BBa_K239001
1
BBa_K239001
Spy promoter, activated by Phosporylated CpxR, BaeR and Sigma70
2009-06-21T11:00:00Z
2015-05-08T01:11:36Z
Genomic sequence from biocyc, Escherichia coli K-12. Native unmodified sequence.
Sequence contains 2 phosphorylated BaeR binding sites, 1 phosphorylated CpxR binding site and transcription is initiated by sigma factor 70.
Function: Can detect various periplasmic stresses.
Area of application: Hopefully it can be used to detect presence of relevant unfolded proteins in the periplasmic space, to detect shear stress or other so far undefined relevant stress.
false
false
_375_
0
4247
9
It's complicated
true
Detect and remove possible restriction sites: XbaI, EcoRI, PstI, SpeI, AgeI, BamHI, BglII, NogMIV, NotI and XhoI. No restriction site had to be removed. Sequence starts 3 bp before the first BaeR binding site and ends 5 pb after the -10 box.
false
Axel Nystrom
annotation2006307
1
BaeR
range2006307
1
4
22
annotation2006309
1
CpxR
range2006309
1
107
120
annotation2006305
1
-10
range2006305
1
150
157
annotation2006306
1
-35
range2006306
1
128
136
annotation2006308
1
BaeR
range2006308
1
66
81
BBa_K239001_sequence
1
agttcttcataatctctgcaaaatcatcgtgttgtaatattctctcatcactctccatcaaattttctttttttctccataattggcgcaaaagtgttttttacactttcattgttttaccgttgctctgattaattgacgctaaagtcagtaaagttaatc
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z