BBa_K239006
1
BBa_K239006
Modified NarK promoter
2009-06-25T11:00:00Z
2015-05-08T01:11:36Z
Raw genomic sequence from biocyc, Escherichia coli K-12, but modified.
Sequence contains 2 Fnr (one of which is modified), 1 Fis, 2 NarL binding sites and initiates transcription by RNAP sigma-70. Function: Switched on during anaerobic conditions. Area of application: Detection of when the cell is switching to anaerobic metabolism.
false
false
_375_
0
4247
9
It's complicated
false
Detect and remove possible restriction sites: XbaI, EcoRI, PstI, SpeI, AgeI, BamHI, BglII, NogMIV, NotI and XhoI. No restriction site had to be removed. Sequence starts 3 bp before the first FNR binding site and ends 6 pb after the -10 box. One pb has been changed in order optimise the first FNR binding site.
false
Axel Nystrom
annotation2006722
1
Fnr
range2006722
1
42
55
annotation2006725
1
NarL
range2006725
1
20
26
annotation2006724
1
Fnr
range2006724
1
4
17
annotation2006720
1
-10
range2006720
1
76
83
annotation2006723
1
Fis
range2006723
1
38
56
annotation2006726
1
NarL
range2006726
1
7
13
annotation2006721
1
-35
range2006721
1
48
56
BBa_K239006_sequence
1
gtattgataaatatcaatgatagataaagttatcttatcgtttgatttacatcaaattgcctttagctacagacactaaggtggcagac
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z