BBa_K242051
1
BBa_K242051
Essential region of P4 bacteriophage genome
2009-10-19T11:00:00Z
2015-05-08T01:11:37Z
This sequence comes from P4 bacteriophage genome from positions (0 to 18)+(4090 to 11624)
http://www.ncbi.nlm.nih.gov/nuccore/9627507?report=graph&from=1&to=9087
Bacteriophage P4 genome without the non-essential region nor the integrase gene.
The use of this part is similar to a plasmid. You can clone standard parts in this viral vector.
You can use this vector with a system for P4 production to encapsidate your constructions and transduce them.
false
false
_340_
0
3074
9
Not in stock
true
We remove all forbiden restriction sites, (EcoRI,XbaI,SpeI,PstI), from P4 genome but it means remove the integrase also.
For our project it was useful because removing the integrase gene we expect P4 to be maintained as a plasmid. However it could mean a reduction in the stability of the plasmid without selection.
false
Enrique Paz
annotation2057348
1
cos site
range2057348
1
7507
7560
BBa_K242051_sequence
1
ccggactcaaacatcaaaataagttaatgataaaaaacaaataataaaacacaacaatgaaatatgcccccttttgtgcccccactgtttttctgaccaatctattttcagcccatcaataaatcggaaagttaaatcatttttaatcagtaagtttggatccgtagctcggatccaaaccagtgcatcttttatccacataaaaaattttttttcgaaagaactgttcacactgttcacctttctgttttctccttttatttcagagtgataggtggtgaataatgggtgaagggtgaacattcgattcttcacctccggcattctgccgatgtgactcataccggtgattaatcctccgcactgaaatcactcaggaagaaaaaagttttttttgatttgattgttcacactgttcacctttcgtttttctcttttaatttcagtgtgataacgggtgaatatacggtgaagggtgaacagtggattgttcaccttcgggggatatcgggataaaaaaagaccggcagatgccggtcaggtgggtcaggctgttgtagggtcgtcacattttggcagccagtcgccgtagctttcctctttcagcgtcaggttggtctgtatcccctgtttggtatggcgtttctcgtaattcagtccgtattccttcagcatcaccggcagccccagcccgaacattttcagactgagtacattccggtagccgtttgcctccatgtaggccagataggcgtgatagaggtatttacggtaattgcgcgggatgatactggcgttccccatatacatgccgctggtctgcggcagggtttccagatagccgataaaatcaaacgtcgggtcggcatcccgtttgatgttcagtgcctcgtctgagttctgctgggactgaagcagtgaccgggcgagcatcgggtcgctgaacttctgcatcaggtgacgcacgatgaccgccagctcgcgggtgattttgtccttaagctgcgggtcgcgctcctgcggggctatctgttccgggaagtgaataatcacccgtcggcgtgacacgccgccgctgcggtcggtgaagcgcatcgggttattgttcacggccagaatcaccgccgggatgtgcgtggagtacgcatcccggtatttcgggtcaacggacaccgcatcgccgccggtgatggccttgagtccggcaccgtcgccgctccatttttcctggtccggcaggcgtatcagtgagaagccagttaacgcggcacgttcacgcggggattccagcgtctcgatggtggccgacgtggcgttatcctccccggccagcagggtggctatttcggccatgatacttttgccgctgccgccgggaccggtcacctccagaaagagctgccagtcgtagcggtttgccagcaccataaacagtgcagccagaatcacgtcgcgtttttccgcacggccaccggcggcacggtcaagccagcgccagaaggcgggggcgtgggtttccagcgtttcaccgtccaccggcggggtgaaatccacatcgcacagggtgcgcatccagtgtgacggactgtgcgggtggaacgtgccgttctgcgtgtcgagcacgccgttacgaaagccaatcaggcggcgggagggggcttcctgctgcggaataatcagcttcagggtatccaccacggaggccaccttcccggaggagaacggcgcacgcagacgctgaaacagcccggccacatcccgggcaaagtcctgtggcggcagcaccttccagacaccattttcatagcgggacagaagctggccgttggcatcgaccgcgagcgcctcgccgtaatgctcatagatacgcatggccttttcgctggtactcatggcggaaaactccgcttcgctcatggtgtcgaacgggctttcagccggtggccggatggcatcgtaaatggccttacgggtggcctccccgccgtactgcgtgaaggcatcattccagtcaccgaagaccggcggcagggcaacaacaccttcacacgcatctgcggctgcggcggcttttttctggccgtcaccactgaggtcacggtcagcggcaaggacaatctgacaggcggggtgcttctgccgggcaaggctggccagagaaaggaggttcacggaagaaagcgccaccatcaccgtttcaccggtcaggtgatgtacggtaagtgcggtcgcgtatccctccgctatccacagacgttttccggcctgattctgtccttcaagggtgtgacaggtgcccctgacctgtccgcctttcagggtgcgcttacggccgtcagcactgattaactgaaggttaaccagttcgccgctgtcgtcatacagtggcaccacaaggtcaccggcgcgccagctcacgccaccggctctgtgtgtgccggtcagcatccggcattcccggccgggaaagcccttgcgggtcaggtaggcgttaccggttccggtacgggttttcgccatcagggtttgtgccagtgcggcggcgttcttccgggcagcgtctgtttcatcaacggcggcggtcgtcactgccgggtcagccggtggcaggctgccggtcacggcagccacctttgcggccgcgtcggacggggaaacaccaaaaaccttttcaaccagtttcaggccgtcaccggcaccacactgattgcagtaccaggtgccgcgcccctccctgtcatcaaaacggaagcggtcactcccgccacagaccggacagggctgatgacggttcttcagcacctgaatccccagcgccgggagaatacgcggccagtggccgagcgcatggctgacggtggcggttacgttcattttcatggtgttgttctccttcagtgcagtaccggcgcttttatgtgacgggcacagagttcatccatcacaaccagcccgagaaaggacagcgacggcgcggccttcagggggccggattccattaaatcttccagcagggcacaggctatctgacgccctttttcctcaccgtgctggcgcagataaaagccttccagctcagcggcgatggccgcctccagtgactcaagggtgagatgcgggtagcggtgctgacgttcgcacacggtcagccaggcacaggcgacagcgcgacggtaaagggcagcgcgtaagacgggcggtaagggtgttttcatttgcttttctccctgtgacagatgactgcattccgtgccggttgcattaactgataaggcatatctgcgtctcctgaagacgtgcgtatccctgcgcgaatacgcacatttaatttttcgggggtcgttttttaattacagataattgcggtaactgttatccggggtggtttccgggtcaggctccgtgcggggaatttcccgccattcccgcgccaccggtgctgcccggctgaccggaacagtgtcctgcgggtaaatatccagatatttttcccgccatttctgtaattccgggtctccggccatttctttcagtaccgcatgccggtttacggggctgcgtttaaacaggtcaggacggtcacaggtaaattcccgcagaaaacgccccagcgggatgtctgtggtgcgtccgtcagcgaggatacgcacaaggatactgaatttacggcggtacgggttccagacaatgtccgggcagcggtacggcatttcccacggaataccgtcttccagaatgccgaccacggccacatcgggaaaaccggcagaacggtaaatctcaccgggctggggaaaatcaaacatgcgtcctgtctccccggtctttctgctgggcgagaaaatcgcggcacaggcctttggctttcagctcattcagcacaaaatcaatatcttcattcaggtagctgaaaatatgtggaatgtagagctgatgcaggccggagagttcacggtgaatcaaatcacccccaacaaaccgggatacggcgctggcgcggttgagcttatggtaagcctcaatgctgaggtgttcacgggcgtcatgacgcgctgagacggtctgaggggcttttttattacgcacgggacacctccaccaccggcagacgggcagcaagggagagcacatagtcacggacaagggaacggcgggcactgcgttcatcaccggcgacggtgcgaagcatacagatacggggatgacggtctgcgcgacggacagccgcaaacacaaagacaaattcagggtgtgagggggtaagggttgtagccatgatggcagcctcctgtgaatagcaaataacgctatcgccggagttctcacgctcgatggcgatagcccagacgggggtgagaataccggcttcacaggataccggccagcccggaggctgccccgcctgagctaccattgactctgcggcataatgagcggacgcgggcaggatgcacggaatgccatctgcacgactgaccacacaccacaccataatctggcgctctgtggcattgattgcgacacaaaaaaagacgcgtggcgcgtcatatgtcgcctgtgaattgctcgggttctcacgcccggctgccgattttgcggcaggcgaaaaactatatccgcaaatgccggaaaaaggcaagccagaaaaagggagtttttgcagagcgggcatcatcatgcgtcgtacccccgtttgcgtccggcaatgcgtccggccatccatgcggtgacttcagagtgcagccaggccacatttttaccgccaagactcacctgcggcggaaattcccccttacggatgagttcgtagatggtcgagcgtgacaggccgcacaggtgcatcacttccggcacacgtaaaaaacgctcctgcgtgatgtccggcagcggcatcagtggcgtcactggggcgggagacggggaagaaaaaacagcttgcatcgggctacctcgttaatgtccatacagcaccggataagtccgtccggcttcgggtagcgctttattttgtgaatattttcagcagacgcaacaggggggatttgttcaggctgtcttacaatggctgtgtgttttttgttcatctccacttaaagtcatttaaagccacttaaagcaatttgtaatttttatagtgaaatacaaatcgtttcttcttattcattcccggcgaattaataaaaacaaacagtagtaaacagcacaaaaagcccatcaacgggtgaacagtggtgaacagacggtgaacagtcattactgcgattgttcaccctttaacttactgtattacttatcttttttattaaggtgaacagaggtgaacagtaaaatataaaaaaacaaacagtaagccggtttttcctgcgaccttttcctggcttgccggtctgaggatgagtctcctgtgtcagggctggcacatctgcaatgcgtcgtgttgttgtccggtgtacgtcacaattttcttaacctgaagtgacgaggagccggaaaatgtctgaccacactatccctgaatatctgcaacccgcactggcacaactggaaaaggccagagccgcccatcttgagaacgcccgcctgatggatgagaccgtcacggccattgaacgggcagagcaggaaaaaaatgcgctggcgcaggccgacggaaacgacgctgacgactggcgcacggcctttcgtgcagccggtggtgtcctgagcgacgagctgaaacagcgccacattgagcgcgtggcacgccgggagctggtacaggaatatgacaatctggccgtggtgctgaatttcgaacgtgaacgcctgaaaggggcgtgtgacagcacggccaccgcctaccggaaggcacatcatcaccttctgagtctgtatgcagagcatgagctggaacacgccctgaatgaaacctgtgaggcgcttgtccgggcaatgcatctgagcattctggtacaggaaaatccgctcgccaacaccaccggccatcagggctacgtcgcaccggaaaaggctgtcatgcagcaggtgaaatcatcgctggaacagaaaattaaacagatgcaaatcagcctcaccggcgagccggttctccggctgaccggactgtcagcggcaacactcccgcacatggattatgaggtggcaggcacaccggcacagcgcaaggtgtggcaggacaaaatagaccagcagggagcagagcttaaggccagagggctgctgtcatgatttactgtccgtcgtgtggacatgttgctcacacccgtcgcgcacatttcatggacgatggcaccaagataatgattgcacagtgccggaatatttattgctctgcgacatttgaagcgagtgaaagctttttctctgacagtaaagattcaggaatggaatacatttcaggcaaacagagataccgcgattcactgacgtcagcctcctgcggtatgaaacgcccgaaaagaatgcttgttaccggatattgttgtcggagatgtaaaggccttgcactgtcaagaacatcgcggcgtctgtctcaggaagtcaccgagcgtttttatgtgtgcacggatccgggctgtggtctggtgtttaaaacgcttcagaccatcaaccgcttcattgtccgcccggtcacgccggacgaactggcagaacgcctgcatgaaaaacaggaactgccgccagtacggttaaaaacacaatcatattcgctgcgtctggaatgagggctgccggttaacaccggccgtcgccgcacaccgtatttttattcttcagcatgatgagaaagagataacgatggaaagcacagccttacagcaggcctttgacacctgtcagaataacaaagcagcatggctgcaacgcaaaaatgagctggcagcggccgaacaggaatatctgcggcttctgtcaggagaaggcagaaacgtcagtcgcctggacgaattacgcaatattatcgaagtcagaaaatggcaggtgaatcaggccgccggtcgttatattcgttcgcatgaagccgttcagcacatcagcatccgcgaccggctgaatgattttatgcagcagcacggcacagcactggcggccgcactggcaccggagctgatgggctacagtgagctgacggccattgcccgaaactgtgccatacagcgtgccacagatgccctgcgtgaagcccttctgtcctggcttgcgaagggtgaaaaaattaattattccgcacaggatagcgacattttaacgaccatcggattcaggcctgacgtggcttcggtggatgacagccgtgaaaaattcacccctgcgcagaacatgattttttcgcgtaaaagtgcgcaactggcatcacgtcagtcagtgtaaaattccccgaaaatccgcccgtttttactgaaaaaagccatgcatcgataaggtgcatggctttgcatgcgttttcctgcctcattttctgcaaaccgcgccattcccggcgcggtctgagcgtgtcagtgcaactgcattaaaaccgccccgcaaagcgggcgggcgaggcggggaaagcaccgcgcgcaaaccgacaagttagttaattatttgtgtagtcaaagtgccttcagtacatacctcgttaatacattggagcataatgaagaaaatctatgg
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z