2484150
1
1
12
annotation2484151
1
spacer sequence
range2484151
1
13
18
BBa_K2036008
1
BBa_K2036008
RBS-CIII-RBS-CIII,tandem expression
2016-09-18T11:00:00Z
2016-10-24T11:09:59Z
come from bacteriaphage lambda
RBS-CIII-RBS-CIII,as Ftsh normally exists in E.coli to degrade CII, CIII functions as a inhibitor of Ftsh, and tandom expression of CIII,may enhance the effect on Ftsh
false
false
_2503_
28503
25901
9
false
According to the Registry, prefix of other sequence are supposed to be "GAATTCGCGGCCGCTTCTAGAG" , so the scar produced by 3A assembly should be "TACTAGAG"
false
Zhangyu Cheng
annotation2484159
1
BBa_K2036006
range2484159
1
1
183
annotation2484158
1
spacer sequence
range2484158
1
13
18
annotation2484157
1
RBS
range2484157
1
1
12
annotation2484162
1
BBa_K2036006
range2484162
1
192
374
annotation2484161
1
spacer sequence
range2484161
1
204
209
annotation2484160
1
RBS
range2484160
1
192
203
BBa_K2036013
1
BBa_K2036013
RBS-CII-TT-pRE-RBS-GFP-LVAssrAtag
2016-09-18T11:00:00Z
2016-09-24T05:05:39Z
CII and pRE are a part of bactriaphage lambda operon.
RBS-CII-TT-pRE-RBS-GFP-LVAtag, it is a GFP regulationary circuits. When CII is expressed it can further activate GFP and forming a Switching Lag-times.
false
false
_2503_
28503
25901
9
false
When CII is expressed it can further activate GFP and forming a Switching Lag-times. And in HUST-China 2016 designed circuit,this composite is constructed to test CII and pRE interaction.
false
Zhangyu Cheng
component2484205
1
BBa_K2036011
component2484204
1
BBa_K2036012
annotation2484204
1
BBa_K2036012
range2484204
1
1
441
annotation2484205
1
BBa_K2036011
range2484205
1
450
1280
BBa_K2036011
1
BBa_K2036011
pRE-GFP-LVAssrAtag
2016-09-18T11:00:00Z
2016-09-24T05:02:49Z
pRE comes from bacteriaphage lambda and GFP-LVAtag are standard part from Rgistry
pRE-GFP-LVAtag, it is a GFP generator,and the production of GFP will be activated by CII and CIII.
false
false
_2503_
28503
25901
9
false
One should put CII as an activator of pRE when constructing gene circuit.
false
Zhangyu Cheng
annotation2484245
1
LVAssrAtag
range2484245
1
790
831
annotation2484244
1
scar
range2484244
1
71
75
annotation2484242
1
RBS core
range2484242
1
53
64
annotation2484241
1
pRE
range2484241
1
1
52
annotation2484243
1
GFP
range2484243
1
76
789
BBa_K2036012
1
BBa_K2036012
RBS-CII-TT
2016-09-18T11:00:00Z
2016-09-20T01:36:08Z
come form bacteriaphage lambda.
RBS-CII-TT, CII is a regulatory gene derived from bacteriaphage lambda. It is an activate pRE's expression. And it can be normally degrade by Ftsh in E.coli.
false
false
_2503_
25901
25901
9
false
CII is an transcriptional activaor. One should add a related promoter downstream of CII.
false
Zhangyu Cheng
annotation2484265
1
CII
range2484265
1
19
312
annotation2484266
1
terminator
range2484266
1
313
441
annotation2484264
1
RBS core
range2484264
1
1
12
BBa_K2036014
1
BBa_K2036014
RBS-CIII-RBS-CIII-RBS-CII-TT-pRE-RBS-GFP-LVAssrAtag
2016-09-18T11:00:00Z
2016-09-24T05:06:04Z
bacteriaphage lambda
RBS-CIII-RBS-CIII-RBS-CII-TT-pRE-RBS-GFP-LVAtag
false
false
_2503_
28503
25901
9
false
add a promoter frontier
false
Zhangyu Cheng
component2484207
1
BBa_K2036006
component2484212
1
BBa_K2036008
component2484210
1
BBa_K2036006
component2484215
1
BBa_K2036013
annotation2484210
1
BBa_K2036006
range2484210
1
192
374
annotation2484215
1
BBa_K2036013
range2484215
1
383
1662
annotation2484207
1
BBa_K2036006
range2484207
1
1
183
annotation2484212
1
BBa_K2036008
range2484212
1
1
374
BBa_K2036012_sequence
1
aaagaggagaaatacacgatggttcgtgcaaacaaacgcaacgaggctctacgaatcgagagtgcgttgcttaacaaaatcgcaatgcttggaactgagaagacagcggaagctgtgggcgttgataagtcgcagatcagcaggtggaagagggactggattccaaagttctcaatgctgcttgctgttcttgaatggggggtcgttgacgacgacatggctcgattggcgcgacaagttgctgcgattctcaccaataaaaaacgcccggcggcaaccgagcgttctgaacaaatccagatggagttctgaccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_K2036008_sequence
1
aaagaggagaaatacacgatgcaatatgccattgcagggtggcctgttgctggctgcccttccgaatctttacttgaacgaatcacccgtaaattacgtgacggatggaaacgccttatcgacatacttaatcagccaggagtcccaaagaatggatcaaacacttatggctatccagactaatactagagaaagaggagaaatacacgatgcaatatgccattgcagggtggcctgttgctggctgcccttccgaatctttacttgaacgaatcacccgtaaattacgtgacggatggaaacgccttatcgacatacttaatcagccaggagtcccaaagaatggatcaaacacttatggctatccagactaa
BBa_K2036006_sequence
1
aaagaggagaaatacacgatgcaatatgccattgcagggtggcctgttgctggctgcccttccgaatctttacttgaacgaatcacccgtaaattacgtgacggatggaaacgccttatcgacatacttaatcagccaggagtcccaaagaatggatcaaacacttatggctatccagactaa
BBa_K2036014_sequence
1
aaagaggagaaatacacgatgcaatatgccattgcagggtggcctgttgctggctgcccttccgaatctttacttgaacgaatcacccgtaaattacgtgacggatggaaacgccttatcgacatacttaatcagccaggagtcccaaagaatggatcaaacacttatggctatccagactaatactagagaaagaggagaaatacacgatgcaatatgccattgcagggtggcctgttgctggctgcccttccgaatctttacttgaacgaatcacccgtaaattacgtgacggatggaaacgccttatcgacatacttaatcagccaggagtcccaaagaatggatcaaacacttatggctatccagactaatactagagaaagaggagaaatacacgatggttcgtgcaaacaaacgcaacgaggctctacgaatcgagagtgcgttgcttaacaaaatcgcaatgcttggaactgagaagacagcggaagctgtgggcgttgataagtcgcagatcagcaggtggaagagggactggattccaaagttctcaatgctgcttgctgttcttgaatggggggtcgttgacgacgacatggctcgattggcgcgacaagttgctgcgattctcaccaataaaaaacgcccggcggcaaccgagcgttctgaacaaatccagatggagttctgaccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttatatactagagagagcctcgttgcgtttgtttgcacgaaccatatgtaagtatttccttagataaagaggagaaatacacgactagatgcgtaaaggagaagaacttttcactggagttgtcccaattcttgttgaattagatggtgatgttaatgggcacaaattttctgtcagtggagagggtgaaggtgatgcaacatacggaaaacttacccttaaatttatttgcactactggaaaactacctgttccatggccaacacttgtcactactttcggttatggtgttcaatgctttgcgagatacccagatcatatgaaacagcatgactttttcaagagtgccatgcccgaaggttatgtacaggaaagaactatatttttcaaagatgacgggaactacaagacacgtgctgaagtcaagtttgaaggtgatacccttgttaatagaatcgagttaaaaggtattgattttaaagaagatggaaacattcttggacacaaattggaatacaactataactcacacaatgtatacatcatggcagacaaacaaaagaatggaatcaaagttaacttcaaaattagacacaacattgaagatggaagcgttcaactagcagaccattatcaacaaaatactccaattggcgatggccctgtccttttaccagacaaccattacctgtccacacaatctgccctttcgaaagatcccaacgaaaagagagaccacatggtccttcttgagtttgtaacagctgctgggattacacatggcatggatgaactatacaaagctgcaaacgacgaaaactacgctttagtagcttaataataa
BBa_K2036011_sequence
1
agagcctcgttgcgtttgtttgcacgaaccatatgtaagtatttccttagataaagaggagaaatacacgactagatgcgtaaaggagaagaacttttcactggagttgtcccaattcttgttgaattagatggtgatgttaatgggcacaaattttctgtcagtggagagggtgaaggtgatgcaacatacggaaaacttacccttaaatttatttgcactactggaaaactacctgttccatggccaacacttgtcactactttcggttatggtgttcaatgctttgcgagatacccagatcatatgaaacagcatgactttttcaagagtgccatgcccgaaggttatgtacaggaaagaactatatttttcaaagatgacgggaactacaagacacgtgctgaagtcaagtttgaaggtgatacccttgttaatagaatcgagttaaaaggtattgattttaaagaagatggaaacattcttggacacaaattggaatacaactataactcacacaatgtatacatcatggcagacaaacaaaagaatggaatcaaagttaacttcaaaattagacacaacattgaagatggaagcgttcaactagcagaccattatcaacaaaatactccaattggcgatggccctgtccttttaccagacaaccattacctgtccacacaatctgccctttcgaaagatcccaacgaaaagagagaccacatggtccttcttgagtttgtaacagctgctgggattacacatggcatggatgaactatacaaagctgcaaacgacgaaaactacgctttagtagcttaataataa
BBa_K2036013_sequence
1
aaagaggagaaatacacgatggttcgtgcaaacaaacgcaacgaggctctacgaatcgagagtgcgttgcttaacaaaatcgcaatgcttggaactgagaagacagcggaagctgtgggcgttgataagtcgcagatcagcaggtggaagagggactggattccaaagttctcaatgctgcttgctgttcttgaatggggggtcgttgacgacgacatggctcgattggcgcgacaagttgctgcgattctcaccaataaaaaacgcccggcggcaaccgagcgttctgaacaaatccagatggagttctgaccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttatatactagagagagcctcgttgcgtttgtttgcacgaaccatatgtaagtatttccttagataaagaggagaaatacacgactagatgcgtaaaggagaagaacttttcactggagttgtcccaattcttgttgaattagatggtgatgttaatgggcacaaattttctgtcagtggagagggtgaaggtgatgcaacatacggaaaacttacccttaaatttatttgcactactggaaaactacctgttccatggccaacacttgtcactactttcggttatggtgttcaatgctttgcgagatacccagatcatatgaaacagcatgactttttcaagagtgccatgcccgaaggttatgtacaggaaagaactatatttttcaaagatgacgggaactacaagacacgtgctgaagtcaagtttgaaggtgatacccttgttaatagaatcgagttaaaaggtattgattttaaagaagatggaaacattcttggacacaaattggaatacaactataactcacacaatgtatacatcatggcagacaaacaaaagaatggaatcaaagttaacttcaaaattagacacaacattgaagatggaagcgttcaactagcagaccattatcaacaaaatactccaattggcgatggccctgtccttttaccagacaaccattacctgtccacacaatctgccctttcgaaagatcccaacgaaaagagagaccacatggtccttcttgagtttgtaacagctgctgggattacacatggcatggatgaactatacaaagctgcaaacgacgaaaactacgctttagtagcttaataataa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z