BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_K2128002
1
BBa_K2128002
HDLEA3
2016-08-12T11:00:00Z
2016-08-13T11:25:38Z
H. Dujardini
This part is a member is a class of intrinsically disordered proteins called the Late Embryonic Abundant (LEA) proteins that become ordered when desiccated, thereby stabilizing DNA and protein cell components. It was taken from the genome of H. Dujardini and optimized by the IDT Codon Optimization Tool for E. Coli K12.
false
false
_2597_
32302
32302
9
false
This part has been optimized by the IDT Codon Optimization Tool for E. Coli K12.
false
David Sanderson
annotation2481452
1
HDLEA3_ORF
range2481452
1
1
528
BBa_K2128102
1
BBa_K2128102
Strong promoter/RBS for HDLEA3
2016-10-15T11:00:00Z
2016-10-16T11:53:00Z
The coding sequence of this composite part is a member of a class of intrinsically disordered proteins called the Late Embryonic Abundant (LEA) proteins that become ordered when desiccated, thereby stabilizing DNA and protein cell components. It was taken from the genome of H. Dujardini and optimized by the IDT Codon Optimization Tool for E. Coli K12.
A strong promoter and strong ribosome binding site were placed upstream of HDLEA3.
false
false
_2597_
31725
31725
9
false
We have attempted to maximize expression of HDLEA3.
false
Kathryn Flanagan
component2513044
1
BBa_K2128002
component2513042
1
BBa_K880005
annotation2513044
1
BBa_K2128002
range2513044
1
62
589
annotation2513042
1
BBa_K880005
range2513042
1
1
55
BBa_K880005
1
BBa_K880005
Strong promoter, strong RBS combination for high expression levels of proteins
2012-09-28T11:00:00Z
2015-05-08T01:13:40Z
It is a combination of strong promoter (J23100) and RBS (B0034).
Released HQ 2013
-J23100+B0034
-Strong promoter, strong RBS combination for high expression levels of proteins
Consensus constitutive promoter and RBS sequence-produces strongest possible expression.
false
false
_1142_
0
9403
9
In stock
false
Enter design considerations.
false
Josh Atkinson, Mike Ferguson, and Ben Parker
component2204230
1
BBa_B0034
component2204228
1
BBa_J23100
annotation2204228
1
BBa_J23100
range2204228
1
1
35
annotation2204230
1
BBa_B0034
range2204230
1
44
55
BBa_J23100
1
BBa_J23100
constitutive promoter family member
2006-08-03T11:00:00Z
2015-08-31T04:08:40Z
Isolated from library of promoters
Released HQ 2013
Replace later
false
true
_52_
0
483
95
In stock
true
N/A
true
John Anderson
BBa_J23100_sequence
1
ttgacggctagctcagtcctaggtacagtgctagc
BBa_B0034_sequence
1
aaagaggagaaa
BBa_K2128102_sequence
1
ttgacggctagctcagtcctaggtacagtgctagctactagagaaagaggagaaatactagatgcgtcaaggcattctgattgcgttcttcgtcgtcgcgttacttagcggagggtgtttagcaaaaaaagagaaaactgttacagaggctgctgaagaggtgctggaagacgtgaaagaggcagcgggggacgcctacaacgccgcgaagcacaaagtggaagattggaaagaggacgctgaggaaatgtacgaggatttggaggaaagtgcaaaggagcgttggacgcagacgcgccaccaagctaaggaagttaaggatagtgctgacaagaagtttcaagctgtcaaggagtccgtagaggataccgttgaagtggcaaaacaaaaggctgaagaacttaaaaagtcggctgagaaaaccgcgagcaaagtaaaggatgcggcgaaagaaaaattacgtgaggcaaagaaatcaacgcttaaagctgagaaaactttttttgatacattttgggattactacaataagttgacttcgttcgtccttatcaagtttaaggagatccgtaagcgtattggttattag
BBa_K2128002_sequence
1
atgcgtcaaggcattctgattgcgttcttcgtcgtcgcgttacttagcggagggtgtttagcaaaaaaagagaaaactgttacagaggctgctgaagaggtgctggaagacgtgaaagaggcagcgggggacgcctacaacgccgcgaagcacaaagtggaagattggaaagaggacgctgaggaaatgtacgaggatttggaggaaagtgcaaaggagcgttggacgcagacgcgccaccaagctaaggaagttaaggatagtgctgacaagaagtttcaagctgtcaaggagtccgtagaggataccgttgaagtggcaaaacaaaaggctgaagaacttaaaaagtcggctgagaaaaccgcgagcaaagtaaaggatgcggcgaaagaaaaattacgtgaggcaaagaaatcaacgcttaaagctgagaaaactttttttgatacattttgggattactacaataagttgacttcgttcgtccttatcaagtttaaggagatccgtaagcgtattggttattag
BBa_K880005_sequence
1
ttgacggctagctcagtcctaggtacagtgctagctactagagaaagaggagaaa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z