BBa_K2165000
1
BBa_K2165000
Violacein C gene codon-optimized for S. Cerevisiae
2016-10-13T11:00:00Z
2016-10-14T08:10:04Z
​VioC​ ​is​ ​originally​ ​from​ ​the​ violacein​ ​metabolic pathway​ ​in​ ​Chromobacterium​ ​Violaceum​, a type of Proteobacteria. The original vioC sequence for the bacteria chassis was submitted by the Alberta team and has been codon-optimized for use in yeast in this part.
This​ ​part​ ​is​ ​a​ ​codon​ ​optimized​ ​version​ ​for​ ​yeast​ ​of​ ​the​ ​violacein​ ​C (vioC)​ ​gene​ ​submitted​ ​by​ ​the​ ​Alberta
team​ ​in​ ​2013​ ​as​ ​K1161003 and is easy to insert in a custom violacein system.​ ​VioC​ ​is​ ​one​ ​of​ ​five​ ​genes​ ​in the violacein metabollic pathway that​ ​together​ ​produce​ ​the​ ​purple​ ​pigmented​ ​antibiotic, violacein,​ ​when​ ​expressed​ ​in​ ​yeast.
false
false
_2636_
28370
28370
9
false
The online codon-optimization tool offered by Integrated DNA Technologies (https://www.idtdna.com/CodonOpt) was used to codon-optimize this sequence for use in yeast. Combinations containing RFC 10 illegal restriction sites were actively avoided.
false
Roya Amini-Naieni
annotation2530822
1
VioC
range2530822
1
1
1296
BBa_K2165000_sequence
1
atgaaacgtgcaataattgttggagggggattagcaggtggcctaacagctatatacttagcaaagcgtggatacgaggtgcatgttgtagaaaaaaggggagacccgctgagagatttatcatcatatgtcgacgtcgtaagtagcagggcaatcggtgtatcaatgacagttagaggcataaagtctgttttggctgcggggattcccagggcggagcttgacgcttgtggagagcccattgttgctatggcatttagcgtgggtggtcagtaccgtatgcgtgaattgaaacctcttgaagacttcaggccgctttcactaaacagagcggcgttccagaaattacttaataagtacgcaaatcttgcgggggtgcgttattactttgagcataaatgtttagatgtagacctggacgggaaatctgtgttaatccaaggaaaggacgggcagccccaaaggctacaaggcgatatgatcattggggctgatggggcccactcagcggtacgtcaagctatgcaaagcgggctaagaaggttcgaatttcagcagaccttcttccgtcatgggtacaagacgctggtcttgcctgacgctcaggcgttggggtataggaaagacacactttatttttttggaatggacagtggaggattattcgcgggcagggccgctacaattccagacgggagtgtgagcatcgccgtttgtcttccttattctggatctcctagtttaaccacgacggacgagccgacaatgcgtgcattttttgacagatattttggggggctaccaagagatgcacgtgatgagatgctgcgtcagtttttagcgaagccgtcaaatgacttaatcaacgtaagatcaagtacgttccattataagggaaatgtgctattgttgggagacgcagcccacgcaaccgctccgtttttagggcaaggcatgaatatggcccttgaggatgcgagaacattcgtggagctgttggataggcatcagggcgaccaagataaagcttttccagagttcacagagctgcgtaaagtacaagccgatgcgatgcaggacatggcgcgtgcgaactacgatgtactgagctgtagtaaccccattttttttatgagggcaaggtacacgagatatatgcatagcaagtttcctggtctttatcccccagacatggccgaaaagctttacttcacctctgagccgtatgatcgtctacaacagattcagagaaagcagaatgtctggtataagattgggagagtcaatgggtcataa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z