BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_K538100
1
BBa_K538100
RBS + Cpn10
2011-09-07T11:00:00Z
2015-05-08T01:12:37Z
-
-
false
false
_704_
0
9985
9
Not in stock
false
-
false
Bas Stringer
component2133879
1
BBa_K538000
component2133876
1
BBa_B0034
annotation2133876
1
BBa_B0034
range2133876
1
1
12
annotation2133879
1
BBa_K538000
range2133879
1
19
315
BBa_K541506
1
BBa_K541506
Reflectin1A from Cephalopod
2011-07-18T11:00:00Z
2015-05-08T01:12:38Z
Cephalopod
Released HQ 2013
Reflectin is a self-assembling protein that has the ability to reflect the sun light which depends on the thickness of the protein layer. Therefore, we thought that this ability could be used as a novel reporter for B.subtilis and E.coli.
false
false
_708_
0
8463
9
In stock
false
Optimized for both B.subtilis and E.coli
false
Fazilet Guler
annotation2123461
1
Reflectin
range2123461
1
1
855
BBa_K2069001
1
BBa_K2069001
pT7 + RBS + Reflectin (+LipA tag)
2016-10-11T11:00:00Z
2016-10-12T10:33:53Z
The subparts were obtained from the 2016 distribution kit
This part can express reflectin in the outer layer of bacteria, and was used in our project to assemble our final biobrick
false
false
_2537_
29482
29482
9
false
No special issues regarding the design
false
Mara Valverde Rasc??n
component2494127
1
BBa_K525998
component2494129
1
BBa_K541506
annotation2494127
1
BBa_K525998
range2494127
1
1
32
annotation2494129
1
BBa_K541506
range2494129
1
39
893
BBa_K538000
1
Cpn10
Cpn10 (O. antarctica)
2011-07-27T11:00:00Z
2015-05-08T01:12:36Z
''De novo'' synthesis
Released HQ 2013
This part encodes the protein ''cochaperonin 10'', which is part of the Cpn10/Cpn60 chaperonin system of ''Oleispira antarctica''.
[More information will follow soon.]
false
false
_704_
0
9985
9
In stock
true
The protein's sequence[1] was published by Ferrer ''et al.'' in 2004. Pre- and suffixes were added to this as clarified in OpenWetWare's BioBrick standards[2] and, as is recommended, the TAA stop codon was replaced with TAATAA. The sequence's conformity with Assembly standard 10[3] was confirmed using the EMBOSS recoder[4], by recoding restriction sites of EcoRI, XbaI, SpeI, PstI, NotI, PvuII, XhoI, AvrII, NheI and SapI.
1 - http://www.ncbi.nlm.nih.gov/nuccore/22266159?from=458&to=751&report=gbwithparts
2 - http://openwetware.org/wiki/Biobrick_standard
3 - http://partsregistry.org/Help:Assembly_standard_10
4 - http://bioweb2.pasteur.fr/docs/EMBOSS/recoder.html
false
Bas Stringer (Sequence by Paul van Dieken)
annotation2124174
1
Start Codon
range2124174
1
1
3
annotation2124175
1
Double Stop Codon
range2124175
1
292
297
BBa_K2069003
1
BBa_K2069003
pT7 + RBS + Reflectin (+LipA tag) + RBS + Cpn10
2016-10-11T11:00:00Z
2016-10-12T10:54:54Z
assembly of parts from the 2016 distribution kit
This part allows the expression of Reflectin and Cpn10 with the addition of a terminator. It caontains the part BBa_K538100 from Amsterdam's 2011 project icE. coli
false
false
_2537_
29482
29482
9
false
no special issues
false
Mara Valverde Rasc??n
component2494250
1
BBa_K2069001
component2494256
1
BBa_K538100
annotation2494256
1
BBa_K538100
range2494256
1
902
1216
annotation2494250
1
BBa_K2069001
range2494250
1
1
893
BBa_K525998
1
pT7
Promoter T7 and RBS
2011-09-12T11:00:00Z
2015-05-08T01:12:35Z
Synthesis
Released HQ 2013
Promoter T7 and RBS
false
false
_690_
0
8543
9
In stock
false
Synthesis
false
Anna Drong
annotation2129433
1
RBS
range2129433
1
24
27
annotation2129432
1
T7 promoter
range2129432
1
1
20
annotation2127788
1
B0034
range2127788
1
21
32
BBa_K541506_sequence
1
atgaatcgctttatgaatcgctatcgcccgatgttcaataatatgtactctaacatgtaccgtggccgctaccgcggtatgatggaaccgatgagccgcatgactatggactttcagggccgctacatggacagccaaggccgcatggtggacccgcgctactacgattactacggccgcttcaacgattacgaccgctactatggccgcagcatgttcaactatggctggatgatggacggcgatcgctacaaccgctataaccgctggatggattacccggagcgctacatggatatgtctggctaccagatggatatgtctggccgctggatggatatgcagggccgccactgcaacccgtattctcagtggatgatgtacaactacaaccgccatggctactacccgaactactcttacggccgccacatgttttatccggaacgctggatggacatgtctaactactctatggacatgtatggccgctatatggatcgctggggccgctactgtaacccgttttctcagtacatgaactactacggccgctactggaactacccgggctacaataattactactattctcgcaacatgtattacccggaacgctactttgacatgtctaactggcagatggacatgcaaggccgctggatggacaaccagggccgctattgttccccgtactggaacaactggtacggccgccatatgtactacccgtaccagaacaactacttctacggccgctatgactacccgggcatggactattccaactaccaaatggacatgcagggccgctacatggaccagtacggcatgaacgactactactattaataa
BBa_K538100_sequence
1
aaagaggagaaatactagatgaaaatccgtccattacatgatcgtattgttgttcgccgtaaagaagaagagaccgcaactgcgggtggtattattttaccgggcgctgcggcagaaaaaccaaatcaaggtgttgttatctctgtgggtactggccgtattcttgataatggttcagtgcaagcgctggcggttaacgaaggcgatgttgtcgtttttggtaaatactcaggtcaaaatactatcgatatcgatggtgaagaattattgattttgaatgaaagtgatatctacggcgttttagaagcttaataa
BBa_K2069003_sequence
1
taatacgactcactatagggaaagaggagaaatactagatgaatcgctttatgaatcgctatcgcccgatgttcaataatatgtactctaacatgtaccgtggccgctaccgcggtatgatggaaccgatgagccgcatgactatggactttcagggccgctacatggacagccaaggccgcatggtggacccgcgctactacgattactacggccgcttcaacgattacgaccgctactatggccgcagcatgttcaactatggctggatgatggacggcgatcgctacaaccgctataaccgctggatggattacccggagcgctacatggatatgtctggctaccagatggatatgtctggccgctggatggatatgcagggccgccactgcaacccgtattctcagtggatgatgtacaactacaaccgccatggctactacccgaactactcttacggccgccacatgttttatccggaacgctggatggacatgtctaactactctatggacatgtatggccgctatatggatcgctggggccgctactgtaacccgttttctcagtacatgaactactacggccgctactggaactacccgggctacaataattactactattctcgcaacatgtattacccggaacgctactttgacatgtctaactggcagatggacatgcaaggccgctggatggacaaccagggccgctattgttccccgtactggaacaactggtacggccgccatatgtactacccgtaccagaacaactacttctacggccgctatgactacccgggcatggactattccaactaccaaatggacatgcagggccgctacatggaccagtacggcatgaacgactactactattaataatactagagaaagaggagaaatactagatgaaaatccgtccattacatgatcgtattgttgttcgccgtaaagaagaagagaccgcaactgcgggtggtattattttaccgggcgctgcggcagaaaaaccaaatcaaggtgttgttatctctgtgggtactggccgtattcttgataatggttcagtgcaagcgctggcggttaacgaaggcgatgttgtcgtttttggtaaatactcaggtcaaaatactatcgatatcgatggtgaagaattattgattttgaatgaaagtgatatctacggcgttttagaagcttaataa
BBa_B0034_sequence
1
aaagaggagaaa
BBa_K525998_sequence
1
taatacgactcactatagggaaagaggagaaa
BBa_K2069001_sequence
1
taatacgactcactatagggaaagaggagaaatactagatgaatcgctttatgaatcgctatcgcccgatgttcaataatatgtactctaacatgtaccgtggccgctaccgcggtatgatggaaccgatgagccgcatgactatggactttcagggccgctacatggacagccaaggccgcatggtggacccgcgctactacgattactacggccgcttcaacgattacgaccgctactatggccgcagcatgttcaactatggctggatgatggacggcgatcgctacaaccgctataaccgctggatggattacccggagcgctacatggatatgtctggctaccagatggatatgtctggccgctggatggatatgcagggccgccactgcaacccgtattctcagtggatgatgtacaactacaaccgccatggctactacccgaactactcttacggccgccacatgttttatccggaacgctggatggacatgtctaactactctatggacatgtatggccgctatatggatcgctggggccgctactgtaacccgttttctcagtacatgaactactacggccgctactggaactacccgggctacaataattactactattctcgcaacatgtattacccggaacgctactttgacatgtctaactggcagatggacatgcaaggccgctggatggacaaccagggccgctattgttccccgtactggaacaactggtacggccgccatatgtactacccgtaccagaacaactacttctacggccgctatgactacccgggcatggactattccaactaccaaatggacatgcagggccgctacatggaccagtacggcatgaacgactactactattaataa
BBa_K538000_sequence
1
atgaaaatccgtccattacatgatcgtattgttgttcgccgtaaagaagaagagaccgcaactgcgggtggtattattttaccgggcgctgcggcagaaaaaccaaatcaaggtgttgttatctctgtgggtactggccgtattcttgataatggttcagtgcaagcgctggcggttaacgaaggcgatgttgtcgtttttggtaaatactcaggtcaaaatactatcgatatcgatggtgaagaattattgattttgaatgaaagtgatatctacggcgttttagaagcttaataa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z